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PDB: 59 results

7UJD
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BU of 7ujd by Molmil
PSMD2 Structure bound to MC1 and Fab8/14
Descriptor: 26S proteasome non-ATPase regulatory subunit 2, ACY-PHE-PRO-ASP-VAL-SAR-LEU-HIS-ARG-TYR-TRP-GLY-TRP-ASP-CYS-GLY-NH2, Fab 14 HC CDRs, ...
Authors:Johnson, M.C, Bashore, C, Ciferri, C, Dueber, E.C.
Deposit date:2022-03-30
Release date:2023-01-11
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Targeted degradation via direct 26S proteasome recruitment.
Nat.Chem.Biol., 19, 2023
7UIH
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BU of 7uih by Molmil
PSMD2 Structure
Descriptor: 26S proteasome non-ATPase regulatory subunit 2, Fab 14 HC CDRs, Fab 14 LC CDRs, ...
Authors:Johnson, M.C, Bashore, C, Ciferri, C, Dueber, E.C.
Deposit date:2022-03-29
Release date:2023-01-11
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Targeted degradation via direct 26S proteasome recruitment.
Nat.Chem.Biol., 19, 2023
6U8N
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BU of 6u8n by Molmil
Human IMPDH2 treated with ATP, IMP, and NAD+. Fully extended filament segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-05
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UDQ
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BU of 6udq by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Fully compressed filament end reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-19
Release date:2020-03-25
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6U8E
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BU of 6u8e by Molmil
Human IMPDH2 treated with ATP, IMP, and NAD+. Filament assembly interface reconstruction.
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-04
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UDO
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BU of 6udo by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Fully compressed filament segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-19
Release date:2020-03-25
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UDP
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BU of 6udp by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Filament assembly interface reconstruction.
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-19
Release date:2020-03-25
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UA4
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BU of 6ua4 by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Bent (3/4 compressed, 1/4 extended) segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-10
Release date:2020-03-25
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6U8R
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BU of 6u8r by Molmil
Human IMPDH2 treated with ATP, IMP, and NAD+. Bent (1/4 compressed, 3/4 extended) segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-05
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6U9O
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BU of 6u9o by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Fully compressed filament segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-09
Release date:2020-03-25
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UA5
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BU of 6ua5 by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Free interfacial octamer reconstruction.
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-10
Release date:2020-03-25
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6U8S
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BU of 6u8s by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Filament assembly interface reconstruction.
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-05
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UA2
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BU of 6ua2 by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Bent (2/4 compressed, 2/4 extended) segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-10
Release date:2020-03-25
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UAJ
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BU of 6uaj by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Free canonical octamer reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-10
Release date:2020-03-25
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UC2
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BU of 6uc2 by Molmil
Human IMPDH2 treated with ATP and 2 mM GTP. Free canonical octamer reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase 2
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-13
Release date:2020-03-25
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (4.48 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6OIG
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BU of 6oig by Molmil
Subunit joining exposes nascent pre-40S rRNA for processing and quality control
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Rai, J, Parker, M.D, Ghalei, H, Johnson, M.C, Karbstein, K, Stroupe, M.E.
Deposit date:2019-04-09
Release date:2020-09-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7.
Rna, 27, 2021
8VGI
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BU of 8vgi by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.2DS
Descriptor: Fab E104.v1.2DS heavy chain, Fab E104.v1.2DS light chain, Tryptase alpha/beta-1
Authors:Kung, J.E, Johnson, M.C, Sudhamsu, J.
Deposit date:2023-12-27
Release date:2024-10-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
8VGH
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BU of 8vgh by Molmil
CryoEM structure of tryptase in complex with wild type anti-tryptase Fab E104.v1
Descriptor: Fab E104.v1 heavy chain, Fab E104.v1 light chain, Tryptase alpha/beta-1
Authors:Kung, J.E, Johnson, M.C, Sudhamsu, J.
Deposit date:2023-12-27
Release date:2024-10-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
8VGJ
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BU of 8vgj by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.4DS
Descriptor: Fab E104.v1.4DS heavy chain, Fab E104.v1.4DS light chain, Tryptase alpha/beta-1
Authors:Kung, J.E, Johnson, M.C, Sudhamsu, J.
Deposit date:2023-12-27
Release date:2024-10-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
8VGK
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BU of 8vgk by Molmil
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.6DS
Descriptor: Fab E104.v1.6DS light chain, Tryptase alpha/beta-1
Authors:Kung, J.E, Johnson, M.C, Sudhamsu, J.
Deposit date:2023-12-27
Release date:2024-10-30
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
7NO8
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BU of 7no8 by Molmil
Structure of the mature RSV CA lattice: Group I, pentamer-hexamer interface, class 1"6
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021
7NOM
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BU of 7nom by Molmil
Structure of the mature RSV CA lattice: Group IV, hexamer-hexamer interface, class 4'Beta
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021
7NOG
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BU of 7nog by Molmil
Structure of the mature RSV CA lattice: Group III, hexamer-hexamer interface, class 4'5
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021
7NO0
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BU of 7no0 by Molmil
Structure of the mature RSV CA lattice: T=1 CA icosahedron
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021
7NOB
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BU of 7nob by Molmil
Structure of the mature RSV CA lattice: Group II, hexamer-hexamer interface, class 2'6
Descriptor: Capsid protein p27, alternate cleaved 1
Authors:Obr, M, Ricana, C.L, Nikulin, N, Feathers, J.-P.R, Klanschnig, M, Thader, A, Johnson, M.C, Vogt, V.M, Schur, F.K.M, Dick, R.A.
Deposit date:2021-02-25
Release date:2021-04-21
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.
Nat Commun, 12, 2021

 

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