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PDB: 24269 件

1HSQ
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SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
分子名称: PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
著者Kohda, D, Hatanaka, H, Odaka, M, Inagaki, F.
登録日1994-06-13
公開日1994-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the SH3 domain of phospholipase C-gamma.
Cell(Cambridge,Mass.), 72, 1993
3JRE
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Crystal structure of Fis bound to 27 bp DNA F26 containing A-tract at center
分子名称: DNA (27-MER), DNA-binding protein fis
著者Stella, S, Cascio, D, Johnson, R.C.
登録日2009-09-08
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
9UGE
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Crystal structure of the complex of camel peptidoglycan recognition protein, PGRP-S with malic acid and oxalic acid at 2.3 A resolution
分子名称: D-MALATE, OXALIC ACID, Peptidoglycan recognition protein 1
著者Barik, D, Ahmad, N, Maurya, A, Yamini, S, Sharma, P, Yadav, S.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2025-04-11
公開日2025-05-14
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献Crystal structure of the complex of camel peptidoglycan recognition protein, PGRP-S with malic acid and oxalic acid at 2.3 A resolution
To Be Published
3J5R
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Reconstruction of TRPV1 ion channel in complex with capsaicin by single particle cryo-microscopy
分子名称: Transient receptor potential cation channel subfamily V member 1
著者Liao, M, Cao, E, Julius, D, Cheng, Y.
登録日2013-10-28
公開日2013-12-04
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献TRPV1 structures in distinct conformations reveal activation mechanisms.
Nature, 504, 2013
1HZ2
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SOLUTION NMR STRUCTURE OF SELF-COMPLEMENTARY DUPLEX 5'-D(AGGCG*CCT)2 CONTAINING A TRIMETHYLENE CROSSLINK AT THE N2 POSITION OF G*. MODEL OF A MALONDIALDEHYDE CROSSLINK
分子名称: DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3'), PROPANE
著者Dooley, P.A, Tsarouhtsis, D, Korbel, G.A, Nechev, L.V, Shearer, J, Zegar, I.S, Harris, C.M, Stone, M.P, Harris, T.M.
登録日2001-01-23
公開日2001-02-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural studies of an oligodeoxynucleotide containing a trimethylene interstrand cross-link in a 5'-(CpG) motif: model of a malondialdehyde cross-link.
J.Am.Chem.Soc., 123, 2001
3JV6
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Crystal structure of the dimerization domains p52 and RelB
分子名称: Nuclear factor NF-kappa-B p100 subunit, SULFATE ION, Transcription factor RelB
著者Vu, D, Huang, D.B, Ghosh, G.
登録日2009-09-15
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献A structural basis for selective dimerization by NF-kappa B RelB.
J.Mol.Biol., 425, 2013
3JXD
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BU of 3jxd by Molmil
Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+
分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', RUBIDIUM ION, Repressor protein C2
著者Watkins, D, Koudelka, G.B, Williams, L.D.
登録日2009-09-18
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sequence Recognition of DNA by Protein-Induced Conformational Transitions.
J.Mol.Biol., 396, 2010
3K2Y
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Crystal structure of protein lp_0118 from Lactobacillus plantarum,northeast structural genomics consortium target LpR91B
分子名称: uncharacterized protein lp_0118
著者Seetharaman, J, Lew, S, Vorobiev, S.M, Wang, D, Janjua, H, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2009-09-30
公開日2009-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of protein lp_0118 from Lactobacillus plantarum,northeast structural genomics consortium target LpR91B
To be Published
3K74
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Disruption of protein dynamics by an allosteric effector antibody
分子名称: Dihydrofolate reductase, Nanobody
著者Oyen, D, Srinivasan, V, Steyaert, J, Barlow, J.
登録日2009-10-12
公開日2010-10-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Constraining enzyme conformational change by an antibody leads to hyperbolic inhibition.
J.Mol.Biol., 407, 2011
3KA5
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Crystal structure of Ribosome-associated protein Y (PSrp-1) from Clostridium acetobutylicum. Northeast Structural Genomics Consortium target id CaR123A
分子名称: Ribosome-associated protein Y (PSrp-1)
著者Seetharaman, J, Neely, H, Wang, D, Janjua, H, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2009-10-18
公開日2009-11-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Ribosome-associated protein Y (PSrp-1) from Clostridium acetobutylicum
To be Published
3JVC
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Crystal Structure of the Lipoprotein_17 domain from Q9PRA0_UREPA protein of Ureaplasma parvum. Northeast Structural Genomics Consortium Target UuR17a.
分子名称: Conserved hypothetical membrane lipoprotein
著者Vorobiev, S, Neely, H, Lee, D, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-09-16
公開日2009-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal Structure of the Lipoprotein_17 domain from Q9PRA0_UREPA protein of Ureaplasma parvum.
To be Published
8AYL
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BU of 8ayl by Molmil
Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 5-[2-(4-fluorophenyl)-7-(4-oxidanylpiperidin-1-yl)pyrazolo[1,5-c]pyrimidin-3-yl]-1,3-dihydroindol-2-one, ...
著者Zhang, D, Lape, R, Shaikh, S, Kohegyi, B, Watson, J.F, Cais, O, Nakagawa, T, Greger, I.
登録日2022-09-02
公開日2023-04-19
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Modulatory mechanisms of TARP gamma 8-selective AMPA receptor therapeutics.
Nat Commun, 14, 2023
3JRX
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Crystal structure of the BC domain of ACC2 in complex with soraphen A
分子名称: Acetyl-CoA carboxylase 2, SORAPHEN A
著者Cho, Y.S, Lee, J.I, Shin, D, Kim, H.T, Lee, T.G, Heo, Y.S.
登録日2009-09-09
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular mechanism for the regulation of human ACC2 through phosphorylation by AMPK.
Biochem.Biophys.Res.Commun., 391, 2010
3JYQ
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Quinate dehydrogenase from Corynebacterium glutamicum in complex with shikimate and NADH
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Quinate/shikimate dehydrogenase
著者Hoeppner, A, Schomburg, D, Niefind, K.
登録日2009-09-22
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination.
Biol.Chem., 394, 2013
8BF8
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ISDra2 TnpB in complex with reRNA
分子名称: Deinococcus radiodurans R1 chromosome 1, RNA-guided DNA endonuclease TnpB
著者Sasnauskas, G, Tamulaitiene, G, Carabias, A, Siksnys, V, Montoya, G, Druteika, G, Silanskas, A, Venclovas, C, Karvelis, T, Kazlauskas, D.
登録日2022-10-24
公開日2023-04-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献TnpB structure reveals minimal functional core of Cas12 nuclease family.
Nature, 616, 2023
3JV4
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Crystal structure of the dimerization domains p50 and RelB
分子名称: Nuclear factor NF-kappa-B p105 subunit, Transcription factor RelB
著者Vu, D, Huang, D.B, Ghosh, G.
登録日2009-09-15
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献A structural basis for selective dimerization by NF-kappa B RelB.
J.Mol.Biol., 425, 2013
3K1F
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BU of 3k1f by Molmil
Crystal structure of RNA Polymerase II in complex with TFIIB
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Kostrewa, D, Zeller, M.E, Armache, K.-J, Seizl, M, Leike, K, Thomm, M, Cramer, P.
登録日2009-09-27
公開日2009-11-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献RNA polymerase II-TFIIB structure and mechanism of transcription initiation.
Nature, 462, 2009
3J1W
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A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
分子名称: Protein PrgH
著者Sgourakis, N.G, Worrall, L.J, Strynadka, N.C.J, Baker, D.
登録日2012-07-10
公開日2013-05-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013
3J3X
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Independent reconstruction of Mm-cpn cryo-EM density map from half dataset in the closed state (training map)
分子名称: Chaperonin
著者DiMaio, F, Zhang, J, Chiu, W, Baker, D.
登録日2013-05-02
公開日2013-05-29
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM model validation using independent map reconstructions.
Protein Sci., 22, 2013
3J9P
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Structure of the TRPA1 ion channel determined by electron cryo-microscopy
分子名称: Maltose-binding periplasmic protein, Transient receptor potential cation channel subfamily A member 1 chimera
著者Paulsen, C.E, Armache, J.-P, Gao, Y, Cheng, Y, Julius, D.
登録日2015-02-14
公開日2015-04-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.24 Å)
主引用文献Structure of the TRPA1 ion channel suggests regulatory mechanisms.
Nature, 520, 2015
3JBH
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TWO HEAVY MEROMYOSIN INTERACTING-HEADS MOTIFS FLEXIBLE DOCKED INTO TARANTULA THICK FILAMENT 3D-MAP ALLOWS IN DEPTH STUDY OF INTRA- AND INTERMOLECULAR INTERACTIONS
分子名称: MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE, MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE, MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE
著者Alamo, L, Qi, D, Wriggers, W, Pinto, A, Zhu, J, Bilbao, A, Gillilan, R.E, Hu, S, Padron, R.
登録日2015-09-01
公開日2016-03-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Conserved Intramolecular Interactions Maintain Myosin Interacting-Heads Motifs Explaining Tarantula Muscle Super-Relaxed State Structural Basis.
J. Mol. Biol., 428, 2016
3JCG
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Cryo-EM structure of the magnesium channel CorA in the magnesium-free, asymmetric open state I
分子名称: Magnesium transport protein CorA
著者Matthies, D, Perozo, E, Subramaniam, S.
登録日2015-12-11
公開日2016-02-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.06 Å)
主引用文献Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.
Cell(Cambridge,Mass.), 164, 2016
3JD2
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Glutamate dehydrogenase in complex with NADH, open conformation
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glutamate dehydrogenase 1, mitochondrial
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-28
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
3K2G
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Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides
分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, MAGNESIUM ION, Resiniferatoxin-binding, ...
著者Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-09-30
公開日2009-10-13
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides
To be Published
3K73
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Crystal Structure of Phosphate bound Holo Glyceraldehyde-3-phosphate dehydrogenase 1 from MRSA252 at 2.5 Angstrom resolution
分子名称: Glyceraldehyde-3-phosphate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION
著者Mukherjee, S, Dutta, D, Saha, B, Das, A.K.
登録日2009-10-12
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 1 from methicillin-resistant Staphylococcus aureus MRSA252 provides novel insights into substrate binding and catalytic mechanism.
J.Mol.Biol., 401, 2010

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件を2025-06-04に公開中

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