2CDE

Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR

Summary for 2CDE

Related1B88 1BWM 1H5B 1HXM 1KTK 1L0Y 1TVD 2AXH 2AXJ 2CDF 2CDG 1AO7 1QRN 1QSE 1QSF 1BD2 1LP9 1MI5 2BNR 2BNU 1KGC 1FO0 1KJ2 1NAM 2CKB 1G6R 2BNQ 1MWA 1KB5 1NFD 1TCR 1FYT 1J8H 1D9K 1YMM 1YPZ 1ZT4 1Z5L 1ZHN 2AKR 1CD1 1U3H
DescriptorINKT-TCR (2 entities in total)
Functional Keywordscell receptor, t cell receptor, tcr, natural killer t cell, cd1d, alpha- galactosylceramide, mhc class i
Biological sourceHOMO SAPIENS (HUMAN)
Total number of polymer chains6
Total molecular weight147144.59
Authors
Gadola, S.D.,Koch, M.,Marles-Wright, J.,Lissin, N.M.,Sheperd, D.,Matulis, G.,Harlos, K.,Villiger, P.M.,Stuart, D.I.,Jakobsen, B.K.,Cerundolo, V.,Jones, E.Y. (deposition date: 2006-01-23, release date: 2006-03-07, Last modification date: 2011-07-13)
Primary citation
Gadola, S.D.,Koch, M.,Marles-Wright, J.,Lissin, N.M.,Sheperd, D.,Matulis, G.,Harlos, K.,Villiger, P.M.,Stuart, D.I.,Jakobsen, B.K.,Cerundolo, V.,Jones, E.Y.
Structrue and Binding Kinetics of Three Different Human Cd1D-Alpha-Galactosylceramide-Specific T Cell Receptors
J.Exp.Med., 203:699-, 2006
PubMed: 16520393 (PDB entries with the same primary citation)
DOI: 10.1084/JEM.20052369
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.5 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.320464.2%6.4%2.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2cde
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Molmil generated image of 2cde
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Molmil generated image of 2cde
rotated about y axis by 90°