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PDB: 22172 results

2AGL
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Crystal structure of the phenylhydrazine adduct of aromatic amine dehydrogenase from Alcaligenes faecalis
Descriptor: 1-PHENYLHYDRAZINE, Aromatic amine dehydrogenase
Authors:Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
Deposit date:2005-07-27
Release date:2006-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2AGY
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Crystal structure of the Schiff base intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. Monoclinic form
Descriptor: 2-(1H-INDOL-3-YL)ETHANIMINE, Aromatic amine dehydrogenase
Authors:Masgrau, L, Roujeinikova, A, Johannissen, L.O, Hothi, P, Basran, J, Ranaghan, K.E, Mulholland, A.J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
Deposit date:2005-07-27
Release date:2006-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic description of an enzyme reaction dominated by proton tunneling
Science, 312, 2006
2D0V
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BU of 2d0v by Molmil
Crystal structure of methanol dehydrogenase from Hyphomicrobium denitrificans
Descriptor: CALCIUM ION, PYRROLOQUINOLINE QUINONE, methanol dehydrogenase large subunit, ...
Authors:Nojiri, M, Hira, D, Yamaguchi, K, Suzuki, S.
Deposit date:2005-08-09
Release date:2006-08-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins
Biochemistry, 45, 2006
2CZS
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BU of 2czs by Molmil
Crystal Structure Analysis of the Diheme c-type Cytochrome DHC2
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, SULFATE ION, ...
Authors:Heitmann, D, Einsle, O.
Deposit date:2005-07-15
Release date:2005-10-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Biochemical Characterization of DHC2, a Novel Diheme Cytochrome c from Geobacter sulfurreducens
Biochemistry, 44, 2005
6NRC
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BU of 6nrc by Molmil
hTRiC-hPFD Class3
Descriptor: Prefoldin subunit 1, Prefoldin subunit 2, Prefoldin subunit 3, ...
Authors:Gestaut, D, Roh, S.H, Ma, B, Pintilie, G, Joachimiak, L.A, Leitner, A, Walzthoeni, T, Aebersold, R, Chiu, W, Frydman, J.
Deposit date:2019-01-23
Release date:2019-06-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis.
Cell, 177, 2019
6NR9
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hTRiC-hPFD Class5
Descriptor: Prefoldin subunit 1, Prefoldin subunit 2, Prefoldin subunit 3, ...
Authors:Gestaut, D, Roh, S.H, Ma, B, Pintilie, G, Joachimiak, L.A, Leitner, A, Walzthoeni, T, Aebersold, R, Chiu, W, Frydman, J.
Deposit date:2019-01-23
Release date:2019-06-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis.
Cell, 177, 2019
6FF4
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BU of 6ff4 by Molmil
human Bact spliceosome core structure
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
Authors:Haselbach, D, Komarov, I, Agafonov, D, Hartmuth, K, Graf, B, Kastner, B, Luehrmann, R, Stark, H.
Deposit date:2018-01-03
Release date:2018-08-29
Last modified:2020-10-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and Conformational Dynamics of the Human Spliceosomal BactComplex.
Cell, 172, 2018
3NHD
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GYVLGS segment 127-132 from human prion with V129
Descriptor: ACETIC ACID, Major prion protein
Authors:Apostol, M.I, Eisenberg, D.
Deposit date:2010-06-14
Release date:2010-08-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease.
J.Biol.Chem., 285, 2010
2D1K
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Ternary complex of the WH2 domain of mim with actin-dnase I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chereau, D, Kerff, F, Dominguez, R.
Deposit date:2005-08-26
Release date:2006-09-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the actin-binding function of missing-in-metastasis
Structure, 15, 2007
6NM2
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NMR Structure of WW291
Descriptor: WW291 peptide
Authors:Wang, G, Zarena, D.
Deposit date:2019-01-10
Release date:2020-07-15
Last modified:2020-09-09
Method:SOLUTION NMR
Cite:The pi Configuration of the WWW Motif of a Short Trp-Rich Peptide Is Critical for Targeting Bacterial Membranes, Disrupting Preformed Biofilms, and Killing Methicillin-Resistant Staphylococcus aureus.
Biochemistry, 56, 2017
1LPU
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BU of 1lpu by Molmil
Low Temperature Crystal Structure of the Apo-form of the catalytic subunit of protein kinase CK2 from Zea mays
Descriptor: BENZAMIDINE, Protein kinase CK2
Authors:Niefind, K, Puetter, M, Guerra, B, Issinger, O.-G, Schomburg, D.
Deposit date:2002-05-08
Release date:2002-05-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Inclining the purine base binding plane in protein kinase CK2 by exchanging the flanking side-chains generates a preference for ATP as a cosubstrate.
J.Mol.Biol., 347, 2005
6NQT
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GalNac-T2 soaked with UDP-sugar
Descriptor: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{R})-3-(hex-5-ynoylamino)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Fernandez, D, Bertozzi, C.R, Schumann, B, Agbay, A.
Deposit date:2019-01-21
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells.
Mol.Cell, 78, 2020
2C6Z
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crystal structure of dimethylarginine dimethylaminohydrolase I in complex with citrulline
Descriptor: CITRIC ACID, CITRULLINE, NG, ...
Authors:Frey, D, Braun, O, Briand, C, Vasak, M, Grutter, M.G.
Deposit date:2005-11-16
Release date:2006-05-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of the Mammalian Nos Regulator Dimethylarginine Dimethylaminohydrolase: A Basis for the Design of Specific Inbitors
Structure, 14, 2006
2CBX
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BU of 2cbx by Molmil
X-ray crystal structure of 5'-fluorodeoxyadenosine synthase from Streptomyces cattleya complexed with beta-D-erythrofuranosyl- adenosine
Descriptor: 5'-FLUORO-5'-DEOXYADENOSINE SYNTHASE, BETA-D-ERYTHROFURANOSYL-ADENOSINE, GLYCEROL
Authors:McEwan, A.R, Cadicamo, C.D, Deng, H, McGlinchey, R.P, Robinson, D.R, O'Hagan, D, Naismith, J.H, Spencer, J.
Deposit date:2006-01-09
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate specificity in enzymatic fluorination. The fluorinase from Streptomyces cattleya accepts 2'-deoxyadenosine substrates.
Org. Biomol. Chem., 4, 2006
2CGK
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BU of 2cgk by Molmil
Crystal Structure of L-rhamnulose kinase from Escherichia coli in an open uncomplexed conformation.
Descriptor: L-RHAMNULOSE KINASE
Authors:Grueninger, D, Schulz, G.E.
Deposit date:2006-03-09
Release date:2006-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure and Reaction Mechanism of L-Rhamnulose Kinase from Escherichia Coli.
J.Mol.Biol., 359, 2006
6NU5
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BU of 6nu5 by Molmil
Pyruvate Kinase M2 Mutant - S437Y in Complex with L-cysteine
Descriptor: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CYSTEINE, ...
Authors:Srivastava, D, Nandi, S, Dey, M.
Deposit date:2019-01-30
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic and Structural Insights into Cysteine-Mediated Inhibition of Pyruvate Kinase Muscle Isoform 2.
Biochemistry, 58, 2019
2C7P
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BU of 2c7p by Molmil
HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAH
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-D(*G*GP*AP*TP*GP*(5CM*2PR)*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*CP*GP*CP*AP*TP*CP*C)-3', ...
Authors:Neely, R.K, Daujotyte, D, Grazulis, S, Magennis, S.W, Dryden, D.T.F, Klimasauskas, S, Jones, A.C.
Deposit date:2005-11-25
Release date:2005-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes.
Nucleic Acids Res., 33, 2005
2CDE
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BU of 2cde by Molmil
Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR
Descriptor: INKT-TCR
Authors:Gadola, S.D, Koch, M, Marles-Wright, J, Lissin, N.M, Sheperd, D, Matulis, G, Harlos, K, Villiger, P.M, Stuart, D.I, Jakobsen, B.K, Cerundolo, V, Jones, E.Y.
Deposit date:2006-01-23
Release date:2006-03-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structrue and Binding Kinetics of Three Different Human Cd1D-Alpha-Galactosylceramide-Specific T Cell Receptors
J.Exp.Med., 203, 2006
1LF2
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BU of 1lf2 by Molmil
CRYSTAL STRUCTURE OF PLASMEPSIN II FROM P FALCIPARUM IN COMPLEX WITH INHIBITOR RS370
Descriptor: 3-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE, Plasmepsin 2
Authors:Asojo, O.A, Afonina, E, Gulnik, S.V, Yu, B, Erickson, J.W, Randad, R, Mehadjed, D, Silva, A.M.
Deposit date:2002-04-10
Release date:2002-10-10
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Ser205 mutant plasmepsin II from Plasmodium falciparum at 1.8 A in complex with the inhibitors rs367 and rs370.
Acta Crystallogr.,Sect.D, 58, 2002
6O2L
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BU of 6o2l by Molmil
NMR structure of the 2:1 complex of a carbazole derivative BMVC bound to c-MYC G-quadruplex
Descriptor: 3,6-bis[(E)-2-(1-methylpyridin-1-ium-4-yl)ethenyl]-9H-carbazole, DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3')
Authors:Lin, C, Liu, W, Yang, D.
Deposit date:2019-02-24
Release date:2019-10-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures of 1:1 and 2:1 complexes of BMVC and MYC promoter G-quadruplex reveal a mechanism of ligand conformation adjustment for G4-recognition.
Nucleic Acids Res., 47, 2019
2EB6
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Crystal structure of HpcG complexed with Mg ion
Descriptor: 2-oxo-hept-3-ene-1,7-dioate hydratase, MAGNESIUM ION
Authors:Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H.
Deposit date:2007-02-07
Release date:2007-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli
J.Mol.Biol., 370, 2007
6CFF
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Stimulator of Interferon Genes Human
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Stimulator of interferon genes protein
Authors:Fernandez, D, Li, L, Ergun, S.L.
Deposit date:2018-02-14
Release date:2019-03-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:STING Polymer Structure Reveals Mechanisms for Activation, Hyperactivation, and Inhibition.
Cell, 178, 2019
3NR6
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BU of 3nr6 by Molmil
Crystal structure of xenotropic murine leukemia virus-related virus (XMRV) protease
Descriptor: PHOSPHATE ION, POTASSIUM ION, Protease p14
Authors:Lubkowski, J, Li, M, Gustchina, A, Zhou, D, Dauter, Z, Wlodawer, A.
Deposit date:2010-06-30
Release date:2011-02-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of XMRV protease differs from the structures of other retropepsins.
Nat.Struct.Mol.Biol., 18, 2011
3NVH
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BU of 3nvh by Molmil
MIHFGND segment 137-143 from mouse prion
Descriptor: Major prion protein, trifluoroacetic acid
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
1KCZ
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Crystal Structure of beta-methylaspartase from Clostridium tetanomorphum. Mg-complex.
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, beta-methylaspartase
Authors:Asuncion, M, Blankenfeldt, W, Barlow, J.N, Gani, D, Naismith, J.H.
Deposit date:2001-11-12
Release date:2001-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of 3-methylaspartase from Clostridium tetanomorphum functions via the common enolase chemical step.
J.Biol.Chem., 277, 2002

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