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PDB: 100 results

1HJ9
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BU of 1hj9 by Molmil
Atomic resolution structures of trypsin provide insight into structural radiation damage
Descriptor: ANILINE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Leiros, H.-K.S, McSweeney, S.M, Smalas, A.O.
Deposit date:2001-01-10
Release date:2002-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
1HJ8
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1.00 AA Trypsin from Atlantic Salmon
Descriptor: BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:Leiros, H.-K.S, Mcsweeney, S.M, Smalas, A.O.
Deposit date:2001-01-09
Release date:2002-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
8PEA
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BU of 8pea by Molmil
OXA-48_F72L. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: Beta-lactamase, CHLORIDE ION
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution.
To Be Published, 2024
8PEC
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BU of 8pec by Molmil
OXA-48_Q5-CAZ. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, Beta-lactamase, CHLORIDE ION
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution.
To Be Published, 2024
8PEB
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OXA-48_Q5. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution.
To Be Published, 2024
8BHX
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BU of 8bhx by Molmil
High resolution structure of the iron Superoxide Dismutase from Thermobifida fusca
Descriptor: BORIC ACID, FE (III) ION, Superoxide dismutase
Authors:Leiros, H.-K.S, Sorlie, M.
Deposit date:2022-11-01
Release date:2023-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Initial characterization of an iron superoxide dismutase from Thermobifida fusca.
J.Biol.Inorg.Chem., 28, 2023
2JH3
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BU of 2jh3 by Molmil
The crystal structure of DR2241 from Deinococcus radiodurans at 1.9 A resolution reveals a multi-domain protein with structural similarity to chelatases but also with two additional novel domains
Descriptor: IRON/SULFUR CLUSTER, RIBOSOMAL PROTEIN S2-RELATED PROTEIN
Authors:Leiros, H.-K.S, Mcsweeney, S.M.
Deposit date:2007-02-20
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of Dr2241 from Deinococcus Radiodurans at 1.9 A Resolution Reveals a Multi-Domain Protein with Structural Similarity to Chelatases But Also with Two Additional Novel Domains
J.Struct.Biol., 159, 2007
7OBN
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Structural investigations of a new L3 DNA ligase: structure-function analysis
Descriptor: ADENOSINE MONOPHOSPHATE, DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), DNA ligase, ...
Authors:Leiros, H.-K.S, Williamson, A.
Deposit date:2021-04-23
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Bacteriophage origin of some minimal ATP-dependent DNA ligases: a new structure from Burkholderia pseudomallei with striking similarity to Chlorella virus ligase.
Sci Rep, 11, 2021
1UTM
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BU of 1utm by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: 2-PHENYLETHYLAMINE, CALCIUM ION, TRYPSIN I
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-09
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTN
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BU of 1utn by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZYLAMINE, CALCIUM ION, ...
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
4AOV
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BU of 4aov by Molmil
DpIDH-NADP. The complex structures of Isocitrate dehydrogenase from Clostridium thermocellum and Desulfotalea psychrophila, support a new active site locking mechanism
Descriptor: ISOCITRATE DEHYDROGENASE [NADP], ISOCITRIC ACID, MAGNESIUM ION, ...
Authors:Leiros, H.-K.S, Fedoy, A.-E, Leiros, I, Steen, I.H.
Deposit date:2012-03-30
Release date:2012-07-11
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The Complex Structures of Isocitrate Dehydrogenase from Clostridium Thermocellum and Desulfotalea Psychrophila Suggest a New Active Site Locking Mechanism
FEBS Open Bio., 2, 2012
4D1W
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BU of 4d1w by Molmil
A H224Y mutant for VIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4D1V
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BU of 4d1v by Molmil
A F218Y mutant of VIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4D1U
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BU of 4d1u by Molmil
A D120A mutant of VIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
4D1T
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BU of 4d1t by Molmil
High resolution structure of native tVIM-7 from Pseudomonas aeruginosa
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Leiros, H.-K.S, Skagseth, S, Edvardsen, K.S.W, Lorentzen, M.S, Bjerga, G.E.K, Leiros, I, Samuelsen, O.
Deposit date:2014-05-05
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:His224 Alters the R2 Drug Binding Site and Phe218 Influences the Catalytic Efficiency in the Metallo-Beta-Lactamase Vim-7.
Antimicrob.Agents Chemother., 58, 2014
1UTO
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BU of 1uto by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: 2-PHENYLETHYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTJ
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BU of 1utj by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: BENZYLAMINE, CALCIUM ION, TRYPSIN I
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTK
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BU of 1utk by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: CALCIUM ION, SULFATE ION, TRYPSIN I
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTP
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BU of 1utp by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: 4-PHENYLBUTYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTL
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BU of 1utl by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-PHENYLPROPYLAMINE, CALCIUM ION, ...
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1UTQ
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BU of 1utq by Molmil
Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: CALCIUM ION, GLYCEROL, TRYPSINOGEN
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
2V28
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BU of 2v28 by Molmil
Apo structure of the cold active phenylalanine hydroxylase from Colwellia psychrerythraea 34H
Descriptor: PHENYLALANINE-4-HYDROXYLASE, SULFATE ION
Authors:Leiros, H.-K.S, Pey, A.L, Innselset, M, Moe, E, Leiros, I, Steen, I.H, Martinez, A.
Deposit date:2007-06-04
Release date:2007-06-19
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Phenylalanine Hydroxylase from Colwellia Psychrerythraea 34H, a Monomeric Cold Active Enzyme with Local Flexibility Around the Active Site and High Overall Stability.
J.Biol.Chem., 282, 2007
2V27
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BU of 2v27 by Molmil
Structure of the cold active phenylalanine hydroxylase from Colwellia psychrerythraea 34H
Descriptor: FE (III) ION, PHENYLALANINE HYDROXYLASE, SULFATE ION
Authors:Leiros, H.-K.S, Pey, A.L, Innselset, M, Moe, E, Leiros, I, Steen, I.H, Martinez, A.
Deposit date:2007-06-03
Release date:2007-06-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Phenylalanine Hydroxylase from Colwellia Psychrerythraea 34H, a Monomeric Cold Active Enzyme with Local Flexibility Around the Active Site and High Overall Stability.
J.Biol.Chem., 282, 2007
2VPA
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BU of 2vpa by Molmil
High resolution crystal structure of the antibiotic resistance protein NimA from Deinococcus radiodurans
Descriptor: ACETATE ION, NIMA-RELATED PROTEIN, PYRUVIC ACID
Authors:Leiros, H.-K.S, Tedesco, C, McSweeney, S.M.
Deposit date:2008-02-27
Release date:2008-08-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-Resolution Structure of the Antibiotic Resistance Protein Nima from Deinococcus Radiodurans.
Acta Crystallogr.,Sect.F, 64, 2008
4UWO
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BU of 4uwo by Molmil
Native di-zinc VIM-26. Leu224 in VIM-26 from Klebsiella pneumoniae has implications for drug binding.
Descriptor: GLYCEROL, METALLO-BETA-LACTAMASE VIM-26, SODIUM ION, ...
Authors:Leiros, H.-K.S, Edvardsen, K.S.W, Bjerga, G.E.K, Samuelsen, O.
Deposit date:2014-08-14
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.555 Å)
Cite:Structural and Biochemical Characterization of Vim-26 Show that Leu224 Has Implications for the Substrate Specificity of Vim Metallo-Beta-Lactamases.
FEBS J., 282, 2015

 

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