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PDB: 42880 results

7T6I
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BU of 7t6i by Molmil
Crystal structure of HLA-DP1 in complex with pp65 peptide in reverse orientation
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ...
Authors:Lim, J.J, Reid, H, Rossjohn, J.
Deposit date:2021-12-13
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human T cells recognize HLA-DP-bound peptides in two orientations.
Proc.Natl.Acad.Sci.USA, 119, 2022
6NZJ
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BU of 6nzj by Molmil
Structural Analysis of a Nitrogenase Iron Protein from Methanosarcina acetivorans: Implications for CO2 Capture by a Surface-Exposed [Fe4S4] Cluster
Descriptor: IRON/SULFUR CLUSTER, Nitrogenase iron protein, SULFATE ION
Authors:Rettberg, L.A, Kang, W, Stiebritz, M.T, Hiller, C.J, Lee, C.C, Liedtke, J, Ribbe, M.W, Hu, Y.
Deposit date:2019-02-13
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Analysis of a Nitrogenase Iron Protein from Methanosarcina acetivorans: Implications for CO 2 Capture by a Surface-Exposed [Fe 4 S 4 ] Cluster.
Mbio, 10, 2019
7TCV
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BU of 7tcv by Molmil
VDAC K12E mutant
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Voltage-dependent anion-selective channel protein 1
Authors:Khan, F, Abramson, J.
Deposit date:2021-12-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Dynamical control of the mitochondrial beta-barrel channel VDAC by electrostatic and mechanical coupling
To Be Published
4GWB
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BU of 4gwb by Molmil
Crystal structure of putative Peptide methionine sulfoxide reductase from Sinorhizobium meliloti 1021
Descriptor: CALCIUM ION, CHLORIDE ION, Peptide methionine sulfoxide reductase MsrA 3
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Zenchek, W, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-01
Release date:2012-09-19
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of putative Peptide methionine sulfoxide reductase from Sinorhizobium meliloti 1021
To be Published
4HOH
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BU of 4hoh by Molmil
RIBONUCLEASE T1 (THR93ALA MUTANT) COMPLEXED WITH 2'GMP
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
Authors:Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J.
Deposit date:1998-09-14
Release date:1998-09-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dissection of the structural and functional role of a conserved hydration site in RNase T1.
Protein Sci., 8, 1999
8AME
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BU of 8ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SA16H
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
5T30
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BU of 5t30 by Molmil
Human MnSOD-azide complex
Descriptor: AZIDE ION, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Azadmanesh, J, Trickel, S.R, Kolar, C.H, Lovelace, J.J, Borgstahl, G.E.O.
Deposit date:2016-08-24
Release date:2017-05-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Substrate-analog binding and electrostatic surfaces of human manganese superoxide dismutase.
J. Struct. Biol., 199, 2017
6O3C
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BU of 6o3c by Molmil
Crystal structure of active Smoothened bound to SAG21k, cholesterol, and NbSmo8
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-chloro-4,7-difluoro-N-{[2-methoxy-5-(pyridin-4-yl)phenyl]methyl}-N-[trans-4-(methylamino)cyclohexyl]-1-benzothiophene-2-carboxamide, ...
Authors:Deshpande, I.S, Liang, J, Hedeen, D, Roberts, K.J, Zhang, Y, Ha, B, Latorraca, N.R, Faust, B, Dror, R.O, Beachy, P.A, Myers, B.R, Manglik, A.
Deposit date:2019-02-26
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Smoothened stimulation by membrane sterols drives Hedgehog pathway activity.
Nature, 571, 2019
4HP3
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BU of 4hp3 by Molmil
Crystal structure of Tet3 in complex with a CpG dsDNA
Descriptor: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3'), LOC100036628 protein, UNKNOWN ATOM OR ION, ...
Authors:Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2012-10-23
Release date:2012-12-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development.
Cell(Cambridge,Mass.), 151, 2012
6O1P
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BU of 6o1p by Molmil
Cryo-EM structure of full length TRPV5 in nanodisc
Descriptor: Transient receptor potential cation channel subfamily V member 5
Authors:Dang, S, van Goor, M.K, Asarnow, D, Wang, Y, Julius, D, Cheng, Y, van der Wijst, J.
Deposit date:2019-02-21
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insight into TRPV5 channel function and modulation.
Proc.Natl.Acad.Sci.USA, 116, 2019
5T55
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BU of 5t55 by Molmil
LECTIN FROM BAUHINIA FORFICATA IN COMPLEX WITH GLOBOTETRAOSE
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2016-08-30
Release date:2016-12-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.
FEBS J., 284, 2017
3F5K
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BU of 3f5k by Molmil
Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, GLYCEROL, ...
Authors:Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
Deposit date:2008-11-03
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
5T5L
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BU of 5t5l by Molmil
LECTIN FROM BAUHINIA FORFICATA IN COMPLEX WITH TN-PEPTIDE
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2016-08-31
Release date:2016-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.
FEBS J., 284, 2017
2X36
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BU of 2x36 by Molmil
Structure of the proteolytic domain of the Human Mitochondrial Lon protease
Descriptor: LON PROTEASE HOMOLOG, MITOCHONDRIAL
Authors:Garcia, J, Ondrovicova, G, Blagova, E, Levdikov, V.M, Bauer, J.A, Kutejova, E, Wilkinson, A.J, Wilson, K.S.
Deposit date:2010-01-21
Release date:2010-05-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Catalytic Domain of the Human Mitochondrial Lon Protease: Proposed Relation of Oligomer Formation and Activity.
Protein Sci., 19, 2010
1AH1
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BU of 1ah1 by Molmil
CTLA-4, NMR, 20 STRUCTURES
Descriptor: CTLA-4, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Metzler, W.J, Bajorath, J, Fenderson, W, Shaw, S.-Y, Peach, R, Constantine, K.L, Naemura, J, Leytze, G, Lavoie, T.B, Mueller, L, Linsley, P.S.
Deposit date:1997-04-11
Release date:1998-04-15
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Solution structure of human CTLA-4 and delineation of a CD80/CD86 binding site conserved in CD28.
Nat.Struct.Biol., 4, 1997
7TAK
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BU of 7tak by Molmil
Structure of a NAT transporter
Descriptor: GUANINE, Putative membrane protein PurT
Authors:Weng, J, Zhou, X, Ren, Z, Chen, K, Zhou, M.
Deposit date:2021-12-21
Release date:2023-01-25
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.79828 Å)
Cite:Insight into the mechanism of H + -coupled nucleobase transport.
Proc.Natl.Acad.Sci.USA, 120, 2023
7T6E
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BU of 7t6e by Molmil
Cryo-EM of NBD-ffsy filaments (class 1)
Descriptor: NBD-ffsy peptide
Authors:Wang, F, Guo, J, Xu, B, Egelman, E.H.
Deposit date:2021-12-13
Release date:2023-01-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cell spheroid creation by transcytotic intercellular gelation.
Nat Nanotechnol, 18, 2023
7T90
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BU of 7t90 by Molmil
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S2 state
Descriptor: ACETYLCHOLINE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-17
Release date:2023-01-25
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
6NBN
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BU of 6nbn by Molmil
Structure of Aedes aegypti OBP22 in the complex with arachidonic acid
Descriptor: AAEL005772-PA, ARACHIDONIC ACID
Authors:Jones, D.N, Wang, J.
Deposit date:2018-12-07
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Aedes aegypti Odorant Binding Protein 22 selectively binds fatty acids through a conformational change in its C-terminal tail.
Sci Rep, 10, 2020
8A8X
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BU of 8a8x by Molmil
TRIM7 PRYSPRY in complex with a MNV1-NS3 peptide HDDFGLQ
Descriptor: E3 ubiquitin-protein ligase TRIM7, MNV1-NS3 C term peptide
Authors:Luptak, J.
Deposit date:2022-06-24
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:TRIM7 Restricts Coxsackievirus and Norovirus Infection by Detecting the C-Terminal Glutamine Generated by 3C Protease Processing.
Viruses, 14, 2022
2IAT
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BU of 2iat by Molmil
Crystal structure of squid ganglion DFPase W244L mutant
Descriptor: CALCIUM ION, Diisopropylfluorophosphatase
Authors:Scharff, E.I, Koepke, J, Fritzsch, G, Luecke, C, Rueterjans, H.
Deposit date:2006-09-08
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diisopropylfluorophosphatase from Loligo vulgaris
Structure, 9, 2001
7T8X
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BU of 7t8x by Molmil
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S1 state
Descriptor: ACETYLCHOLINE, Antibody fragment, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Xu, J, Wang, Q, Du, Y, Kobilka, B.K.
Deposit date:2021-12-17
Release date:2023-01-25
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural and dynamic insights into supra-physiological activation and allosteric modulation of a muscarinic acetylcholine receptor.
Nat Commun, 14, 2023
3VQ9
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BU of 3vq9 by Molmil
HIV-1 IN core domain in complex with 6-fluoro-1,3-benzothiazol-2-amine
Descriptor: 6-fluoro-1,3-benzothiazol-2-amine, POL polyprotein
Authors:Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J.
Deposit date:2012-03-20
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification?
J Biomol Screen, 18, 2013
5T52
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BU of 5t52 by Molmil
LECTIN FROM BAUHINIA FORFICATA IN COMPLEX WITH GALNAC
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2016-08-30
Release date:2016-12-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.
FEBS J., 284, 2017
3VQP
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BU of 3vqp by Molmil
HIV-1 IN core domain in complex with 2,3-dihydro-1,4-benzodioxin-5-ylmethanol
Descriptor: 2,3-dihydro-1,4-benzodioxin-5-ylmethanol, CADMIUM ION, CHLORIDE ION, ...
Authors:Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J.
Deposit date:2012-03-29
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification?
J Biomol Screen, 18, 2013

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