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PDB: 249 results

7VIB
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BU of 7vib by Molmil
Crystal structure of human ACE2 and GX/P2V RBD
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein, ZINC ION
Authors:Guo, Y, Cao, W, Jia, N, Wang, W, Yuan, S, Wang, Y.
Deposit date:2021-09-26
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of human ACE2 and GX/P2V RBD
To Be Published
6B3R
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BU of 6b3r by Molmil
Structure of the mechanosensitive channel Piezo1
Descriptor: Piezo-type mechanosensitive ion channel component 1, unknown fragment
Authors:Guo, Y.R, MacKinnon, R.
Deposit date:2017-09-22
Release date:2017-12-20
Last modified:2018-05-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure-based membrane dome mechanism for Piezo mechanosensitivity.
Elife, 6, 2017
7XGQ
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BU of 7xgq by Molmil
Crystal structure of chitosanase crystallized by ammonium sulfate with glycan
Descriptor: chitosanase
Authors:Guo, Y, Hoshino, T.
Deposit date:2022-04-05
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Influence of Glycan Agents on Protein Crystallization with Ammonium Sulfate
Cryst.Growth Des., 2022
7XGC
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BU of 7xgc by Molmil
Crystal structure of influenza polymerase acidic subunit N-terminal domain crystallized by ammonium sulfate with glycan
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION
Authors:Guo, Y, Hoshino, T.
Deposit date:2022-04-04
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Influence of Glycan Agents on Protein Crystallization with Ammonium Sulfate
Cryst.Growth Des., 2022
8WNT
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BU of 8wnt by Molmil
Cryo EM map of SLC7A10 with L-Alanine substrate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALANINE, ...
Authors:Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
Deposit date:2023-10-06
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8Z5L
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BU of 8z5l by Molmil
Crystal structure of metallo-beta-lactamse, IMP-1, complexed with a quinolinone-based inhibitor
Descriptor: 3-[2-azanyl-5-[2-cyclohexylethyl-[3-(4-methylphenoxy)propyl]amino]phenyl]propanoic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Kamo, T, Kuroda, K, Nimura, S, Guo, Y, Kondo, S, Nukaga, M, Hoshino, T.
Deposit date:2024-04-18
Release date:2024-05-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Development of Inhibitory Compounds for Metallo-beta-lactamase through Computational Design and Crystallographic Analysis.
Biochemistry, 2024
5VKQ
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BU of 5vkq by Molmil
Structure of a mechanotransduction ion channel Drosophila NOMPC in nanodisc
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, No mechanoreceptor potential C isoform L
Authors:Jin, P, Bulkley, D, Guo, Y, Zhang, W, Guo, Z, Huynh, W, Wu, S, Meltzer, S, Chen, T, Jan, L.Y, Jan, Y.-N, Cheng, Y.
Deposit date:2017-04-22
Release date:2017-06-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Electron cryo-microscopy structure of the mechanotransduction channel NOMPC.
Nature, 547, 2017
8WNS
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BU of 8wns by Molmil
Cryo EM map of SLC7A10 in the apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1
Authors:Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
Deposit date:2023-10-06
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8WNY
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BU of 8wny by Molmil
Cryo EM map of SLC7A10-SLC3A2 complex in the D-serine bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1, ...
Authors:Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
Deposit date:2023-10-06
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
5JIE
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BU of 5jie by Molmil
Crystal structure of the Orsay virus delta protein N-terminal fragment (aa 1~66)
Descriptor: Protein delta
Authors:Fan, Y, Guo, Y, Zhong, W, Tao, Y.J.
Deposit date:2016-04-22
Release date:2017-02-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1374 Å)
Cite:Structure of a pentameric virion-associated fiber with a potential role in Orsay virus entry to host cells.
PLoS Pathog., 13, 2017
6VSC
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BU of 6vsc by Molmil
Single particle reconstruction of HemQ from Geobacillus based on data acquired in the presence of substantial aberrations
Descriptor: HemQ
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-11
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
6VSA
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BU of 6vsa by Molmil
Single particle reconstruction of HemQ from Geobacillus based on data acquired in the presence of substantial aberrations
Descriptor: HemQ
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-10
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
7C2L
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BU of 7c2l by Molmil
S protein of SARS-CoV-2 in complex bound with 4A8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Zhang, Y.Y, Guo, Y.Y, Li, Y.N, Xia, L, Zhou, Q.
Deposit date:2020-05-08
Release date:2020-07-01
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A neutralizing human antibody binds to the N-terminal domain of the Spike protein of SARS-CoV-2.
Science, 369, 2020
6VRS
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BU of 6vrs by Molmil
Single particle reconstruction of glucose isomerase from Streptomyces rubiginosus based on data acquired in the presence of substantial aberrations
Descriptor: MANGANESE (II) ION, xylose isomerase
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-09
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
5VBT
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BU of 5vbt by Molmil
Crystal structure of a highly specific and potent USP7 ubiquitin variant inhibitor
Descriptor: UBH04
Authors:DONG, A, DONG, X, LIU, L, GUO, Y, LI, Y, ZHANG, W, WALKER, J.R, SIDHU, S, Bountra, C, Arrowsmith, C.H, Edwards, A.M, TONG, Y, Structural Genomics Consortium (SGC)
Deposit date:2017-03-30
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of a highly specific and potent USP7 ubiquitin variant inhibitor
to be published
4G3Y
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BU of 4g3y by Molmil
Crystal structure of TNF-alpha in complex with Infliximab Fab fragment
Descriptor: Tumor necrosis factor, infliximab Fab H, infliximab Fab L
Authors:Liang, S.Y, Dai, J.X, Guo, Y.J, Lou, Z.Y.
Deposit date:2012-07-15
Release date:2013-03-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for treating tumor necrosis factor alpha (TNFalpha)-associated diseases with the therapeutic antibody infliximab
J.Biol.Chem., 288, 2013
6CSX
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BU of 6csx by Molmil
Single particles Cryo-EM structure of AcrB D407A associated with lipid bilayer at 3.0 Angstrom
Descriptor: DODECANE, Multidrug efflux pump subunit AcrB, PHOSPHATIDYLETHANOLAMINE
Authors:Qiu, W, Fu, Z, Guo, Y.
Deposit date:2018-03-21
Release date:2018-12-05
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and activity of lipid bilayer within a membrane-protein transporter.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1R5I
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BU of 1r5i by Molmil
Crystal structure of the MAM-MHC complex
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
Authors:Zhao, Y, Li, Z, Drozd, S.J, Guo, Y, Mourad, W, Li, H.
Deposit date:2003-10-10
Release date:2004-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Mycoplasma arthritidis mitogen complexed with HLA-DR1 reveals a novel superantigen fold and a dimerized superantigen-MHC complex.
Structure, 12, 2004
2OY0
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BU of 2oy0 by Molmil
Crystal structure of the West Nile virus methyltransferase
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Li, H.M, Zhao, Y.W, Guo, Y, Shi, P.Y.
Deposit date:2007-02-21
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and Function of Flavivirus NS5 Methyltransferase.
J.Virol., 81, 2007
5M11
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BU of 5m11 by Molmil
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Descriptor: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Lasica, A.M, Goulas, T, Mizgalska, D, Zhou, X, Ksiazek, M, Madej, M, Guo, Y, Guevara, T, Nowak, M, Potempa, B, Goel, A, Sztukowska, M, Prabhakar, A.T, Bzowska, M, Widziolek, M, Thogersen, I.B, Enghild, J.J, Simonian, M, Kulczyk, A.W, Nguyen, K.-A, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2016-10-07
Release date:2016-11-09
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Sci Rep, 6, 2016
7N4T
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BU of 7n4t by Molmil
Low conductance mechanosensitive channel YnaI
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Low conductance mechanosensitive channel YnaI
Authors:Catalano, C, Ben-Hail, D, Qiu, W, des Georges, A, Guo, Y.
Deposit date:2021-06-04
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cryo-EM Structure of Mechanosensitive Channel YnaI Using SMA2000: Challenges and Opportunities.
Membranes (Basel), 11, 2021
7BTK
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BU of 7btk by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSA01
Descriptor: 4-[[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-2H-indol-1-yl]methyl]benzoic acid, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Chen, X, Hu, Y.L, Liu, Q.M, Gao, Y, Yuan, R, Guo, Y.
Deposit date:2020-04-01
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Two-Dimensional Design Strategy to Construct Smart Fluorescent Probes for the Precise Tracking of Senescence.
Angew.Chem.Int.Ed.Engl., 60, 2021
7BRS
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BU of 7brs by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSA02
Descriptor: 8-[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]octanoic acid, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Chen, X, Hu, Y.L, Gao, Y, Yuan, R, Guo, Y.
Deposit date:2020-03-30
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Two-Dimensional Design Strategy to Construct Smart Fluorescent Probes for the Precise Tracking of Senescence.
Angew.Chem.Int.Ed.Engl., 60, 2021
7C81
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BU of 7c81 by Molmil
E30 F-particle in complex with 6C5
Descriptor: Heavy chain, Light chain, SPHINGOSINE, ...
Authors:Wang, K, Zheng, B, Zhang, L, Cui, L, Su, X, Zhang, Q, Guo, Y, Zhu, L, Zhu, F, Rao, Z, Wang, X.
Deposit date:2020-05-28
Release date:2020-07-29
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Serotype specific epitopes identified by neutralizing antibodies underpin immunogenic differences in Enterovirus B.
Nat Commun, 11, 2020
7C80
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BU of 7c80 by Molmil
E30 F-particle in complex with 4B10
Descriptor: Heavy chain, Light chain, SPHINGOSINE, ...
Authors:Wang, K, Zheng, B, Zhang, L, Cui, L, Su, X, Zhang, Q, Guo, Y, Zhu, L, Zhu, F, Rao, Z, Wang, X.
Deposit date:2020-05-28
Release date:2020-07-29
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Serotype specific epitopes identified by neutralizing antibodies underpin immunogenic differences in Enterovirus B.
Nat Commun, 11, 2020

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