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PDB: 42391 results

6LVC
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Structure of Dimethylformamidase, dimer
Descriptor: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
Authors:Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R.
Deposit date:2020-02-02
Release date:2020-06-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.
Angew.Chem.Int.Ed.Engl., 59, 2020
3TN9
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X-ray structure of the HRV2 empty capsid (B-particle)
Descriptor: Protein VP1, Protein VP2, Protein VP3
Authors:Garriga, D, Pickl-Herk, A, Luque, D, Wruss, J, Caston, J.R, Blaas, D, Verdaguer, N.
Deposit date:2011-09-01
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into minor group rhinovirus uncoating: the X-ray structure of the HRV2 empty capsid.
Plos Pathog., 8, 2012
4ZY7
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Crystal structure of a Mycobacterial protein
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Uncharacterized protein MSMEG_5817
Authors:Shahine, A, Rossjohn, J, Beddoe, T.
Deposit date:2015-05-21
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a Mycobacterial protein
To Be Published
2PKP
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Crystal structure of 3-isopropylmalate dehydratase (leuD)from Methhanocaldococcus Jannaschii DSM2661 (MJ1271)
Descriptor: DI(HYDROXYETHYL)ETHER, Homoaconitase small subunit, ZINC ION
Authors:Jeyakanthan, J, Gayathri, D.R, Velmurugan, D, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-18
Release date:2008-04-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit
Biochemistry, 49, 2010
4ZV8
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Structure of CYP2B6 (Y226H/K262R) with additional mutation Y244W in complex with alpha-Pinene
Descriptor: (+)-alpha-Pinene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
Authors:Liu, J, Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2015-05-18
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations.
Biochemistry, 55, 2016
2PUS
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BU of 2pus by Molmil
Unprecedented activation mechanism of a non-canonical RNA-dependent RNA polymerase
Descriptor: IBDV VP1 RNA-dependant RNA polymerase
Authors:Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
Deposit date:2007-05-09
Release date:2007-11-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Activation mechanism of a noncanonical RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PVH
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BU of 2pvh by Molmil
Structure-Based Design of Pyrazolo[1,5-a][1,3,5]triazine Derivatives as Potent Inhibitors of Protein Kinase CK2
Descriptor: Casein kinase II subunit alpha, N,N'-DIPHENYLPYRAZOLO[1,5-A][1,3,5]TRIAZINE-2,4-DIAMINE
Authors:Nie, Z, Perretta, C, Erickson, P, Margosiak, S, Almassy, R, Lu, J, Averill, A, Yager, K.M, Chu, S.
Deposit date:2007-05-09
Release date:2008-05-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based design, synthesis, and study of pyrazolo[1,5-a][1,3,5]triazine derivatives as potent inhibitors of protein kinase CK2.
Bioorg.Med.Chem.Lett., 17, 2007
6LZL
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BU of 6lzl by Molmil
Crystal structure of human dihydroorotate dehydrogenase (DHODH) with Piperine
Descriptor: (2E,4E)-5-(2H-1,3-benzodioxol-5-yl)-1-(piperidin-1-yl)penta-2,4-dien-1-one, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
Authors:Liu, Z.H, Wu, D, Lu, W.Q, Huang, J.
Deposit date:2020-02-19
Release date:2020-04-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of human dihydroorotate dehydrogenase (DHODH) with Piperine
To Be Published
6M1W
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BU of 6m1w by Molmil
Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase
Descriptor: Amidohydrolase, CHLORIDE ION, FE (III) ION, ...
Authors:Hibi, M, Mikami, B, Ogawa, J.
Deposit date:2020-02-26
Release date:2021-01-06
Last modified:2021-01-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes.
Commun Biol, 4, 2021
5A67
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BU of 5a67 by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form B)
Descriptor: MANGANESE (II) ION, TRIPHOSPHATE, TRIPHOSPHATE TUNEL METALLOENZYME 3
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A5Y
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Crystal structure of AtTTM3 in complex with tripolyphosphate and magnesium ion (form A)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, TRIPHOSPHATE, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
4ZRU
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BU of 4zru by Molmil
X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (Ls-AChBP) in complex with 3-[2-[(2S)-pyrrolidin-2-yl]ethynyl]pyridine (TI-5180)
Descriptor: 3-[(2S)-pyrrolidin-2-ylethynyl]pyridine, Acetylcholine-binding protein, PHOSPHATE ION
Authors:Bobango, J, Sankaran, B, Park, J.F, Wu, J, Talley, T.T.
Deposit date:2015-05-12
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs, and Structural Features of a High-Affinity, Non-selective NNR Ligand-AChBP Co-crystal Structure
To be Published
4TYM
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BU of 4tym by Molmil
Crystal structure of purine nucleoside phosphorylase from Streptococcus agalactiae 2603V/R, NYSGRC Target 030935
Descriptor: Purine nucleoside phosphorylase DeoD-type, SULFATE ION
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-07-08
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Crystal structure of purine nucleoside phosphorylase from Streptococcus agalactiae 2603V/R, NYSGRC Target 030935.
To Be Published
5A7T
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BU of 5a7t by Molmil
Crystal structure of Sulfolobus acidocaldarius Trm10 at 2.4 angstrom resolution.
Descriptor: DI(HYDROXYETHYL)ETHER, TRNA (ADENINE(9)-N1)-METHYLTRANSFERASE
Authors:Van Laer, B, Roovers, M, Wauters, L, Kasprzak, J, Dyzma, M, Deyaert, E, Feller, A, Bujnicki, J, Droogmans, L, Versees, W.
Deposit date:2015-07-09
Release date:2016-01-13
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Functional Insights Into tRNA Binding and Adenosine N1-Methylation by an Archaeal Trm10 Homologue.
Nucleic Acids Res., 44, 2016
5A8F
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BU of 5a8f by Molmil
Structure and genome release mechanism of human cardiovirus Saffold virus-3
Descriptor: GENOME POLYPHUMAN SAFFOLD VIRUS-3 VP3 PROTEIN, HUMAN SAFFOLD VIRUS-3 VP1, HUMAN SAFFOLD VIRUS-3 VP2
Authors:Mullapudi, E, Novacek, J, Palkova, L, Kulich, P, Lindberg, M, vanKuppeveld, F.J.M, Plevka, P.
Deposit date:2015-07-15
Release date:2016-06-08
Last modified:2019-10-30
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and Genome Release Mechanism of Human Cardiovirus Saffold Virus-3.
J.Virol., 90, 2016
5A25
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BU of 5a25 by Molmil
Rational engineering of a mesophilic carbonic anhydrase to an extreme halotolerant biocatalyst
Descriptor: CARBONIC ANHYDRASE 2, GLYCEROL, SODIUM ION, ...
Authors:Warden, A, Newman, J, Peat, T.S, Seabrook, S, Williams, M, Dojchinov, G, Haritos, V.
Deposit date:2015-05-12
Release date:2015-05-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational Engineering of a Mesohalophilic Carbonic Anhydrase to an Extreme Halotolerant Biocatalyst.
Nat.Commun., 6, 2015
5A3I
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BU of 5a3i by Molmil
Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN, ...
Authors:Xiong, X, Corti, D, Liu, J, Pinna, D, Foglierini, M, Calder, L.J, Martin, S.R, Lin, Y.P, Walker, P.A, Collins, P.J, Monne, I, Suguitan Jr, A.L, Santos, C, Temperton, N.J, Subbarao, K, Lanzavecchia, A, Gamblin, S.J, Skehel, J.J.
Deposit date:2015-06-01
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structures of Complexes Formed by H5 Influenza Hemagglutinin with a Potent Broadly Neutralizing Human Monoclonal Antibody.
Proc.Natl.Acad.Sci.USA, 112, 2015
5ACS
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BU of 5acs by Molmil
Y233A-Investigation of the impact from residues W228 and Y233 in the metallo-beta-lactamase GIM-1
Descriptor: GIM-1 PROTEIN, ZINC ION
Authors:Skagseth, S, Carlsen, T.J, Bjerga, G.E.K, Spencer, J, Samuelsen, O, Leiros, H.-K.S.
Deposit date:2015-08-17
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.459 Å)
Cite:Role of Residues W228 and Y233 in the Structure and Activity of Metallo-Beta-Lactamase Gim-1.
Antimicrob.Agents Chemother., 60, 2015
4U26
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BU of 4u26 by Molmil
Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Noeske, J, Huang, J, Olivier, N.B, Giacobbe, R.A, Zambrowski, M, Cate, J.H.D.
Deposit date:2014-07-16
Release date:2014-07-30
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Synergy of streptogramin antibiotics occurs independently of their effects on translation.
Antimicrob.Agents Chemother., 58, 2014
1A3E
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BU of 1a3e by Molmil
COMPLEX OF HUMAN ALPHA-THROMBIN WITH THE BIFUNCTIONAL BORONATE INHIBITOR BOROLOG2
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), BOROLOG2, ...
Authors:Skordalakes, E, Elgendy, S, Goodwin, C.A, Green, D, Scullly, M.F, Kakkar, V.V, Freyssinet, J.M, Dodson, G, Deadman, J.
Deposit date:1998-01-21
Release date:1998-06-03
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bifunctional peptide boronate inhibitors of thrombin: crystallographic analysis of inhibition enhanced by linkage to an exosite 1 binding peptide.
Biochemistry, 37, 1998
4ZXF
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BU of 4zxf by Molmil
Crystal Structure of a Soluble Variant of Monoglyceride Lipase from Saccharomyces Cerevisiae in Complex with a Substrate Analog
Descriptor: 1-{3-[(R)-hydroxy(octadecyloxy)phosphoryl]propyl}triaza-1,2-dien-2-ium, Monoglyceride lipase, NITRATE ION, ...
Authors:Aschauer, P, Lichtenegger, J, Rengachari, S, Gruber, K, Oberer, M.
Deposit date:2015-05-20
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the Saccharomyces cerevisiae monoglyceride lipase Yju3p.
Biochim.Biophys.Acta, 1861, 2016
5A0M
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BU of 5a0m by Molmil
THE CRYSTAL STRUCTURE OF I-SCEI IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MN
Descriptor: 5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP)-3', 5'-D(*CP*AP*GP*GP*GP*TP*AP*AP*TP*AP*CP)-3', 5'-D(*CP*CP*CP*TP*AP*GP*CP*GP*TP)-3', ...
Authors:Prieto, J, Redondo, P, Merino, N, Villate, M, Blanco, F.J, Molina, R.
Deposit date:2015-04-21
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the I-Scei Nuclease Complexed with its DsDNA Target and Three Catalytic Metal Ions.
Acta Crystallogr.,Sect.F, 72, 2016
5A03
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BU of 5a03 by Molmil
Crystal structure of aldose-aldose oxidoreductase from Caulobacter crescentus complexed with xylose
Descriptor: 1,4-DIETHYLENE DIOXIDE, ALDOSE-ALDOSE OXIDOREDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Taberman, H, Rouvinen, J, Parkkinen, T.
Deposit date:2015-04-17
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:Structure and Function of Caulobacter Crescentus Aldose-Aldose Oxidoreductase.
Biochem.J., 472, 2015
4ZTK
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BU of 4ztk by Molmil
Transpeptidase domain of FtsI4 D,D-transpeptidase from Legionella pneumophila.
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Cell division protein FtsI/penicillin binding protein 2
Authors:CUFF, M, OSIPIUK, J, WU, R, ENDRES, M, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-05-14
Release date:2015-05-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Transpeptidase domain of FtsI4 D,D-transpeptidase from Legionella pneumophila.
to be published
4ZTV
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BU of 4ztv by Molmil
Non-anthranilate-like inhibitor (TAMU-A7) complexed with anthranilate phosphoribosyltransferase (trpD) from Mycobacterium tuberculosis in absence of PRPP
Descriptor: 4,4,4-trifluoro-1-(4-methoxyphenyl)butane-1,3-dione, Anthranilate phosphoribosyltransferase
Authors:Evans, G.L, Eom, J, Baker, E.N, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-05-15
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Bioactive non-anthranilate-like fragment-like inhibitor provides alternative starting point for inhibitor design against anthranilate phosphoribosyl transferase from Mycobacterium tuberculosis.
To be Published

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