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PDB: 753 results

4KQE
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The mutant structure of the human glycyl-tRNA synthetase E71G
Descriptor: GLYCEROL, Glycine--tRNA ligase
Authors:Qin, X, Hao, Z, Tian, Q, Zhang, Z, Zhou, C, Xie, W.
Deposit date:2013-05-15
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.739 Å)
Cite:Large Conformational Changes of Insertion 3 in Human Glycyl-tRNA Synthetase (hGlyRS) during Catalysis
J.Biol.Chem., 291, 2016
2FF0
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BU of 2ff0 by Molmil
Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
Descriptor: CTGTGGCCCTGAGCC, GGCTCAGGGCCACAG, Steroidogenic factor 1, ...
Authors:Little, T.H, Zhang, Y, Matulis, C.K, Weck, J, Zhang, Z, Ramachandran, A, Mayo, K.E, Radhakrishnan, I.
Deposit date:2005-12-17
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Sequence-specific deoxyribonucleic Acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability.
Mol.Endocrinol., 20, 2006
8WX5
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BU of 8wx5 by Molmil
Cryo-EM structure of human SLC15A4 in complex with TASL (inward-facing open)
Descriptor: Solute carrier family 15 member 4, TASL (TASL-SLC15A4 fusion protein)
Authors:Ohto, U, Zhang, Z, Fujimura, A, Shimizu, T.
Deposit date:2023-10-27
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Cryo-EM structure of human SLC15A4 in complex with TASL (inward-facing open)
To Be Published
8X8O
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BU of 8x8o by Molmil
Cryo-EM structure of a bacteriophage tail- spike protein against Klebsiella pneumoniae K64,ORF41(K64-ORF41) in 5 mM EDTA
Descriptor: Probable tail spike protein
Authors:Xie, Y, Huang, T, Zhang, Z, Tao, X.
Deposit date:2023-11-27
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural and functional basis of bacteriophage K64-ORF41 depolymerase for capsular polysaccharide degradation of Klebsiella pneumoniae K64.
Int.J.Biol.Macromol., 265, 2024
8X8M
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BU of 8x8m by Molmil
Cryo-EM structure of a bacteriophage tail- spike protein against Klebsiella pneumoniae K64,ORF41(K64-ORF41)
Descriptor: Probable tail spike protein
Authors:Xie, Y, Huang, T, Zhang, Z, Tao, X.
Deposit date:2023-11-27
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:Structural and functional basis of bacteriophage K64-ORF41 depolymerase for capsular polysaccharide degradation of Klebsiella pneumoniae K64.
Int.J.Biol.Macromol., 265, 2024
1JOT
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BU of 1jot by Molmil
STRUCTURE OF THE LECTIN MPA COMPLEXED WITH T-ANTIGEN DISACCHARIDE
Descriptor: AGGLUTININ, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Lee, X, Thompson, A, Zhang, Z, Hoa, T.-T, Biesterfeldt, J, Ogata, C, Xu, L, Johnston, R.A.Z, Young, N.M.
Deposit date:1997-12-05
Release date:1998-12-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the complex of Maclura pomifera agglutinin and the T-antigen disaccharide, Galbeta1,3GalNAc.
J.Biol.Chem., 273, 1998
3OMH
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BU of 3omh by Molmil
Crystal structure of PTPN22 in complex with SKAP-HOM pTyr75 peptide
Descriptor: Src kinase-associated phosphoprotein 2, Tyrosine-protein phosphatase non-receptor type 22
Authors:Yu, X, Sun, J.-P, Zhang, S, Zhang, Z.-Y.
Deposit date:2010-08-26
Release date:2011-06-29
Last modified:2011-09-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate Specificity of Lymphoid-specific Tyrosine Phosphatase (Lyp) and Identification of Src Kinase-associated Protein of 55 kDa Homolog (SKAP-HOM) as a Lyp Substrate.
J.Biol.Chem., 286, 2011
5UAK
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BU of 5uak by Molmil
Dephosphorylated, ATP-free human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: Cystic fibrosis transmembrane conductance regulator
Authors:Liu, F, Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Molecular Structure of the Human CFTR Ion Channel.
Cell, 169, 2017
8JHB
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BU of 8jhb by Molmil
FZD6 Gs complex
Descriptor: Frizzled-6, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, F, Zhang, Z.
Deposit date:2023-05-23
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A framework for Frizzled-G protein coupling and implications to the PCP signaling pathways.
Cell Discov, 10, 2024
8JHI
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BU of 8jhi by Molmil
FZD3-Gs complex
Descriptor: Frizzled-3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, F, Zhang, Z.
Deposit date:2023-05-23
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A framework for Frizzled-G protein coupling and implications to the PCP signaling pathways.
Cell Discov, 10, 2024
8JH7
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BU of 8jh7 by Molmil
FZD6 in inactive state
Descriptor: Frizzled-6,Soluble cytochrome b562, anti-BRIL Fab Heavy chain, anti-BRIL Fab Light chain, ...
Authors:Xu, F, Zhang, Z.
Deposit date:2023-05-22
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A framework for Frizzled-G protein coupling and implications to the PCP signaling pathways.
Cell Discov, 10, 2024
8JHC
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BU of 8jhc by Molmil
FZD3 in inactive state
Descriptor: Frizzled-3,Soluble cytochrome b562, anti-BRIL Fab Heavy chain, anti-BRIL Fab Light chain, ...
Authors:Xu, F, Zhang, Z.
Deposit date:2023-05-23
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A framework for Frizzled-G protein coupling and implications to the PCP signaling pathways.
Cell Discov, 10, 2024
7E7Q
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BU of 7e7q by Molmil
Cryo-EM structure of human ABCA4 in ATP-bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xie, T, Zhang, Z.K, Gong, X.
Deposit date:2021-02-26
Release date:2021-06-30
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of substrate recognition and translocation by human ABCA4.
Nat Commun, 12, 2021
7E7I
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BU of 7e7i by Molmil
Cryo-EM structure of human ABCA4 in the apo state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Retinal-specific phospholipid-transporting ATPase ABCA4, ...
Authors:Xie, T, Zhang, Z.K, Gong, X.
Deposit date:2021-02-26
Release date:2021-06-30
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of substrate recognition and translocation by human ABCA4.
Nat Commun, 12, 2021
2QCJ
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BU of 2qcj by Molmil
Native Structure of Lyp
Descriptor: Tyrosine-protein phosphatase non-receptor type 22
Authors:Sun, J.P, Yu, X, Zhang, Z.Y.
Deposit date:2007-06-19
Release date:2007-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Lyp and its complex with a selective inhibitor
To be Published
2QCT
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BU of 2qct by Molmil
Structure of Lyp with inhibitor I-C11
Descriptor: 1,2-ETHANEDIOL, 6-HYDROXY-3-{(4R)-1-[4-(1-NAPHTHYLAMINO)-4-OXOBUTYL]-1,2,3-TRIAZOLIDIN-4-YL}-1-BENZOFURAN-5-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 22
Authors:Yu, X, Sun, J.P, Zhang, Z.Y.
Deposit date:2007-06-19
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Lyp and its complex with a selective inhibitor
To be Published
3H1K
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BU of 3h1k by Molmil
Chicken cytochrome BC1 complex with ZN++ and an iodinated derivative of kresoxim-methyl bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
Authors:Berry, E.A, Zhang, Z, Bellamy, H.D, Huang, L.S.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Crystallographic location of two Zn(2+)-binding sites in the avian cytochrome bc(1) complex
Biochim.Biophys.Acta, 1459, 2000
7VBT
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BU of 7vbt by Molmil
Crystal structure of RIOK2 in complex with CQ211
Descriptor: 8-(6-methoxypyridin-3-yl)-1-[4-piperazin-1-yl-3-(trifluoromethyl)phenyl]-5H-[1,2,3]triazolo[4,5-c]quinolin-4-one, Serine/threonine-protein kinase RIO2
Authors:Zhu, C, Zhang, Z.M.
Deposit date:2021-09-01
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54001474 Å)
Cite:Discovery of 8-(6-Methoxypyridin-3-yl)-1-(4-(piperazin-1-yl)-3-(trifluoromethyl)phenyl)-1,5-dihydro- 4H -[1,2,3]triazolo[4,5- c ]quinolin-4-one (CQ211) as a Highly Potent and Selective RIOK2 Inhibitor.
J.Med.Chem., 65, 2022
7XR4
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BU of 7xr4 by Molmil
Structure of human excitatory amino acid transporter 2 (EAAT2) in complex with glutamate
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, Excitatory amino acid transporter 2, ...
Authors:Zhao, Y, Zhang, Z.
Deposit date:2022-05-09
Release date:2022-06-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of ligand binding modes of human EAAT2.
Nat Commun, 13, 2022
7XR6
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BU of 7xr6 by Molmil
Structure of human excitatory amino acid transporter 2 (EAAT2) in complex with WAY-213613
Descriptor: (2S)-2-azanyl-4-[[4-[2-bromanyl-4,5-bis(fluoranyl)phenoxy]phenyl]amino]-4-oxidanylidene-butanoic acid, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ...
Authors:Zhao, Y, Zhang, Z.
Deposit date:2022-05-09
Release date:2022-06-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of ligand binding modes of human EAAT2.
Nat Commun, 13, 2022
6LGW
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BU of 6lgw by Molmil
Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH
Descriptor: Glycoprotein, scFv 523-11
Authors:Yang, F.L, Lin, S, Ye, F, Yang, J, Qi, J.X, Chen, Z.J, Lin, X, Wang, J.C, Yue, D, Cheng, Y.W, Chen, Z.M, Chen, H, You, Y, Zhang, Z.L, Yang, Y, Yang, M, Sun, H.L, Li, Y.H, Cao, Y, Yang, S.Y, Wei, Y.Q, Gao, G.F, Lu, G.W.
Deposit date:2019-12-06
Release date:2020-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9037 Å)
Cite:Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody.
Cell Host Microbe, 27, 2020
6LGX
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BU of 6lgx by Molmil
Structure of Rabies virus glycoprotein at basic pH
Descriptor: Glycoprotein,Glycoprotein,Glycoprotein
Authors:Yang, F.L, Lin, S, Ye, F, Yang, J, Qi, J.X, Chen, Z.J, Lin, X, Wang, J.C, Yue, D, Cheng, Y.W, Chen, Z.M, Chen, H, You, Y, Zhang, Z.L, Yang, Y, Yang, M, Sun, H.L, Li, Y.H, Cao, Y, Yang, S.Y, Wei, Y.Q, Gao, G.F, Lu, G.W.
Deposit date:2019-12-06
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody.
Cell Host Microbe, 27, 2020
6KZD
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BU of 6kzd by Molmil
Crystal structure of TRKc in complex with 3-((6-(4-aminophenyl)imidazo[1,2-a]pyrazin-3-yl)ethynyl)- N-(3-isopropyl-5-((4-methylpiperazin-1-yl)methyl)phenyl)-2- methylbenzamide
Descriptor: 3-[2-[6-(4-aminophenyl)imidazo[1,2-a]pyrazin-3-yl]ethynyl]-2-methyl-~{N}-[3-(4-methylpiperazin-1-yl)-5-propan-2-yl-phenyl]benzamide, NT-3 growth factor receptor, PHOSPHATE ION
Authors:Wang, Y, Zhang, Z.M.
Deposit date:2019-09-23
Release date:2019-10-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Design, synthesis and biological evaluation of 3-(imidazo[1,2-a]pyrazin-3-ylethynyl)-2-methylbenzamides as potent and selective pan-tropomyosin receptor kinase (TRK) inhibitors.
Eur.J.Med.Chem., 179, 2019
2YIN
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BU of 2yin by Molmil
STRUCTURE OF THE COMPLEX BETWEEN Dock2 AND Rac1.
Descriptor: DEDICATOR OF CYTOKINESIS PROTEIN 2, RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1
Authors:Kulkarni, K.A, Yang, J, Zhang, Z, Barford, D.
Deposit date:2011-05-16
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Multiple Factors Confer Specific Cdc42 and Rac Protein Activation by Dedicator of Cytokinesis (Dock) Nucleotide Exchange Factors.
J.Biol.Chem., 286, 2011
4KR2
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Glycyl-tRNA synthetase in complex with tRNA-Gly
Descriptor: ADENOSINE MONOPHOSPHATE, Gly-tRNA-CCC, Glycine--tRNA ligase
Authors:Qin, X, Hao, Z, Tian, Q, Zhang, Z, Zhou, C, Xie, W.
Deposit date:2013-05-16
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Cocrystal Structures of Glycyl-tRNA Synthetase in Complex with tRNA Suggest Multiple Conformational States in Glycylation
J.Biol.Chem., 289, 2014

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