Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 results

8A9A
DownloadVisualize
BU of 8a9a by Molmil
Single Particle cryo-EM of the lipid binding protein P116 (MPN213) from Mycoplasma pneumoniae at 3.3 Angstrom resolution.
Descriptor: Lipid binding protein P116 (MPN213)
Authors:Sprankel, L, Vizarraga, D.
Deposit date:2022-06-28
Release date:2023-02-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas.
Nat.Struct.Mol.Biol., 30, 2023
3FWG
DownloadVisualize
BU of 3fwg by Molmil
Ferric camphor bound Cytochrome P450cam, Arg365Leu, Glu366Gln, monoclinic crystal form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Schlichting, I, Von Koenig, K, Aldag, C, Hilvert, D.
Deposit date:2009-01-18
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Probing the role of the proximal heme ligand in cytochrome P450cam by recombinant incorporation of selenocysteine.
Proc.Natl.Acad.Sci.USA, 106, 2009
3UQ4
DownloadVisualize
BU of 3uq4 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F247L (F16L)
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3FT2
DownloadVisualize
BU of 3ft2 by Molmil
Crystal Structure of a citrulline peptide variant of the minor histocompatibility peptide HA-1 in complex with HLA-A2
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
Deposit date:2009-01-12
Release date:2009-04-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
5TC3
DownloadVisualize
BU of 5tc3 by Molmil
Structure of IMP dehydrogenase from Ashbya gossypii bound to ATP and GDP
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Fernandez-Justel, D, de Pereda, J.M, Revuelta, J.L, Buey, R.M.
Deposit date:2016-09-14
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.462 Å)
Cite:A nucleotide-controlled conformational switch modulates the activity of eukaryotic IMP dehydrogenases.
Sci Rep, 7, 2017
3UTB
DownloadVisualize
BU of 3utb by Molmil
Crystal Structure of Nucleosome Core Particle Assembled with the 146b Alpha-Satellite Sequence (NCP146b)
Descriptor: 146-mer DNA, Histone H2A, Histone H2B 1.1, ...
Authors:Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A.
Deposit date:2011-11-25
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanics behind DNA sequence-dependent properties of the nucleosome
Nucleic Acids Res., 40, 2012
3FT3
DownloadVisualize
BU of 3ft3 by Molmil
Crystal Structure of the minor histocompatibility peptide HA-1His in complex with HLA-A2
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Reiser, J.-B, Gras, S, Chouquet, A, Le Gorrec, M, Spierings, E, Goulmy, E, Housset, D.
Deposit date:2009-01-12
Release date:2009-04-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Steric hindrance and fast dissociation explain the lack of immunogenicity of the minor histocompatibility HA-1Arg Null allele.
J.Immunol., 182, 2009
3SXW
DownloadVisualize
BU of 3sxw by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
Descriptor: Glucose-6-phosphate isomerase
Authors:Vorobiev, S, Su, M, Nivon, L, Seetharaman, J, Patel, P, Xiao, R, Maglaqui, M, Ciccosanti, C, Baker, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-07-15
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
To be Published
2JBO
DownloadVisualize
BU of 2jbo by Molmil
Protein kinase MK2 in complex with an inhibitor (crystal form-1, soaking)
Descriptor: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MAP KINASE-ACTIVATED PROTEIN KINASE 2, PHOSPHATE ION
Authors:Hillig, R.C, Eberspaecher, U, Monteclaro, F, Huber, M, Nguyen, D, Mengel, A, Muller-Tiemann, B, Egner, U.
Deposit date:2006-12-09
Release date:2007-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for a High Affinity Inhibitor Bound to Protein Kinase Mk2.
J.Mol.Biol., 369, 2007
7LUP
DownloadVisualize
BU of 7lup by Molmil
Human TRiC/CCT complex with reovirus outer capsid protein sigma-3
Descriptor: Outer capsid protein sigma-3, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
Authors:Knowlton, J.J, Gestaut, D, Ma, B, Taylor, G, Seven, A.B, Leitner, A, Wilson, G.J, Shanker, S, Yates, N.A, Prasad, B.V.V, Aebersold, R, Chiu, W, Frydman, J, Dermody, T.S.
Deposit date:2021-02-22
Release date:2021-03-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.
Proc.Natl.Acad.Sci.USA, 118, 2021
5TJB
DownloadVisualize
BU of 5tjb by Molmil
I-II linker of TRPML1 channel at pH 4.5
Descriptor: Mucolipin-1
Authors:Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
Deposit date:2016-10-04
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
3FWF
DownloadVisualize
BU of 3fwf by Molmil
Ferric camphor bound cytochrome P450cam containing a Selenocysteine as the 5th heme ligand, monoclinic crystal form
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Schlichting, I, Von Koenig, K, Aldag, C, Hilvert, D.
Deposit date:2009-01-18
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Probing the role of the proximal heme ligand in cytochrome P450cam by recombinant incorporation of selenocysteine.
Proc.Natl.Acad.Sci.USA, 106, 2009
3URI
DownloadVisualize
BU of 3uri by Molmil
Endothiapepsin-DB5 complex.
Descriptor: DB5 peptide, Endothiapepsin
Authors:Bailey, D, Sanz-Aparicio, J, Albert, A, Cooper, J.B.
Deposit date:2011-11-22
Release date:2012-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases.
Acta Crystallogr.,Sect.D, 68, 2012
5T6U
DownloadVisualize
BU of 5t6u by Molmil
Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin K, SULFATE ION
Authors:Law, S, Aguda, A, Nguyen, N, Brayer, G, Bromme, D.
Deposit date:2016-09-01
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib.
Biochem. J., 474, 2017
3FXV
DownloadVisualize
BU of 3fxv by Molmil
Identification of an N-oxide pyridine GW4064 analogue as a potent FXR agonist
Descriptor: 12-meric peptide from Nuclear receptor coactivator 1, 6-(4-{[3-(3,5-dichloropyridin-4-yl)-5-(1-methylethyl)isoxazol-4-yl]methoxy}-2-methylphenyl)-1-methyl-1H-indole-3-carbox ylic acid, NR1H4 protein
Authors:Feng, S, Yang, M, He, Y, Chen, L, Zhang, Z, Wang, Z, Hong, D, Richter, H, Benson, G.M, Bleicher, K, Grether, U, Martin, R, Plancher, J.-M, Kuhn, B, Rudolph, M.G.
Deposit date:2009-01-21
Release date:2009-04-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Identification of an N-oxide pyridine GW4064 analog as a potent FXR agonist
Bioorg.Med.Chem.Lett., 19, 2009
3UWB
DownloadVisualize
BU of 3uwb by Molmil
Crystal structure of a probable peptide deformylase from strucynechococcus phage S-SSM7 in complex with actinonin
Descriptor: 1,2-ETHANEDIOL, ACTINONIN, CHLORIDE ION, ...
Authors:Lorimer, D, Abendroth, J, Edwards, T.E, Burgin, A, Segall, A, Rohwer, F.
Deposit date:2011-12-01
Release date:2013-01-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
3FZ6
DownloadVisualize
BU of 3fz6 by Molmil
Crystal structure of glutamate decarboxylase beta from Escherichia coli: complex with xenon
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate decarboxylase beta, XENON
Authors:Malashkevich, V.N, De Biase, D, Bossa, F.
Deposit date:2009-01-23
Release date:2009-02-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Crystal structure of glutamate decarboxylase beta from Escherichia coli: complex with xenon
To be Published
3US8
DownloadVisualize
BU of 3us8 by Molmil
Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: Isocitrate dehydrogenase [NADP], SULFATE ION
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-11-23
Release date:2011-12-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
To be Published
3UWL
DownloadVisualize
BU of 3uwl by Molmil
Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with 5-formyl tetrahydrofolate
Descriptor: 1,2-ETHANEDIOL, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
Authors:Pozzi, C, Catalano, A, Cortesi, D, Luciani, R, Ferrari, S, Fritz, T, Costi, M.P, Mangani, S.
Deposit date:2011-12-02
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The structure of Enterococcus faecalis thymidylate synthase provides clues about folate bacterial metabolism.
Acta Crystallogr.,Sect.D, 68, 2012
2JIC
DownloadVisualize
BU of 2jic by Molmil
High resolution structure of xylanase-II from one micron beam experiment
Descriptor: XYLANASE-II
Authors:Moukhametzianov, R, Burghammer, M, Edwards, P.C, Petitdemange, S, Popov, D, Fransen, M, Schertler, G.F, Riekel, C.
Deposit date:2007-02-27
Release date:2008-05-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Protein Crystallography with a Micrometre-Sized Synchrotron-Radiation Beam.
Acta Crystallogr.,Sect.D, 64, 2008
5T75
DownloadVisualize
BU of 5t75 by Molmil
Human carbonic anhydrase II G132C_C206S double mutant in complex with SA-2
Descriptor: 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
Deposit date:2016-09-02
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
2JDS
DownloadVisualize
BU of 2jds by Molmil
Structure of cAMP-dependent protein kinase complexed with A-443654
Descriptor: (2S)-1-(1H-INDOL-3-YL)-3-{[5-(3-METHYL-1H-INDAZOL-5-YL)PYRIDIN-3-YL]OXY}PROPAN-2-AMINE, CAMP-DEPENDENT PROTEIN KINASE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA
Authors:Davies, T.G, Verdonk, M.L, Graham, B, Saalau-Bethell, S, Hamlett, C.C.F, McHardy, T, Collins, I, Garrett, M.D, Workman, P, Woodhead, S.J, Jhoti, H, Barford, D.
Deposit date:2007-01-12
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Structural Comparison of Inhibitor Binding to Pkb, Pka and Pka-Pkb Chimera
J.Mol.Biol., 367, 2007
2JI3
DownloadVisualize
BU of 2ji3 by Molmil
X-ray structure of the iron-peroxide intermediate of superoxide reductase (E114A mutant) from Desulfoarculus baarsii
Descriptor: CALCIUM ION, Desulfoferrodoxin, FE (III) ION, ...
Authors:Katona, G, Carpentier, P, Niviere, V, Amara, P, Adam, V, Ohana, J, Tsanov, N, Bourgeois, D.
Deposit date:2007-02-24
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316, 2007
2JEO
DownloadVisualize
BU of 2jeo by Molmil
Crystal structure of human uridine-cytidine kinase 1
Descriptor: URIDINE-CYTIDINE KINASE 1
Authors:Kosinska, U, Stenmark, P, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg Schiavone, L, Hogbom, M, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E.P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Uppenberg, J, Uppsten, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Welin, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-01-18
Release date:2007-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Human Uridine-Cytidine Kinase 1
To be Published
5T8L
DownloadVisualize
BU of 5t8l by Molmil
Crystal structure of Snf7 under 350 MPa
Descriptor: Vacuolar-sorting protein SNF7
Authors:Huang, Q, Szebenyi, D.
Deposit date:2016-09-07
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Snf7 under 350 MPa
To Be Published

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon