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PDB: 40736 件

4UXJ
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Leishmania major Thymidine Kinase in complex with dTTP
分子名称: MAGNESIUM ION, THYMIDINE KINASE, THYMIDINE-5'-TRIPHOSPHATE, ...
著者Timm, J, Bosch-Navarrete, C, Recio, E, Nettleship, J.E, Rada, H, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2014-08-22
公開日2015-05-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and Kinetic Characterization of Thymidine Kinase from Leishmania Major.
Plos Negl Trop Dis, 9, 2015
4USF
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Human SLK with SB-440719
分子名称: 4-[4-(6-methoxynaphthalen-2-yl)-1H-imidazol-5-yl]pyridine, STE20-LIKE SERINE/THREONINE-PROTEIN KINASE
著者Elkins, J.M, Salah, E, Szklarz, M, von Delft, F, Bountra, C, Edwards, A.M, Knapp, S.
登録日2014-07-07
公開日2015-07-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Comprehensive Characterization of the Published Kinase Inhibitor Set.
Nat.Biotechnol., 34, 2016
6QZ2
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Structure of MHETase from Ideonella sakaiensis
分子名称: CALCIUM ION, Mono(2-hydroxyethyl) terephthalate hydrolase
著者Allen, M.D, Johnson, C.W, Knott, B.C, Beckham, G.T, McGeehan, J.E.
登録日2019-03-10
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization and engineering of a two-enzyme system for plastics depolymerization.
Proc.Natl.Acad.Sci.USA, 117, 2020
8ITN
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Crystal structure of USP47apo catalytic domain
分子名称: Ubiquitin carboxyl-terminal hydrolase 47, ZINC ION
著者Kim, E.E, Shin, S.C.
登録日2023-03-22
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional characterization of USP47 reveals a hot spot for inhibitor design.
Commun Biol, 6, 2023
6E58
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Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2)
分子名称: CALCIUM ION, Secreted Endo-beta-N-acetylglucosaminidase (EndoS)
著者Klontz, E.H, Trastoy, B, Gunther, S, Guerin, M.E, Sundberg, E.J.
登録日2018-07-19
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
6ZO8
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Minocycline binding to the deep binding pocket of AcrB-G621P
分子名称: (2S)-3-hydroxypropane-1,2-diyl didecanoate, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, ...
著者Tam, H.K, Foong, W.E, Pos, K.M.
登録日2020-07-07
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allosteric drug transport mechanism of multidrug transporter AcrB.
Nat Commun, 12, 2021
8ITP
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Crystal structure of USP47 catalytic domain complex with ubiquitin
分子名称: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 47, ZINC ION
著者Kim, E.E, Shin, S.C.
登録日2023-03-22
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional characterization of USP47 reveals a hot spot for inhibitor design.
Commun Biol, 6, 2023
5KWQ
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Two Tandem RRM Domains of FBP-Interacting Repressor (FIR), also Known as PUF60
分子名称: Poly(U)-binding-splicing factor PUF60
著者Crichlow, G.V, Yang, Y, Zhou, H, Lolis, E.J, Braddock, D.T.
登録日2016-07-18
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
6ODB
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Crystal structure of HDAC8 in complex with compound 3
分子名称: GLYCEROL, Histone deacetylase 8, N-{2-[(1E)-3-(hydroxyamino)-3-oxoprop-1-en-1-yl]phenyl}-2-phenoxybenzamide, ...
著者Zheng, X, Conti, C, Caravella, J, Zablocki, M.-M, Bair, K, Barczak, N, Han, B, Lancia Jr, D, Liu, C, Martin, M, Ng, P.Y, Rudnitskaya, A, Thomason, J.J, Garcia-Dancey, R, Hardy, C, Lahdenranta, J, Leng, C, Li, P, Pardo, E, Saldahna, A, Tan, T, Toms, A.V, Yao, L, Zhang, C.
登録日2019-03-26
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based Discovery of Novel N-(E)-N-Hydroxy-3-(2-(2-oxoimidazolidin-1-yl)phenyl)acrylamides as Potent and Selective HDAC8 inhibitors
To Be Published
6ZO6
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Minocycline binding to the deep binding pocket of AcrB-G619P
分子名称: (2S)-3-hydroxypropane-1,2-diyl didecanoate, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, ...
著者Tam, H.K, Foong, W.E, Pos, K.M.
登録日2020-07-07
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Allosteric drug transport mechanism of multidrug transporter AcrB.
Nat Commun, 12, 2021
6M36
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The crystal structure of B. subtilis RsbV/RsbW complex in the monoclinic crystal form
分子名称: Anti-sigma-B factor antagonist, Serine-protein kinase RsbW
著者Pathak, D, Kwon, E, Kim, D.Y.
登録日2020-03-02
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural insights into the regulation of SigB activity by RsbV and RsbW.
Iucrj, 7, 2020
8SVZ
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Structure of the Francisella response regulator KdpE receiver domain
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Two-component response regulator
著者Milton, M.E, Cavanagh, J.
登録日2023-05-17
公開日2024-06-12
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Insights into DNA-binding motifs and mechanisms of Francisella tularensis novicida two-component system response regulator proteins QseB, KdpE, and BfpR.
Biochem.Biophys.Res.Commun., 722, 2024
6O5G
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Calmodulin in complex with isomalbrancheamide D
分子名称: (5aS,12aS,13aS)-9-bromo-8-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7 ,6-b]carbazol-14-one, CALCIUM ION, Calmodulin-1, ...
著者Beyett, T.S, Fraley, A.E, Tesmer, J.J.G.
登録日2019-03-02
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Perturbation of the interactions of calmodulin with GRK5 using a natural product chemical probe.
Proc.Natl.Acad.Sci.USA, 116, 2019
8G8W
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BU of 8g8w by Molmil
Molecular mechanism of nucleotide inhibition of human uncoupling protein 1
分子名称: CARDIOLIPIN, GUANOSINE-5'-TRIPHOSPHATE, Mitochondrial brown fat uncoupling protein 1, ...
著者Gogoi, P, Jones, S.A, Ruprecht, J.J, King, M.S, Lee, Y, Zogg, T, Pardon, E, Chand, D, Steimle, S, Copeman, D, Cotrim, C.A, Steyaert, J, Crichton, P.G, Moiseenkova-Bell, V, Kunji, E.R.S.
登録日2023-02-20
公開日2023-06-07
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of purine nucleotide inhibition of human uncoupling protein 1.
Sci Adv, 9, 2023
7MRI
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BU of 7mri by Molmil
Crystal structure of N63T yeast iso-1-cytochrome c
分子名称: Cytochrome c isoform 1, HEME C
著者Lei, H, Bowler, B.E, Evenson, G.E.
登録日2021-05-07
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Effect on intrinsic peroxidase activity of substituting coevolved residues from Omega-loop C of human cytochrome c into yeast iso-1-cytochrome c.
J.Inorg.Biochem., 232, 2022
6EN3
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Crystal structure of full length EndoS from Streptococcus pyogenes in complex with G2 oligosaccharide.
分子名称: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2,Multifunctional-autoprocessing repeats-in-toxin, NICKEL (II) ION, ...
著者Trastoy, B, Klontz, E.H, Orwenyo, J, Marina, A, Wang, L.X, Sundberg, E.J, Guerin, M.E.
登録日2017-10-04
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structural basis for the recognition of complex-type N-glycans by Endoglycosidase S.
Nat Commun, 9, 2018
5IK2
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Caldalaklibacillus thermarum F1-ATPase (epsilon mutant)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase epsilon chain, ATP synthase gamma chain, ...
著者Ferguson, S.A, Cook, G.M, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
登録日2016-03-03
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Regulation of the thermoalkaliphilic F1-ATPase from Caldalkalibacillus thermarum.
Proc.Natl.Acad.Sci.USA, 113, 2016
7A8U
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Crystal structure of sarcomeric protein FATZ-1 (d91-FATZ-1 construct) in complex with rod domain of alpha-actinin-2
分子名称: Alpha-actinin-2, Myozenin-1
著者Sponga, A, Arolas, J.L, Rodriguez Chamorro, A, Mlynek, G, Hollerl, E, Schreiner, C, Pedron, M, Kostan, J, Ribeiro, E.A, Djinovic-Carugo, K.
登録日2020-08-31
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.802 Å)
主引用文献Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with alpha-actinin.
Sci Adv, 7, 2021
7A8T
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Crystal structure of sarcomeric protein FATZ-1 (mini-FATZ-1 construct) in complex with rod domain of alpha-actinin-2
分子名称: Alpha-actinin-2, Myozenin-1
著者Sponga, A, Arolas, J.L, Rodriguez Chamorro, A, Mlynek, G, Hollerl, E, Schreiner, C, Pedron, M, Kostan, J, Ribeiro, E.A, Djinovic-Carugo, K.
登録日2020-08-31
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with alpha-actinin.
Sci Adv, 7, 2021
4X89
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NavMs voltage-gated sodium channal pore and C-terminal domain soaked with Silver nitrate
分子名称: HEGA-10, Ion transport protein, PENTAETHYLENE GLYCOL, ...
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-12-10
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Molecular basis of ion permeability in a voltage-gated sodium channel.
Embo J., 35, 2016
6OTR
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Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Pavelich, I.P, Hoffer, E.D, Maehigashi, T, Dunham, C.M.
登録日2019-05-03
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
Nucleic Acids Res., 47, 2019
6OK1
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Ltp2-ChsH2(DUF35) aldolase
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ChsH2(DUF35), ...
著者Kimber, M.S, Mallette, E, Aggett, R, Seah, S.Y.K.
登録日2019-04-12
公開日2019-06-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The steroid side-chain-cleaving aldolase Ltp2-ChsH2DUF35is a thiolase superfamily member with a radically repurposed active site.
J.Biol.Chem., 294, 2019
6O5Z
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Crystal Structure of the human MLKL pseudokinase domain bound to compound 2
分子名称: 1,2-ETHANEDIOL, 1-[2-fluoranyl-5-(trifluoromethyl)phenyl]-3-[4-[methyl-[2-[(3-sulfamoylphenyl)amino]pyrimidin-4-yl]amino]phenyl]urea, Mixed lineage kinase domain-like protein
著者Cowan, A.D, Murphy, J.M, Pierotti, C.L, Lessene, G.L, Czabotar, P.E.
登録日2019-03-04
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献Potent Inhibition of Necroptosis by Simultaneously Targeting Multiple Effectors of the Pathway.
Acs Chem.Biol., 15, 2020
8GUV
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LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
分子名称: CALCIUM ION, PA-I galactophilic lectin, Tolcapone
著者Kuhaudomlarp, S, Siebs, E, Varrot, A, Imberty, A, Titz, A.
登録日2022-09-13
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)
To Be Published
8G7J
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mtHsp60 V72I apo
分子名称: 60 kDa heat shock protein, mitochondrial
著者Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
登録日2023-02-16
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023

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