Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6634 results

6XP9
DownloadVisualize
BU of 6xp9 by Molmil
STRUCTURE OF HUMAN PREGNANE X RECEPTOR LIGAND BINDING DOMAIN BOUND TETHERED WITH SRC co-activator peptide IN COMPLEX WITH (S,S)-1
Descriptor: (2S)-tert-butoxy[7-(8-fluoro-5-methyl-3,4-dihydro-2H-1-benzopyran-6-yl)-5-methyl-2-phenylpyrazolo[1,5-a]pyrimidin-6-yl]acetic acid, GLYCEROL, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 fusion
Authors:Khan, J.A.
Deposit date:2020-07-08
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-based amelioration of PXR transactivation in a novel series of macrocyclic allosteric inhibitors of HIV-1 integrase.
Bioorg.Med.Chem.Lett., 30, 2020
6VRH
DownloadVisualize
BU of 6vrh by Molmil
Cryo-EM structure of the wild-type human serotonin transporter complexed with paroxetine and 8B6 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
Authors:Coleman, J.A, Navratna, V, Yang, D.
Deposit date:2020-02-07
Release date:2020-03-11
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
2VNH
DownloadVisualize
BU of 2vnh by Molmil
X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH NADP. FORM II AT 2.27 ANGSTROMS RESOLUTION
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH:FERREDOXIN REDUCTASE, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2008-02-05
Release date:2008-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Coenzyme Binding and Hydride Transfer in Rhodobacter Capsulatus Ferredoxin/Flavodoxin Nadp(H) Oxidoreductase.
Biochim.Biophys.Acta, 1794, 2009
6Z67
DownloadVisualize
BU of 6z67 by Molmil
FtsE structure of Streptococcus pneumoniae in complex with AMPPNP at 2.4 A resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division ATP-binding protein FtsE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Alcorlo, M, Straume, D, Havarstein, L.S, Hermoso, j.A.
Deposit date:2020-05-28
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Characterization of the Essential Cell Division Protein FtsE and Its Interaction with FtsX in Streptococcus pneumoniae.
Mbio, 11, 2020
6ZCU
DownloadVisualize
BU of 6zcu by Molmil
syk in complex with 57262_SYKB-AZ13344324-2
Descriptor: 6-chloro-2-(2-fluoro-4,5-dimethoxyphenyl)-N-(piperidin-4-ylmethyl)-3H-imidazo[4,5-b]pyridin-7-amine, Tyrosine-protein kinase SYK
Authors:Read, J.A, Patel, J.
Deposit date:2020-06-12
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
To Be Published
6ZCP
DownloadVisualize
BU of 6zcp by Molmil
SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
Descriptor: 7-[[4-[4-[(dimethylamino)methyl]pyrazol-1-yl]pyrimidin-2-yl]amino]-~{N},3-dimethyl-imidazo[1,5-a]pyridine-1-carboxamide, Tyrosine-protein kinase SYK
Authors:Read, J.A.
Deposit date:2020-06-11
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 4
To Be Published
6ZCX
DownloadVisualize
BU of 6zcx by Molmil
SYK Kinase domain in complex with azabenzimidazole inhibitor 18
Descriptor: Tyrosine-protein kinase SYK, ~{N},1-dimethyl-5-[[4-[3-methyl-4-[[(3~{R})-piperidin-3-yl]amino]pyrazol-1-yl]pyrimidin-2-yl]amino]indazole-3-carboxamide
Authors:Read, J.A.
Deposit date:2020-06-12
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 18
To Be Published
6ZCQ
DownloadVisualize
BU of 6zcq by Molmil
SYK Kinase domain in complex with diamine inhibitor 5
Descriptor: 7-[[4-[4-[[(3~{R},4~{R})-3-azanyloxan-4-yl]amino]pyrazol-1-yl]pyrimidin-2-yl]amino]-~{N},3-dimethyl-imidazo[1,5-a]pyridine-1-carboxamide, Tyrosine-protein kinase SYK
Authors:Read, J.A.
Deposit date:2020-06-11
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:SYK Kinase domain in complex with diamine inhibitor 5
To Be Published
6ZCS
DownloadVisualize
BU of 6zcs by Molmil
SYK Kinase domain in complex with azabenzimidazole inhibitor 3
Descriptor: (3~{R},4~{R})-~{N}4-[1-[2-(1-methylindol-4-yl)-3~{H}-imidazo[4,5-b]pyridin-7-yl]pyrazol-4-yl]oxane-3,4-diamine, Tyrosine-protein kinase SYK
Authors:Read, J.A.
Deposit date:2020-06-12
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 3
To Be Published
6ZCR
DownloadVisualize
BU of 6zcr by Molmil
SYK Kinase domain in complex with azabenzimidazole inhibitor 7
Descriptor: 6-chloro-2-(2-fluoro-4,5-dimethoxyphenyl)-N-(piperidin-4-ylmethyl)-3H-imidazo[4,5-b]pyridin-7-amine, Tyrosine-protein kinase SYK
Authors:Read, J.A, Patel, J.
Deposit date:2020-06-12
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 7
To Be Published
6ZC0
DownloadVisualize
BU of 6zc0 by Molmil
SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
Descriptor: Tyrosine-protein kinase SYK, ~{N},~{N}-dimethyl-1-[1-[2-(1-methylindol-4-yl)-3~{H}-imidazo[4,5-b]pyridin-7-yl]pyrazol-4-yl]methanamine
Authors:Read, J.A.
Deposit date:2020-06-09
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 2b
To Be Published
6ZCY
DownloadVisualize
BU of 6zcy by Molmil
SYK Kinase domain in complex with diamine inhibitor 16
Descriptor: Tyrosine-protein kinase SYK, ~{N},1-dimethyl-5-[[4-[3-methyl-4-[[(3~{R})-pyrrolidin-3-yl]amino]pyrazol-1-yl]pyrimidin-2-yl]amino]indazole-3-carboxamide
Authors:Read, J.A.
Deposit date:2020-06-12
Release date:2021-06-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:SYK Kinase domain in complex with azabenzimidazole inhibitor 16
To Be Published
7P92
DownloadVisualize
BU of 7p92 by Molmil
TmHydABC- T. maritima bifurcating hydrogenase with bridge domain up
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Fe-hydrogenase, ...
Authors:Furlan, C, Chongdar, N, Gupta, P, Lubitz, W, Ogata, H, Blaza, J.N, Birrell, J.A.
Deposit date:2021-07-23
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insight on the mechanism of an electron-bifurcating [FeFe] hydrogenase.
Elife, 11, 2022
7P8N
DownloadVisualize
BU of 7p8n by Molmil
TmHydABC- T. maritima hydrogenase with bridge closed
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Fe-hydrogenase, ...
Authors:Furlan, C, Chongdar, N, Gupta, P, Lubitz, W, Ogata, H, Blaza, J.N, Birrell, J.A.
Deposit date:2021-07-23
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insight on the mechanism of an electron-bifurcating [FeFe] hydrogenase.
Elife, 11, 2022
7P91
DownloadVisualize
BU of 7p91 by Molmil
TmHydABC- T. maritima bifurcating hydrogenase with bridge domain closed
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Fe-hydrogenase, ...
Authors:Furlan, C, Chongdar, N, Gupta, P, Lubitz, W, Ogata, H, Blaza, J.N, Birrell, J.A.
Deposit date:2021-07-23
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insight on the mechanism of an electron-bifurcating [FeFe] hydrogenase.
Elife, 11, 2022
7P5H
DownloadVisualize
BU of 7p5h by Molmil
TmHydABC- D2 map
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Fe-hydrogenase, ...
Authors:Furlan, C, Chongdar, N, Gupta, P, Lubitz, W, Ogata, H, Blaza, J.N, Birrell, J.A.
Deposit date:2021-07-14
Release date:2022-09-14
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural insight on the mechanism of an electron-bifurcating [FeFe] hydrogenase.
Elife, 11, 2022
7OXW
DownloadVisualize
BU of 7oxw by Molmil
CrabP2 mutant R30DK31D
Descriptor: ACETATE ION, Cellular retinoic acid-binding protein 2, SULFATE ION
Authors:Pastok, M.W, Basle, A, Endicott, J.A.
Deposit date:2021-06-23
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structural requirements for the specific binding of CRABP2 to cyclin D3
To Be Published
7OZH
DownloadVisualize
BU of 7ozh by Molmil
PMCA-amplified alpha-synuclein fibril polymorph, Multiple System Atrophy patient-derived seeds
Descriptor: Alpha-synuclein
Authors:Frieg, B, Geraets, J.A, Schroeder, G.F.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:alpha-synuclein polymorphism determines oligodendroglial dysfunction
To Be Published
7OZT
DownloadVisualize
BU of 7ozt by Molmil
Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
Descriptor: Camelid nanobody NB09, Cyclin-dependent kinase inhibitor 2A
Authors:Pastok, M.W, Burbidge, O, Itzhaki, L, Endicott, J.A, Noble, M.E.M.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
To Be Published
7OZG
DownloadVisualize
BU of 7ozg by Molmil
PMCA-amplified alpha-synuclein fibril polymorph, Parkinson's Disease patient-derived seeds
Descriptor: Alpha-synuclein
Authors:Frieg, B, Geraets, J.A, Schroeder, G.F.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:alpha-synuclein polymorphism determines oligodendroglial dysfunction
To Be Published
6Z63
DownloadVisualize
BU of 6z63 by Molmil
FtsE structure from Streptococus pneumoniae in complex with ADP at 1.57 A resolution (spacegroup P 21)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division ATP-binding protein FtsE
Authors:Alcorlo, M, Straume, D, Havarstein, L.S, Hermoso, J.A.
Deposit date:2020-05-27
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Characterization of the Essential Cell Division Protein FtsE and Its Interaction with FtsX in Streptococcus pneumoniae.
Mbio, 11, 2020
7P4A
DownloadVisualize
BU of 7p4a by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression.
Descriptor: Sri, Stl
Authors:Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R.
Deposit date:2021-07-10
Release date:2022-07-27
Last modified:2022-11-16
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
6XLQ
DownloadVisualize
BU of 6xlq by Molmil
Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the CTX-2026 Fab
Descriptor: Butyrophilin subfamily 3 member A1, CTX-2026 Heavy Chain, CTX-2026 Light Chain
Authors:Payne, K.K, Mine, J.A, Biswas, S, Chaurio, R.A, Perales-Puchalt, A, Anadon, C.M, Costich, T.L, Harro, C.M, Walrath, J, Ming, Q, Tcyganov, E, Buras, A.L, Rigolizzo, K.E, Mandal, G, Lajoie, J, Ophir, M, Tchou, J, Marchion, D, Luca, V.C, Bobrowicz, P, McLaughlin, B, Eskiocak, U, Schmidt, M, Cubillos-Ruiz, J.R, Rodriguez, P.C, Gabrilovich, D.I, Conejo-Garcia, J.R.
Deposit date:2020-06-29
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:BTN3A1 governs antitumor responses by coordinating alpha beta and gamma delta T cells.
Science, 369, 2020
7UN7
DownloadVisualize
BU of 7un7 by Molmil
DNA Polymerase lambda in complex with a 1nt microhomology substrate
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), ...
Authors:Jamsen, J.A.
Deposit date:2022-04-09
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Pol lambda promotes microhomology-mediated end-joining.
Nat.Struct.Mol.Biol., 30, 2023
6ZSL
DownloadVisualize
BU of 6zsl by Molmil
Crystal structure of the SARS-CoV-2 helicase at 1.94 Angstrom resolution
Descriptor: PHOSPHATE ION, SARS-CoV-2 helicase NSP13, ZINC ION
Authors:Newman, J.A, Yosaatmadja, Y, Douangamath, A, Arrowsmith, C.H, von Delft, F, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2020-07-15
Release date:2020-07-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase.
Nat Commun, 12, 2021

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon