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PDB: 193 results

1KFI
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Crystal Structure of the Exocytosis-Sensitive Phosphoprotein, pp63/Parafusin (phosphoglucomutase) from Paramecium
Descriptor: SULFATE ION, ZINC ION, phosphoglucomutase 1
Authors:Mueller, S, Diederichs, K, Breed, J, Kissmehl, R, Hauser, K, Plattner, H, Welte, W.
Deposit date:2001-11-21
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure analysis of the exocytosis-sensitive phosphoprotein, pp63/parafusin (phosphoglucomutase), from Paramecium reveals significant conformational variability.
J.Mol.Biol., 315, 2002
5NKL
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Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with the artificial base pair dDs-dPxTP
Descriptor: ACETATE ION, DNA (5'-D(*AP*AP*AP*(DNU)P*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ...
Authors:Betz, K, Marx, A, Diederichs, K, Hirao, I, Kimoto, M.
Deposit date:2017-03-31
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Expansion of the Genetic Alphabet with an Artificial Nucleobase Pair.
Angew. Chem. Int. Ed. Engl., 56, 2017
1KFQ
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Crystal Structure of Exocytosis-Sensitive Phosphoprotein, pp63/parafusin (Phosphoglucomutse) from Paramecium. OPEN FORM
Descriptor: CALCIUM ION, phosphoglucomutase 1
Authors:Mueller, S, Diederichs, K, Breed, J, Kissmehl, R, Hauser, K, Plattner, H, Welte, W.
Deposit date:2001-11-22
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure analysis of the exocytosis-sensitive phosphoprotein, pp63/parafusin (phosphoglucomutase), from Paramecium reveals significant conformational variability.
J.Mol.Biol., 315, 2002
5MKK
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Crystal structure of the heterodimeric ABC transporter TmrAB, a homolog of the antigen translocation complex TAP
Descriptor: Multidrug resistance ABC transporter ATP-binding and permease protein, SULFATE ION
Authors:Noell, A, Thomas, C, Tomasiak, T.M, Olieric, V, Wang, M, Diederichs, K, Stroud, R.M, Pos, K.M, Tampe, R.
Deposit date:2016-12-05
Release date:2017-01-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and mechanistic basis of a functional homolog of the antigen transporter TAP.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3LWM
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Structure of the large fragment of thermus aquaticus DNA polymerase I in complex with a blunt-ended DNA and ddATP
Descriptor: 2',3'-dideoxyadenosine triphosphate, ACETATE ION, DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(2DA))-3'), ...
Authors:Marx, A, Diederichs, K, Obeid, S.
Deposit date:2010-02-24
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.186 Å)
Cite:Replication through an abasic DNA lesion: structural basis for adenine selectivity
Embo J., 29, 2010
6Q4V
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BU of 6q4v by Molmil
KlenTaq DNA polymerase in complex with dATP
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ...
Authors:Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2018-12-06
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:The Structure of an Archaeal B-Family DNA Polymerase in Complex with a Chemically Modified Nucleotide.
Angew.Chem.Int.Ed.Engl., 58, 2019
6Q4T
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KOD DNA pol in a closed ternary complex with 7-deaza-7-(2-(2-hydroxyethoxy)-N-(prop-2-yn-1-yl)acetamide)-2-dATP
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*C)-3'), DNA (5'-D(P*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ...
Authors:Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2018-12-06
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:The Structure of an Archaeal B-Family DNA Polymerase in Complex with a Chemically Modified Nucleotide.
Angew.Chem.Int.Ed.Engl., 58, 2019
6Q4U
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KlenTaq DNA pol in a closed ternary complex with 7-deaza-7-(2-(2-hydroxyethoxy)-N-(prop-2-yn-1-yl)acetamide)-2-dATP
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*(DOC))-3'), ...
Authors:Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2018-12-06
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:The Structure of an Archaeal B-Family DNA Polymerase in Complex with a Chemically Modified Nucleotide.
Angew.Chem.Int.Ed.Engl., 58, 2019
5FHY
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Crystal structure of FliD (HAP2) from Pseudomonas aeruginosa PAO1
Descriptor: B-type flagellar hook-associated protein 2, SODIUM ION
Authors:Postel, S, Bonsor, D, Diederichs, K, Sundberg, E.J.
Deposit date:2015-12-22
Release date:2016-10-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Bacterial flagellar capping proteins adopt diverse oligomeric states.
Elife, 5, 2016
7AZW
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Crystal structure of the MIZ1-BTB-domain
Descriptor: GLYCEROL, Zinc finger and BTB domain-containing protein 17 isoform X1
Authors:Orth, B, Sander, B, Diederichs, K, Lorenz, S.
Deposit date:2020-11-17
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1.
Structure, 29, 2021
7AZX
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Crystal structure of the MIZ1-BTB-domain in complex with a HUWE1-derived peptide
Descriptor: E3 ubiquitin-protein ligase HUWE1, Zinc finger and BTB domain-containing protein 17 isoform X1
Authors:Orth, B, Sander, B, Diederichs, K, Lorenz, S.
Deposit date:2020-11-17
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1.
Structure, 29, 2021
1QFG
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E. COLI FERRIC HYDROXAMATE RECEPTOR (FHUA)
Descriptor: 3-HYDROXY-TETRADECANOIC ACID, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, DIPHOSPHATE, ...
Authors:Ferguson, A.D, Welte, W, Hofmann, E, Lindner, B, Holst, O, Coulton, J.W, Diederichs, K.
Deposit date:1999-04-10
Release date:2000-07-26
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A conserved structural motif for lipopolysaccharide recognition by procaryotic and eucaryotic proteins.
Structure Fold.Des., 8, 2000
1QJQ
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FERRIC HYDROXAMATE RECEPTOR FROM ESCHERICHIA COLI (FHUA)
Descriptor: 3-HYDROXY-TETRADECANOIC ACID, DIPHOSPHATE, FERRIC HYDROXAMATE RECEPTOR, ...
Authors:Ferguson, A.D, Braun, V, Fiedler, H.-P, Coulton, J.W, Diederichs, K, Welte, W.
Deposit date:1999-06-29
Release date:2000-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of the antibiotic albomycin in complex with the outer membrane transporter FhuA.
Protein Sci., 9, 2000
1QFF
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E. COLI FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) IN COMPLEX WITH BOUND FERRICHROME-IRON
Descriptor: 2-AMINO-VINYL-PHOSPHATE, 3-HYDROXY-TETRADECANOIC ACID, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, ...
Authors:Ferguson, A.D, Hofmann, E, Coulton, J.W, Diederichs, K, Welte, W.
Deposit date:1999-04-10
Release date:2000-07-26
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A conserved structural motif for lipopolysaccharide recognition by procaryotic and eucaryotic proteins.
Structure Fold.Des., 8, 2000
1QKC
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ESCHERICHIA COLI FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) IN COMPLEX DELTA TWO-ALBOMYCIN
Descriptor: 3-HYDROXY-TETRADECANOIC ACID, DELTA-2-ALBOMYCIN A1, DIPHOSPHATE, ...
Authors:Ferguson, A.D, Braun, V, Fiedler, H.-P, Coulton, J.W, Diederichs, K, Welte, W.
Deposit date:1999-07-18
Release date:2000-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the antibiotic albomycin in complex with the outer membrane transporter FhuA.
Protein Sci., 9, 2000
2OM5
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BU of 2om5 by Molmil
N-Terminal Fragment of Human TAX1
Descriptor: Contactin 2
Authors:Moertl, M, Sonderegger, P, Diederichs, K, Welte, W.
Deposit date:2007-01-20
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:The crystal structure of the ligand-binding module of human TAG-1 suggests a new mode of homophilic interaction
Protein Sci., 16, 2007
7P8P
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BU of 7p8p by Molmil
Crystal structure of Fhit covalently bound to a nucleotide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bis(5'-adenosyl)-triphosphatase, SODIUM ION, ...
Authors:Herzog, D, Missun, M, Diederichs, K, Marx, A.
Deposit date:2021-07-23
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Chemical Proteomics of the Tumor Suppressor Fhit Covalently Bound to the Cofactor Ap 3 A Elucidates Its Inhibitory Action on Translation.
J.Am.Chem.Soc., 144, 2022
2HRT
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Asymmetric structure of trimeric AcrB from Escherichia coli
Descriptor: Acriflavine resistance protein B, CITRATE ANION
Authors:Seeger, M.A, Schiefner, A, Eicher, T, Verrey, F, Diederichs, K, Pos, K.M.
Deposit date:2006-07-20
Release date:2006-09-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Asymmetry of AcrB Trimer Suggests a Peristaltic Pump Mechanism.
Science, 313, 2006
1Z6R
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Crystal structure of Mlc from Escherichia coli
Descriptor: Mlc protein, ZINC ION
Authors:Schiefner, A, Gerber, K, Seitz, S, Welte, W, Diederichs, K, Boos, W.
Deposit date:2005-03-23
Release date:2005-06-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of Mlc, a global regulator of sugar metabolism in Escherichia coli
J.Biol.Chem., 280, 2005
1EU8
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STRUCTURE OF TREHALOSE MALTOSE BINDING PROTEIN FROM THERMOCOCCUS LITORALIS
Descriptor: CHLORIDE ION, PLATINUM (II) ION, TREHALOSE/MALTOSE BINDING PROTEIN, ...
Authors:Diez, J, Diederichs, K, Greller, G, Horlacher, R, Boos, W, Welte, W.
Deposit date:2000-04-14
Release date:2001-03-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of a liganded trehalose/maltose-binding protein from the hyperthermophilic Archaeon Thermococcus litoralis at 1.85 A.
J.Mol.Biol., 305, 2001
1FCP
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FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) FROM E.COLI IN COMPLEX WITH BOUND FERRICHROME-IRON
Descriptor: 2-TRIDECANOYLOXY-PENTADECANOIC ACID, 3-OXO-PENTADECANOIC ACID, ACETOACETIC ACID, ...
Authors:Hofmann, E, Ferguson, A.D, Diederichs, K, Welte, W.
Deposit date:1998-10-14
Release date:1999-01-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Siderophore-mediated iron transport: crystal structure of FhuA with bound lipopolysaccharide.
Science, 282, 1998
5O7T
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Crystal structure of KlenTaq mutant M747K in a closed ternary complex with a dG:dCTP base pair
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase I, thermostable, ...
Authors:Betz, K, Diederichs, K, Marx, A.
Deposit date:2017-06-09
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the selective incorporation of an artificial nucleotide opposite a DNA adduct by a DNA polymerase.
Chem. Commun. (Camb.), 53, 2017
1FUE
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FLAVODOXIN FROM HELICOBACTER PYLORI
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Freigang, J, Diederichs, K, Schaefer, K.P, Welte, W, Paul, R.
Deposit date:2000-09-15
Release date:2002-02-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of oxidized flavodoxin, an essential protein in Helicobacter pylori.
Protein Sci., 11, 2002
5OXJ
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Crystal structure of KlenTaq mutant M747K in a closed ternary complex with a O6-MeG:BenziTP base pair
Descriptor: ACETATE ION, DNA polymerase I, thermostable, ...
Authors:Betz, K, Diederichs, K, Marx, A.
Deposit date:2017-09-06
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the selective incorporation of an artificial nucleotide opposite a DNA adduct by a DNA polymerase.
Chem. Commun. (Camb.), 53, 2017
5OMF
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Closed, ternary structure of KOD DNA polymerase
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*C)-3'), ...
Authors:Kropp, H.M, Betz, K, Wirth, J, Diederichs, K, Marx, A.
Deposit date:2017-07-31
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Crystal structures of ternary complexes of archaeal B-family DNA polymerases.
PLoS ONE, 12, 2017

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