Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 3016 results

1LXC
DownloadVisualize
BU of 1lxc by Molmil
Crystal Structure of E. Coli Enoyl Reductase-NAD+ with a Bound Acrylamide Inhibitor
Descriptor: 3-(6-AMINOPYRIDIN-3-YL)-N-METHYL-N-[(1-METHYL-1H-INDOL-2-YL)METHYL]ACRYLAMIDE, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Miller, W.H, Seefeld, M.A, Newlander, K.A, Uzinskas, I.N, Burgess, W.J, Heerding, D.A, Yuan, C.C.K, Head, M.S, Payne, D.J, Rittenhouse, S.F, Moore, T.D, Pearson, S.C, Dewolf, V, Berry, W.E, Keller, P.M, Polizzi, B.J, Qiu, X, Janson, C.A, Huffman, W.F.
Deposit date:2002-06-05
Release date:2002-09-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of aminopyridine-based inhibitors of bacterial enoyl-ACP reductase (FabI).
J.Med.Chem., 45, 2002
3ZKL
DownloadVisualize
BU of 3zkl by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with xylotriose
Descriptor: PENTAETHYLENE GLYCOL, PUTATIVE SUGAR TRANSPORTER SOLUTE-BINDING PROTEIN, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Ejby, M, Vujicic-Zagar, A, Fredslund, F, Svensson, B, Slotboom, D.J, Abou Hachem, M.
Deposit date:2013-01-23
Release date:2013-10-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
3ZP0
DownloadVisualize
BU of 3zp0 by Molmil
INFLUENZA VIRUS (VN1194) H5 HA with LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose
Authors:Liu, J, Stevens, D.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2013-02-26
Release date:2013-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding.
Virology, 447, 2013
4V8W
DownloadVisualize
BU of 4v8w by Molmil
Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex
Descriptor: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE
Authors:Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M.
Deposit date:2013-04-18
Release date:2014-07-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (17.5 Å)
Cite:Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex.
Structure, 21, 2013
5U34
DownloadVisualize
BU of 5u34 by Molmil
Crystal structure of AacC2c1-sgRNA binary complex
Descriptor: CRISPR-associated endonuclease C2c1, sgRNA
Authors:Yang, H, Gao, P, Rajashankar, K.R, Patel, D.J.
Deposit date:2016-12-01
Release date:2017-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.255 Å)
Cite:PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease.
Cell, 167, 2016
3ZPA
DownloadVisualize
BU of 3zpa by Molmil
INFLUENZA VIRUS (VN1194) H5 I155F mutant HA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ
Authors:Liu, J, Chen, Z, Stevens, D.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2013-02-27
Release date:2013-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding.
Virology, 447, 2013
3ZPB
DownloadVisualize
BU of 3zpb by Molmil
INFLUENZA VIRUS (VN1194) H5 E190D mutant HA with LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HAEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Liu, J, Stevens, D.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2013-02-27
Release date:2013-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding.
Virology, 447, 2013
5TPX
DownloadVisualize
BU of 5tpx by Molmil
Bromodomain from Plasmodium Faciparum Gcn5, complexed with compound
Descriptor: (1S,2S)-N~1~,N~1~-dimethyl-N~2~-(3-methyl[1,2,4]triazolo[3,4-a]phthalazin-6-yl)-1-phenylpropane-1,2-diamine, CHLORIDE ION, Histone acetyltransferase GCN5, ...
Authors:Lin, Y.H, Hou, C.F.D, MOUSTAKIM, M, DIXON, D.J, Loppnau, P, Tempel, W, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, BRENNAN, P.E, Walker, J.R, Structural Genomics Consortium (SGC)
Deposit date:2016-10-21
Release date:2017-01-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a PCAF Bromodomain Chemical Probe.
Angew. Chem. Int. Ed. Engl., 56, 2017
1M03
DownloadVisualize
BU of 1m03 by Molmil
Mutant Streptomyces plicatus beta-hexosaminidase (D313A) in complex with product (GlcNAc)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, CHLORIDE ION, ...
Authors:Williams, S.J, Mark, B.L, Vocadlo, D.J, James, M.N.G, Withers, S.G.
Deposit date:2002-06-11
Release date:2002-12-11
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Aspartate 313 in the Streptomyces plicatus hexosaminidase plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state.
J.Biol.Chem., 277, 2002
1M7Z
DownloadVisualize
BU of 1m7z by Molmil
Structure of Nitric Oxide Synthase Heme Protein from Bacillus Subtilis with N-Hydroxy-Arginine and Tetrahydrofolate Bound
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, N-OMEGA-HYDROXY-L-ARGININE, Nitric oxide synthase, ...
Authors:Pant, K, Bilwes, A.M, Adak, S, Stuehr, D.J, Crane, B.R.
Deposit date:2002-07-23
Release date:2002-10-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure of a nitric oxide synthase heme protein from Bacillus subtilis.
Biochemistry, 41, 2002
2A64
DownloadVisualize
BU of 2a64 by Molmil
Crystal Structure of Bacterial Ribonuclease P RNA
Descriptor: ribonuclease P RNA
Authors:Kazantsev, A.V, Krivenko, A.A, Harrington, D.J, Holbrook, S.R, Adams, P.D, Pace, N.R.
Deposit date:2005-07-01
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of a bacterial ribonuclease P RNA.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5JSZ
DownloadVisualize
BU of 5jsz by Molmil
Folate ECF transporter: apo state
Descriptor: Conserved hypothetical membrane protein, Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, ...
Authors:Swier, L.J.Y.M, Guskov, A, Slotboom, D.J.
Deposit date:2016-05-09
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Structural insight in the toppling mechanism of an energy-coupling factor transporter.
Nat Commun, 7, 2016
3ZYL
DownloadVisualize
BU of 3zyl by Molmil
Structure of a truncated CALM (PICALM) ANTH domain
Descriptor: PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBLY PROTEIN
Authors:Miller, S.E, Sahlender, D.A, Graham, S.C, Honing, S, Robinson, M.S, Peden, A.A, Owen, D.J.
Deposit date:2011-08-23
Release date:2011-12-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The molecular basis for the endocytosis of small R-SNAREs by the clathrin adaptor CALM.
Cell, 147, 2011
5JP2
DownloadVisualize
BU of 5jp2 by Molmil
Fcho1 Mu homology domain (Danio Rerio) with bound Eps15 peptide
Descriptor: Epidermal growth factor receptor substrate 15, F-BAR domain only protein 1, ZINC ION
Authors:McCoy, A.J, Wrobel, A, Owen, D.J.
Deposit date:2016-05-03
Release date:2016-06-08
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Transient Fcho1/2Eps15/RAP-2 Nanoclusters Prime the AP-2 Clathrin Adaptor for Cargo Binding.
Dev.Cell, 37, 2016
3ZD0
DownloadVisualize
BU of 3zd0 by Molmil
The Solution Structure of Monomeric Hepatitis C Virus p7 Yields Potent Inhibitors of Virion Release
Descriptor: P7 PROTEIN
Authors:Foster, T.L, Sthompson, G, Kalverda, A.P, Kankanala, J, Thompson, J, Barker, A.M, Clarke, D, Noerenberg, M, Pearson, A.R, Rowlands, D.J, Homans, S.W, Harris, M, Foster, R, Griffin, S.D.C.
Deposit date:2012-11-23
Release date:2013-09-04
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure-Guided Design Affirms Inhibitors of Hepatitis C Virus P7 as a Viable Class of Antivirals Targeting Virion Release
Hepatology, 59, 2014
3ZTG
DownloadVisualize
BU of 3ztg by Molmil
Solution structure of the RING finger-like domain of Retinoblastoma Binding Protein-6 (RBBP6)
Descriptor: E3 UBIQUITIN-PROTEIN LIGASE RBBP6, ZINC ION
Authors:Kappo, M.A, Ab, E, Atkinson, R.A, Faro, A, Muleya, V, Mulaudzi, T, Poole, J.O, McKenzie, J.M, Pugh, D.J.R.
Deposit date:2011-07-07
Release date:2011-12-07
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure of the Ring Finger-Like Domain of Retinoblastoma Binding Protein-6 (Rbbp6) Suggests It Functions as a U-Box
J.Biol.Chem., 287, 2012
1M01
DownloadVisualize
BU of 1m01 by Molmil
Wildtype Streptomyces plicatus beta-hexosaminidase in complex with product (GlcNAc)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, CHLORIDE ION, ...
Authors:J Williams, S, Mark, B.L, Vocadlo, D.J, James, M.N.G, Withers, S.G.
Deposit date:2002-06-11
Release date:2003-01-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Aspartate 313 in the Streptomyces plicatus hexosaminidase plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state.
J.Biol.Chem., 277, 2002
2A5P
DownloadVisualize
BU of 2a5p by Molmil
Monomeric parallel-stranded DNA tetraplex with snap-back 3+1 3' G-tetrad, single-residue chain reversal loops, GAG triad in the context of GAAG diagonal loop, NMR, 8 struct.
Descriptor: 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*IP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3'
Authors:Phan, A.T, Kuryavyi, V.V, Gaw, H.Y, Patel, D.J.
Deposit date:2005-06-30
Release date:2005-07-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Small-molecule interaction with a five-guanine-tract G-quadruplex structure from the human MYC promoter.
Nat.Chem.Biol., 1, 2005
1M6P
DownloadVisualize
BU of 1m6p by Molmil
EXTRACYTOPLASMIC DOMAIN OF BOVINE CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR, MANGANESE (II) ION
Authors:Roberts, D.L, Weix, D.J, Dahms, N.M, Kim, J.J.-P.
Deposit date:1998-04-19
Release date:1999-04-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of lysosomal enzyme recognition: three-dimensional structure of the cation-dependent mannose 6-phosphate receptor.
Cell(Cambridge,Mass.), 93, 1998
3ZLG
DownloadVisualize
BU of 3zlg by Molmil
Structure of group A Streptococcal enolase K362A mutant
Descriptor: ENOLASE, PHOSPHATE ION
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
5U33
DownloadVisualize
BU of 5u33 by Molmil
Crystal structure of AacC2c1-sgRNA-extended non-target DNA ternary complex
Descriptor: CRISPR-associated endonuclease C2c1, Non-target DNA strand, SULFATE ION, ...
Authors:Yang, H, Gao, P, Rajashankar, K.R, Patel, D.J.
Deposit date:2016-12-01
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease.
Cell, 167, 2016
5K8Q
DownloadVisualize
BU of 5k8q by Molmil
Crystal Structure of Calcium-loaded Calmodulin in complex with STRA6 CaMBP2-site peptide.
Descriptor: CALCIUM ION, Calmodulin, IMIDAZOLE, ...
Authors:Stowe, S.D, Clarke, O.B, Cavalier, M.C, Godoy-Ruiz, R, Mancia, F, Weber, D.J.
Deposit date:2016-05-30
Release date:2016-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.739 Å)
Cite:Structure of the STRA6 receptor for retinol uptake.
Science, 353, 2016
1MKO
DownloadVisualize
BU of 1mko by Molmil
A Fourth Quaternary Structure of Human Hemoglobin A at 2.18 A Resolution
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Safo, M.K, Abraham, D.J.
Deposit date:2002-08-29
Release date:2002-09-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:The enigma of the liganded hemoglobin end state: a novel quaternary structure of human carbonmonoxy hemoglobin.
Biochemistry, 44, 2005
3ZKW
DownloadVisualize
BU of 3zkw by Molmil
Periplasmic Binding Protein CeuE apo form
Descriptor: ENTEROCHELIN UPTAKE PERIPLASMIC BINDING PROTEIN
Authors:Raines, D.J, Moroz, O.V, Wilson, K.S, Duhme-Klair, A.K.
Deposit date:2013-01-25
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Interactions of a Periplasmic Binding Protein with a Tetradentate Siderophore Mimic.
Angew.Chem.Int.Ed.Engl., 52, 2013
1M31
DownloadVisualize
BU of 1m31 by Molmil
Three-Dimensional Solution Structure of Apo-Mts1
Descriptor: Placental calcium-binding protein
Authors:Vallely, K.M, Rustandi, R.R, Ellis, K.C, Varlamova, O, Bresnick, A.R, Weber, D.J.
Deposit date:2002-06-26
Release date:2002-10-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy.
Biochemistry, 41, 2002

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon