Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42254 results

8TYQ
DownloadVisualize
BU of 8tyq by Molmil
Structure of the C-terminal half of LRRK2 bound to GZD-824 (G2019S mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, Designed Ankyrin Repeats Protein E11, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-25
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
8TXZ
DownloadVisualize
BU of 8txz by Molmil
Structure of C-terminal LRRK2 bound to MLi-2
Descriptor: (2~{R},6~{S})-2,6-dimethyl-4-[6-[5-(1-methylcyclopropyl)oxy-1~{H}-indazol-3-yl]pyrimidin-4-yl]morpholine, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Sanz-Murillo, M, Villagran-Suarez, A, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-24
Release date:2023-12-06
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
6SF3
DownloadVisualize
BU of 6sf3 by Molmil
Bone morphogenetic protein 10 (BMP10) in complex with extracellular domain of activin receptor-like kinase 1 (ALK1) at 2.3 Angstrom
Descriptor: Bone morphogenetic protein 10, Serine/threonine-protein kinase receptor R3
Authors:Guo, J, Yu, M, Li, W.
Deposit date:2019-07-31
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.30000663 Å)
Cite:Molecular basis of ALK1-mediated signalling by BMP9/BMP10 and their prodomain-bound forms.
Nat Commun, 11, 2020
6SF2
DownloadVisualize
BU of 6sf2 by Molmil
Ternary complex of human bone morphogenetic protein 9 (BMP9) growth factor domain, its prodomain and extracellular domain of activin receptor-like kinase 1 (ALK1).
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Growth/differentiation factor 2, Serine/threonine-protein kinase receptor R3
Authors:Salmon, R.M, Guo, J, Yu, M, Li, W.
Deposit date:2019-07-31
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular basis of ALK1-mediated signalling by BMP9/BMP10 and their prodomain-bound forms.
Nat Commun, 11, 2020
8TZE
DownloadVisualize
BU of 8tze by Molmil
Structure of C-terminal half of LRRK2 bound to GZD-824
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
6SCJ
DownloadVisualize
BU of 6scj by Molmil
The structure of human thyroglobulin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thyroglobulin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Coscia, F, Turk, D, Lowe, J.
Deposit date:2019-07-24
Release date:2020-02-12
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The structure of human thyroglobulin.
Nature, 578, 2020
7YSN
DownloadVisualize
BU of 7ysn by Molmil
Tubulin heterodimer structure of GMPCPP state in solution
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Tubulin alpha-1B chain, ...
Authors:Zhou, J, Wang, H.-W.
Deposit date:2022-08-12
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into the mechanism of GTP initiation of microtubule assembly.
Nat Commun, 14, 2023
7YSP
DownloadVisualize
BU of 7ysp by Molmil
Tubulin heterodimer structure of GDP-2 state in solution
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Tubulin alpha-1B chain, ...
Authors:Zhou, J, Wang, H.-W.
Deposit date:2022-08-12
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insights into the mechanism of GTP initiation of microtubule assembly.
Nat Commun, 14, 2023
8TZF
DownloadVisualize
BU of 8tzf by Molmil
Structure of full length LRRK2 bound to GZD-824 (I2020T mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2, ...
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
7YSQ
DownloadVisualize
BU of 7ysq by Molmil
GTPgammaS Tube decorated with kinesin
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Tubulin alpha chain, ...
Authors:Zhou, J, Wang, H.-W.
Deposit date:2022-08-12
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Structural insights into the mechanism of GTP initiation of microtubule assembly.
Nat Commun, 14, 2023
8TZC
DownloadVisualize
BU of 8tzc by Molmil
Structure of C-terminal LRRK2 bound to MLi-2 (G2019S mutant)
Descriptor: (2~{R},6~{S})-2,6-dimethyl-4-[6-[5-(1-methylcyclopropyl)oxy-1~{H}-indazol-3-yl]pyrimidin-4-yl]morpholine, E11 DARPin, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sanz-Murillo, M, Villagran-Suarez, A, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
7YSO
DownloadVisualize
BU of 7yso by Molmil
Tubulin heterodimer structure of GDP-1 state in solution
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Tubulin alpha-1B chain, ...
Authors:Zhou, J, Wang, H.-W.
Deposit date:2022-08-12
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into the mechanism of GTP initiation of microtubule assembly.
Nat Commun, 14, 2023
7YSR
DownloadVisualize
BU of 7ysr by Molmil
GTPgammaS MT decorated with kinesin
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Tubulin alpha chain, ...
Authors:Zhou, J, Wang, H.-W.
Deposit date:2022-08-12
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural insights into the mechanism of GTP initiation of microtubule assembly.
Nat Commun, 14, 2023
6AVF
DownloadVisualize
BU of 6avf by Molmil
Crystal structure of the KFJ5 TCR-NY-ESO-1-HLA-B*07:02 complex
Descriptor: ALA-PRO-ARG-GLY-PRO-HIS-GLY-GLY-ALA-ALA-SER-GLY-LEU, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Gully, B.S, Gras, S, Rossjohn, J.
Deposit date:2017-09-02
Release date:2018-02-28
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Divergent T-cell receptor recognition modes of a HLA-I restricted extended tumour-associated peptide.
Nat Commun, 9, 2018
8TZB
DownloadVisualize
BU of 8tzb by Molmil
Structure of the C-terminal half of LRRK2 bound to GZD-824 (I2020T mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, Leucine-rich repeat serine/threonine-protein kinase 2, designed ankyrin repeat proteins E11
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
7UVO
DownloadVisualize
BU of 7uvo by Molmil
Pfs230 domain 1 bound by RUPA-38 Fab
Descriptor: CHLORIDE ION, Gametocyte surface protein P230, ISOPROPYL ALCOHOL, ...
Authors:Ivanochko, D, Newton, J, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
7UVH
DownloadVisualize
BU of 7uvh by Molmil
Pfs230 domain 1 bound by RUPA-32 Fab
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AMMONIUM ION, ...
Authors:Ivanochko, D, Newton, J, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
7YP1
DownloadVisualize
BU of 7yp1 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
Descriptor: 10E4 heavy chain, 10E4 light chain, EBV gH, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
8HFQ
DownloadVisualize
BU of 8hfq by Molmil
Cryo-EM structure of CpcL-PBS from cyanobacterium Synechocystis sp. PCC 6803
Descriptor: C-phycocyanin alpha subunit, C-phycocyanin beta subunit, Ferredoxin--NADP reductase, ...
Authors:Zheng, L, Zhang, Z, Wang, H, Zheng, Z, Gao, N, Zhao, J.
Deposit date:2022-11-11
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM and femtosecond spectroscopic studies provide mechanistic insight into the energy transfer in CpcL-phycobilisomes.
Nat Commun, 14, 2023
7YOY
DownloadVisualize
BU of 7yoy by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
Descriptor: 3E8 heavy chain, 3E8 light chain, 5E3 heavy chain, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YP2
DownloadVisualize
BU of 7yp2 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)
Descriptor: 6H2 heavy chain, 6H2 light chain, Envelope glycoprotein H
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7UVI
DownloadVisualize
BU of 7uvi by Molmil
Pfs230 domain 1 bound by RUPA-55 Fab
Descriptor: Gametocyte surface protein P230, RUPA-55 Fab heavy chain, RUPA-55 Fab light chain
Authors:Ivanochko, D, Newton, J, Julien, J.P.
Deposit date:2022-05-02
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230.
Immunity, 56, 2023
8HE7
DownloadVisualize
BU of 8he7 by Molmil
ADP-ribosyltransferase 1 (PARP1) catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Descriptor: 1-[[4-fluoranyl-3-(3-oxidanylidene-4-pentan-3-yl-piperazin-1-yl)carbonyl-phenyl]methyl]quinazoline-2,4-dione, Poly [ADP-ribose] polymerase 1, processed C-terminus, ...
Authors:Wang, X.Y, Zhou, J, Xu, B.L.
Deposit date:2022-11-07
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of Quinazoline-2,4(1 H ,3 H )-dione Derivatives Containing a Piperizinone Moiety as Potent PARP-1/2 Inhibitors─Design, Synthesis, In Vivo Antitumor Activity, and X-ray Crystal Structure Analysis.
J.Med.Chem., 66, 2023
8HE8
DownloadVisualize
BU of 8he8 by Molmil
Human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Descriptor: 1-[[4-fluoranyl-3-(3-oxidanylidene-4-pentan-3-yl-piperazin-1-yl)carbonyl-phenyl]methyl]quinazoline-2,4-dione, GLYCEROL, Poly [ADP-ribose] polymerase 2
Authors:Wang, X.Y, Xu, B.L, Zhou, J.
Deposit date:2022-11-07
Release date:2023-11-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Discovery of Quinazoline-2,4(1 H ,3 H )-dione Derivatives Containing a Piperizinone Moiety as Potent PARP-1/2 Inhibitors─Design, Synthesis, In Vivo Antitumor Activity, and X-ray Crystal Structure Analysis.
J.Med.Chem., 66, 2023
6MD2
DownloadVisualize
BU of 6md2 by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Arachidonic acid
Descriptor: 2-chloro-5-nitro-N-phenylbenzamide, ARACHIDONIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Shang, J, Kojetin, D.J.
Deposit date:2018-09-03
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon