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PDB: 22053 results

5FLI
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enzyme-substrate complex of Ni-quercetinase
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, NICKEL (II) ION, QUERCETINASE QUED
Authors:Jeoung, J.-H, Nianios, D, Fetzner, S, Dobbek, H.
Deposit date:2015-10-26
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Quercetin 2,4-Dioxygenase Activates Dioxygen in a Side-On O2-Ni Complex.
Angew. Chem. Int. Ed. Engl., 55, 2016
5FLE
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High resolution NI,FE-CODH-320 mV with CN state
Descriptor: CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ciaccafava, A, Tombolelli, D, Domnik, L, Fesseler, J, Jeoung, J.-H, Dobbek, H, Mroginski, M.A, Hildebrandt, P, Zebger, I.
Deposit date:2015-10-26
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:When the inhibitor tells more than the substrate: the cyanide-bound state of a carbon monoxide dehydrogenase.
Chem Sci, 7, 2016
5FBL
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BU of 5fbl by Molmil
PI4KB in complex with Rab11 and the MI356 Inhibitor
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.372 Å)
Cite:PI4KB in complex with Rab11 and the MI356 Inhibitor
To Be Published
5F81
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Acoustic injectors for drop-on-demand serial femtosecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Roessler, C.G, Agarwal, R, Allaire, M, Alonso-Mori, R, Andi, B, Bachega, J.F.R, Bommer, M, Brewster, A.S, Browne, M.C, Chatterjee, R, Cho, E, Cohen, A.E, Cowan, M, Datwani, S, Davidson, V.L, Defever, J, Eaton, B, Ellson, R, Feng, Y, Ghislain, L.P, Glownia, J.M, Han, G, Hattne, J, Hellmich, J, Heroux, A, Ibrahim, M, Kern, J, Kuczewski, A, Lemke, H.T, Liu, P, Majlof, L, McClintock, W.M, Myers, S, Nelsen, S, Olechno, J, Orville, A.M, Sauter, N.K, Soares, A.S, Soltis, M.S, Song, H, Stearns, R.G, Tran, R, Tsai, Y, Uervirojnangkoorn, M, Wilmot, C.M, Yachandra, V, Yano, J, Yukl, E.T, Zhu, D, Zouni, A.
Deposit date:2015-12-08
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography.
Structure, 24, 2016
5FBV
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BU of 5fbv by Molmil
PI4KB in complex with Rab11 and the MI364 Inhibitor
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.285 Å)
Cite:PI4KB in complex with Rab11 and the MI364 Inhibitor
To Be Published
1VZI
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BU of 1vzi by Molmil
Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray induced photoreduction
Descriptor: CALCIUM ION, CHLORIDE ION, DESULFOFERRODOXIN, ...
Authors:Adam, V, Royant, A, Niviere, V, Molina-Heredia, F.P, Bourgeois, D.
Deposit date:2004-05-19
Release date:2004-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction.
Structure, 12, 2004
1W0U
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BU of 1w0u by Molmil
hTRF2 DNA-binding domain in complex with telomeric DNA.
Descriptor: 5'-D(*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP *CP*CP*CP*TP*AP*GP*A)-3', 5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*TP*AP *GP*GP*GP*TP*TP*AP*G)-3', TELOMERIC REPEAT BINDING FACTOR 2
Authors:Court, R.I, Chapman, L.M, Fairall, L, Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
1W0T
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BU of 1w0t by Molmil
hTRF1 DNA-binding domain in complex with telomeric DNA.
Descriptor: 5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*GP*TP *TP*AP*GP*GP*GP*TP*TP*AP*G)-3', 5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP *AP*CP*CP*CP*TP*AP*AP*CP*A)-3', TELOMERIC REPEAT BINDING FACTOR 1
Authors:Court, R.I, Chapman, L.M, Fairall, L, Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
1W9H
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BU of 1w9h by Molmil
The Structure of a Piwi protein from Archaeoglobus fulgidus.
Descriptor: CADMIUM ION, CHLORIDE ION, HYPOTHETICAL PROTEIN AF1318, ...
Authors:Parker, J.S, Roe, S.M, Barford, D.
Deposit date:2004-10-13
Release date:2005-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of a Piwi Protein Suggests Mechanisms for Sirna Recognition and Slicer Activity
Embo J., 23, 2004
1W6U
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BU of 1w6u by Molmil
Structure of human DECR ternary complex
Descriptor: 2,4-DIENOYL-COA REDUCTASE, MITOCHONDRIAL PRECURSOR, HEXANOYL-COENZYME A, ...
Authors:Alphey, M.S, Byres, E, Li, D, Hunter, W.N.
Deposit date:2004-08-24
Release date:2004-10-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and Reactivity of Human Mitochondrial 2,4-Dienoyl-Coa Reductase: Enzyme-Ligand Interactions in a Distinctive Short-Chain Reductase Active Site
J.Biol.Chem., 280, 2005
5FHT
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BU of 5fht by Molmil
HtrA2 protease mutant V226K
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, POTASSIUM ION, ...
Authors:Golik, P, Dubin, G, Zurawa-Janicka, D, Lipinska, B, Jarzab, M, Wenta, T, Gieldon, A, Ciarkowski, A.
Deposit date:2015-12-22
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Distinct 3D Architecture and Dynamics of the Human HtrA2(Omi) Protease and Its Mutated Variants.
Plos One, 11, 2016
5FIS
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BU of 5fis by Molmil
Exonuclease domain-containing 1 (Exd1) in the Gd bound conformation
Descriptor: EXD1, GADOLINIUM ATOM
Authors:Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S.
Deposit date:2015-10-02
Release date:2015-12-23
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway
Mol.Cell, 61, 2016
1VZS
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BU of 1vzs by Molmil
Solution structure of subunit F6 from the peripheral stalk region of ATP synthase from bovine heart mitochondria
Descriptor: ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR
Authors:Carbajo, R.J, Silvester, J.A, Runswick, M.J, Walker, J.E, Neuhaus, D.
Deposit date:2004-05-25
Release date:2004-09-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of Subunit F(6) from the Peripheral Stalk Region of ATP Synthase from Bovine Heart Mitochondria
J.Mol.Biol., 342, 2004
5FLC
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BU of 5flc by Molmil
Architecture of human mTOR Complex 1 - 5.9 Angstrom reconstruction
Descriptor: FKBP, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, REGULATORY-ASSOCIATED PROTEIN OF MTOR, ...
Authors:Aylett, C.H.S, Sauer, E, Imseng, S, Boehringer, D, Hall, M.N, Ban, N, Maier, T.
Deposit date:2015-10-23
Release date:2015-12-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Architecture of Human Mtor Complex 1
Science, 351, 2016
5FO3
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BU of 5fo3 by Molmil
ZapC cell division regulator from E. coli
Descriptor: CELL DIVISION PROTEIN ZAPC
Authors:Ortiz, C, Kureisaite-Ciziene, D, Schmitz, F, Vicente, M, Lowe, J.
Deposit date:2015-11-18
Release date:2015-11-25
Last modified:2016-01-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Z-Ring Associated Cell Division Protein Zapc from Escherichia Coli.
FEBS Lett., 589, 2015
5FOE
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BU of 5foe by Molmil
Crystal structure of the C. elegans Protein O-fucosyltransferase 2 (CePOFUT2) double mutant (R298K-R299K) in complex with GDP and the human TSR1 from thrombospondin 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GDP-fucose protein O-fucosyltransferase 2,Thrombospondin-1, ...
Authors:Valero-Gonzalez, J, Leonhard-Melief, C, Lira-Navarrete, E, Jimenez-Oses, G, Hernandez-Ruiz, C, Pallares, M.C, Yruela, I, Vasudevan, D, Lostao, A, Corzana, F, Takeuchi, H, Haltiwanger, R.S, Hurtado-Guerrero, R.
Deposit date:2015-11-19
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A Proactive Role of Water Molecules in Acceptor Recognition of Thrombospondin Type 1 Repeats by Protein-O-Fucosyltransferase 2
Nat.Chem.Biol., 12, 2016
5FQ2
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BU of 5fq2 by Molmil
Crystal structure of human SUMO E1 UFD domain in complex with Ubc9 in a P422 space group.
Descriptor: SUMO-ACTIVATING ENZYME SUBUNIT 2, SUMO-CONJUGATING ENZYME UBC9
Authors:Liu, B, Castano, L, Lois, M, Reverter, D.
Deposit date:2015-12-04
Release date:2016-11-16
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Crystal Structure of Human Sumo E1 Ufd Domain in Complex with Ubc9.
To be Published
5FTK
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BU of 5ftk by Molmil
Cryo-EM structure of human p97 bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE
Authors:Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
5G05
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BU of 5g05 by Molmil
Cryo-EM structure of combined apo phosphorylated APC
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
Authors:Zhang, S, Chang, L, Alfieri, C, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D.
Deposit date:2016-03-16
Release date:2016-05-25
Last modified:2019-09-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular Mechanism of Apc/C Activation by Mitotic Phosphorylation.
Nature, 533, 2016
1WRR
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BU of 1wrr by Molmil
Urate oxidase from aspergillus flavus complexed with 5-amino 6-nitro uracil
Descriptor: 5-AMINO-6-NITROPYRIMIDINE-2,4(1H,3H)-DIONE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-10-27
Release date:2005-03-22
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
1WS3
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BU of 1ws3 by Molmil
Urate oxidase from aspergillus flavus complexed with uracil
Descriptor: URACIL, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-10-29
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
5FKI
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BU of 5fki by Molmil
Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data
Descriptor: CHLORIDE ION, UL31, UL34 protein, ...
Authors:Hagen, C, Dent, K.C, Zeev Ben Mordehai, T, Vasishtan, D, Antonin, W, Mettenleiter, T.C, Gruenewald, K.
Deposit date:2015-10-16
Release date:2016-03-16
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights Into Inner Nuclear Membrane Remodelling
Cell Rep., 13, 2015
5FSG
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BU of 5fsg by Molmil
Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design
Descriptor: MALTOSE-BINDING PERIPLASMIC PROTEIN, HANTAVIRUS NUCLEOPROTEIN, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Olal, D, Daumke, O.
Deposit date:2016-01-05
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Structure of the Hantavirus Nucleoprotein Provides Insights Into the Mechanism of RNA Encapsidation.
Cell Rep., 14, 2016
5FTL
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Cryo-EM structure of human p97 bound to ATPgS (Conformation I)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE
Authors:Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
1WDL
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BU of 1wdl by Molmil
fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4)
Descriptor: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, ...
Authors:Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
Deposit date:2004-05-17
Release date:2004-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004

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