6OTR

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)

This is a large structure.

Summary for 6OTR

Descriptor16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ... (60 entities in total)
Functional Keywordsprotein biosynthesis, ribosomes, rna, mrna, trna, transfer rna, 30s, 50s, 70s, 16s, 23s, ribosomal subunit, bacterial proteins, translation, bacterial translation, codon, decoding, frameshift, frameshift suppressor, ribosome
Biological sourceThermus thermophilus HB8
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Total number of polymer chains116
Total molecular weight4516833.26
Authors
Pavelich, I.P.,Hoffer, E.D.,Maehigashi, T.,Dunham, C.M. (deposition date: 2019-05-03, release date: 2019-08-21, Last modification date: 2019-11-27)
Primary citation
Pavelich, I.J.,Maehigashi, T.,Hoffer, E.D.,Ruangprasert, A.,Miles, S.J.,Dunham, C.M.
Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
Nucleic Acids Res., 47:10400-10413, 2019
PubMed: 31501867 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gkz760
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.12 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone7 0.6% 1.7% 0.53MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report