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PDB: 1569 results

7XL4
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Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
7XL3
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BU of 7xl3 by Molmil
Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:He, D.W, You, L.L, Zhang, Y.
Deposit date:2022-04-21
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding.
Nat Commun, 13, 2022
3C3I
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BU of 3c3i by Molmil
Evolution of chlorella virus dUTPase
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
Authors:Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
Deposit date:2008-01-28
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
8ZMR
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Vesamicol-bound VAChT
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7, vesamicol
Authors:Zhang, Z, Zhang, Y, Dai, F, Zhang, Y.X, Lee, C.-H.
Deposit date:2024-05-23
Release date:2024-06-19
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into VAChT neurotransmitter recognition and inhibition.
Cell Res., 34, 2024
8J3V
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Structure of the transmembrane domain of human PD-L2
Descriptor: Programmed cell death 1 ligand 2
Authors:OuYang, B, Zhang, Y.
Deposit date:2023-04-18
Release date:2024-03-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Deciphering Cholesterol's Role in PD-L2 Stability: A Distinct Regulatory Mechanism From PD-L1.
J.Mol.Biol., 436, 2024
8ZMS
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Acetylcholine-bound VAChT
Descriptor: ACETYLCHOLINE, Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7
Authors:Zhang, Z, Zhang, Y, Dai, F, Zhang, Y.X, Lee, C.-H.
Deposit date:2024-05-23
Release date:2024-06-19
Last modified:2024-09-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into VAChT neurotransmitter recognition and inhibition.
Cell Res., 34, 2024
8IP0
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Cryo-EM structure of type I-B Cascade bound to a PAM-containing dsDNA target at 3.6 angstrom resolution
Descriptor: CRISPR associated protein Cas11b, DNA (41-MER), DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
Authors:Xiao, Y, Lu, M, Yu, C, Zhang, Y.
Deposit date:2023-03-13
Release date:2024-03-20
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and genome editing of type I-B CRISPR-Cas.
Nat Commun, 15, 2024
8JCB
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BU of 8jcb by Molmil
Vgamma5 Vdelta1 T cell receptor complex
Descriptor: T cell receptor delta variable 1,T cell receptor delta constant, T cell receptor gamma variable 5,T cell receptor gamma constant 1, T-cell surface glycoprotein CD3 delta chain, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-05-10
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8JC0
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V gamma9 V delta2 TCR and CD3 complex in LMNG
Descriptor: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2023-05-10
Release date:2024-05-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
5WVM
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Crystal structure of baeS cocrystallized with 2 mM indole
Descriptor: Maltose-binding periplasmic protein,Two-component system sensor kinase, SULFATE ION
Authors:Wang, W, Zhang, Y, Rang, T, Xu, D.
Deposit date:2016-12-26
Release date:2018-01-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the sensor domain of BaeS from Serratia marcescens FS14
Proteins, 85, 2017
5WVN
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Crystal structure of MBS-BaeS fusion protein
Descriptor: Maltose-binding periplasmic protein,Two-component system sensor kinase, SULFATE ION
Authors:Wang, W, Zhang, Y, Ran, T, Xu, D.
Deposit date:2016-12-26
Release date:2018-01-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the sensor domain of BaeS from Serratia marcescens FS14
Proteins, 85, 2017
8JT3
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Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Arg
Descriptor: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, ACETATE ION, CrmG, ...
Authors:Su, K, Zhang, Y, Xu, J, Liu, J.
Deposit date:2023-06-21
Release date:2023-08-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Co-crystal structure provides insights on transaminase CrmG recognition amino donor L-Arg.
Biochem.Biophys.Res.Commun., 675, 2023
7XTQ
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BU of 7xtq by Molmil
Cryo-EM structure of the R399-bound GPBAR-Gs complex
Descriptor: G-protein coupled bile acid receptor 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Ma, L, Yang, F, Wu, X, Mao, C, Sun, J, Yu, X, Zhang, Y, Zhang, P.
Deposit date:2022-05-17
Release date:2022-07-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis and molecular mechanism of biased GPBAR signaling in regulating NSCLC cell growth via YAP activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
3U1R
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BU of 3u1r by Molmil
Structure Analysis of A New Psychrophilic Marine Protease
Descriptor: Alkaline metalloprotease, CALCIUM ION, ZINC ION
Authors:Zhang, S.-C, Sun, M, Tang, L, Wang, Q.-H, Hao, J.-H, Han, Y, Hu, X.-J, Zhou, M, Lin, S.-X.
Deposit date:2011-09-30
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure analysis of a new psychrophilic marine protease.
Plos One, 6, 2011
6LON
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BU of 6lon by Molmil
Crystal structure of HPSG
Descriptor: (2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid, GLYCEROL, PFL2/glycerol dehydratase family glycyl radical enzyme, ...
Authors:Liu, J, Zhang, Y, Yuchi, Z.
Deposit date:2020-01-06
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L4R
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BU of 6l4r by Molmil
Crystal structure of Enterovirus D68 RdRp
Descriptor: RdRp
Authors:Wang, M.L, Li, L, Zhang, Y, Chen, Y.P, Su, D.
Deposit date:2019-10-21
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structure of the enterovirus D68 RNA-dependent RNA polymerase in complex with NADPH implicates an inhibitor binding site in the RNA template tunnel.
J.Struct.Biol., 211, 2020
8QJH
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BU of 8qjh by Molmil
Connexin-32 gap junction channel in complex with mefloquine
Descriptor: Gap junction beta-1 protein
Authors:Lavriha, P, Korkhov, V.M, Han, Y.
Deposit date:2023-09-13
Release date:2024-09-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Two distinct mechanisms of connexin channel inhibition by mefloquine and 2-aminoethoxydiphenyl borate
To Be Published
8QKI
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BU of 8qki by Molmil
Connexin-32 hemichannel upon addition of mefloquine
Descriptor: CHOLESTEROL, Gap junction beta-1 protein
Authors:Lavriha, P, Korkhov, V.M, Han, Y.
Deposit date:2023-09-15
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Two distinct mechanisms of connexin channel inhibition by mefloquine and 2-aminoethoxydiphenyl borate
To Be Published
8QK6
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BU of 8qk6 by Molmil
Connexin-32 hemichannel upon addition of 2-aminoetoxydiphenyl borate
Descriptor: CHOLESTEROL, Gap junction beta-1 protein
Authors:Lavriha, P, Korkhov, V.M, Han, Y.
Deposit date:2023-09-14
Release date:2024-09-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Two distinct mechanisms of connexin channel inhibition by mefloquine and 2-aminoethoxydiphenyl borate
To Be Published
8QKO
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BU of 8qko by Molmil
Connexin-43 gap junction channel in complex with mefloquine
Descriptor: Gap junction alpha-1 protein
Authors:Lavriha, P, Korkhov, V.M, Han, Y.
Deposit date:2023-09-16
Release date:2024-09-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Two distinct mechanisms of connexin channel inhibition by mefloquine and 2-aminoethoxydiphenyl borate
To Be Published
8QJF
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BU of 8qjf by Molmil
Connexin-32 gap junction channel in complex with 2-aminoethoxydiphenyl borate
Descriptor: CHOLESTEROL, Gap junction beta-1 protein
Authors:Lavriha, P, Korkhov, V.M, Han, Y.
Deposit date:2023-09-13
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Two distinct mechanisms of connexin channel inhibition by mefloquine and 2-aminoethoxydiphenyl borate
To Be Published
8KIH
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PhmA, a type I diterpene synthase without NST/DTE motif
Descriptor: (2Z,6E,10E)-2-fluoro-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl trihydrogen diphosphate, MAGNESIUM ION, diterpene synthase, ...
Authors:Zhang, B, Ge, H.M, Zhu, A, Zhang, Y.
Deposit date:2023-08-23
Release date:2023-10-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biosynthesis of Phomactin Platelet Activating Factor Antagonist Requires a Two-Enzyme Cascade.
Angew.Chem.Int.Ed.Engl., 62, 2023
8KI5
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PhmA, a type I diterpene synthase without NST/DTE motif
Descriptor: (2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, PhmA
Authors:Zhang, B, Ge, H.M, Zhu, A, Zhang, Y.
Deposit date:2023-08-22
Release date:2023-10-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Biosynthesis of Phomactin Platelet Activating Factor Antagonist Requires a Two-Enzyme Cascade.
Angew.Chem.Int.Ed.Engl., 62, 2023
1B8U
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BU of 1b8u by Molmil
MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXALOACETATE ION, PROTEIN (MALATE DEHYDROGENASE)
Authors:Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
Deposit date:1999-02-02
Release date:1999-07-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
1B8P
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BU of 1b8p by Molmil
MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
Descriptor: PROTEIN (MALATE DEHYDROGENASE)
Authors:Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
Deposit date:1999-02-02
Release date:1999-07-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999

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