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PDB: 53012 件

1VAF
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Inducible nitric oxide synthase oxygenase domain complexed with the inhibitor AR-R17477
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, N-(4-{2-[(3-CHLOROBENZYL)AMINO]ETHYL}PHENYL)THIOPHENE-2-CARBOXIMIDAMIDE, Nitric oxide synthase, ...
著者Fedorov, R, Vasan, R, Ghosh, D.K, Schlichting, I.
登録日2004-02-16
公開日2004-06-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of nitric oxide synthase isoforms complexed with the inhibitor AR-R17477 suggest a rational basis for specificity and inhibitor design
Proc.Natl.Acad.Sci.USA, 101, 2004
1V1T
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Crystal structure of the PDZ tandem of human syntenin in complex with TNEYKV peptide
分子名称: BENZOIC ACID, SYNTENIN 1, TNEYKV PEPTIDE
著者Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, U, Derewenda, Z.S.
登録日2004-04-23
公開日2005-06-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Binding of the Pdz Tandem of Syntenin to Target Proteins.
Biochemistry, 45, 2006
1URV
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Crystal structure of cytoglobin: the fourth globin type discovered in man displays heme hexa-coordination
分子名称: CYTOGLOBIN, HEXACYANOFERRATE(3-), PROTOPORPHYRIN IX CONTAINING FE
著者de Sanctis, D, Dewilde, S, Pesce, A, Moens, L, Ascenzi, P, Hankeln, T, Burmester, T, Bolognesi, M.
登録日2003-11-11
公開日2004-12-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Cytoglobin: The Fourth Globin Type Discovered in Man Displays Heme Hexa-Coordination.
J.Mol.Biol., 336, 2004
6MBN
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LptB E163Q in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Lipopolysaccharide export system ATP-binding protein LptB, ...
著者Owens, T.W, Ruiz, N, Kahne, D.
登録日2018-08-30
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.957 Å)
主引用文献Combining Mutations That Inhibit Two Distinct Steps of the ATP Hydrolysis Cycle Restores Wild-Type Function in the Lipopolysaccharide Transporter and Shows that ATP Binding Triggers Transport.
Mbio, 10, 2019
6MD1
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Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Oleic acid
分子名称: 2-chloro-5-nitro-N-phenylbenzamide, OLEIC ACID, Peroxisome proliferator-activated receptor gamma
著者Shang, J, Kojetin, D.J.
登録日2018-09-03
公開日2019-01-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
6LZL
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Crystal structure of human dihydroorotate dehydrogenase (DHODH) with Piperine
分子名称: (2E,4E)-5-(2H-1,3-benzodioxol-5-yl)-1-(piperidin-1-yl)penta-2,4-dien-1-one, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
著者Liu, Z.H, Wu, D, Lu, W.Q, Huang, J.
登録日2020-02-19
公開日2020-04-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure of human dihydroorotate dehydrogenase (DHODH) with Piperine
To Be Published
6MCZ
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Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Arachidonic Acid
分子名称: ARACHIDONIC ACID, Peroxisome proliferator-activated receptor gamma
著者Shang, J, Kojetin, D.J.
登録日2018-09-03
公開日2019-01-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
4ZIF
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BU of 4zif by Molmil
Crystal Structure of core/latch dimer of Bax in complex with BimBH3mini
分子名称: Apoptosis regulator BAX, Bcl-2-like protein 11
著者Robin, A.Y, Krishna Kumar, K, Westphal, D, Wardak, A.Z, Thompson, G.V, Dewson, G, Colman, P.M, Czabotar, P.E.
登録日2015-04-28
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Crystal structure of Bax bound to the BH3 peptide of Bim identifies important contacts for interaction.
Cell Death Dis, 6, 2015
6DHA
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Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Hydroxy Pioglitazone (M-IV)
分子名称: Hydroxy Pioglitazone (M-IV), Peroxisome proliferator-activated receptor gamma, nonanoic acid
著者Shang, J, Mosure, S.A, Kojetin, D.J.
登録日2018-05-18
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural Basis of Altered Potency and Efficacy Displayed by a Major in Vivo Metabolite of the Antidiabetic PPAR gamma Drug Pioglitazone.
J. Med. Chem., 62, 2019
4Z9B
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Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with benzylphosphonic acid
分子名称: Low molecular weight phosphotyrosine protein phosphatase, benzylphosphonic acid
著者Fonseca, E.M.B, Trivella, D.B.B, Scorsato, V, Dias, M.P, de Oliveira, F.L, Miranda, P.C.M.L, Aparicio, R.
登録日2015-04-10
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates.
Bioorg.Med.Chem., 23, 2015
4ZCU
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Structure of calcium-bound regulatory domain of the human ATP-Mg/Pi carrier in the P2 form
分子名称: CALCIUM ION, Calcium-binding mitochondrial carrier protein SCaMC-1, GLYCEROL, ...
著者Harborne, S.P.D, Ruprecht, J.J, Kunji, E.R.S.
登録日2015-04-16
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Calcium-induced conformational changes in the regulatory domain of the human mitochondrial ATP-Mg/Pi carrier.
Biochim.Biophys.Acta, 1847, 2015
4ZGI
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BU of 4zgi by Molmil
Structure of Truncated Human TIFA
分子名称: TRAF-interacting protein with FHA domain-containing protein A
著者Weng, J.H, Wei, T.Y.W, Hsieh, Y.C, Huang, C.C.F, Wu, P.Y.G, Chen, E.S.W, Huang, K.F, Chen, C.J, Tsai, M.D.
登録日2015-04-23
公開日2015-10-14
最終更新日2015-10-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Uncovering the Mechanism of Forkhead-Associated Domain-Mediated TIFA Oligomerization That Plays a Central Role in Immune Responses.
Biochemistry, 54, 2015
6DIY
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BU of 6diy by Molmil
YTFGQ segment from Human Immunoglobulin Light-Chain Variable Domain, Residues 96-100, assembled as an amyloid fibril
分子名称: YTFGQ segment Light-Chain Variable Domain Kappa AL09
著者Brumshtein, B, Esswein, S.R, Sawaya, M.R, Eisenberg, D.S.
登録日2018-05-24
公開日2018-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Identification of two principal amyloid-driving segments in variable domains of Ig light chains in systemic light-chain amyloidosis.
J. Biol. Chem., 293, 2018
2E1Y
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Crystal structure of propionate kinase (TdcD) from Salmonella typhimurium
分子名称: Propionate kinase
著者Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-11-04
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of Salmonella typhimurium propionate kinase and its complex with Ap4A: evidence for a novel Ap4A synthetic activity.
Proteins, 70, 2008
2EB1
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BU of 2eb1 by Molmil
Crystal Structure of the C-Terminal RNase III Domain of Human Dicer
分子名称: Endoribonuclease Dicer, MAGNESIUM ION
著者Takeshita, D, Zenno, S, Lee, W.C, Nagata, K, Saigo, K, Tanokura, M.
登録日2007-02-05
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Homodimeric Structure and Double-stranded RNA Cleavage Activity of the C-terminal RNase III Domain of Human Dicer
J.Mol.Biol., 374, 2007
6DLV
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BU of 6dlv by Molmil
Cryo-EM of the GTP-bound human dynamin-1 polymer assembled on the membrane in the super constricted state
分子名称: Dynamin-1
著者Kong, L, Wang, H, Fang, S, Canagarajah, B, Kehr, A.D, Rice, W.J, Hinshaw, J.E.
登録日2018-06-02
公開日2018-08-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (10.1 Å)
主引用文献Cryo-EM of the dynamin polymer assembled on lipid membrane.
Nature, 560, 2018
6DWS
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BU of 6dws by Molmil
Crystal structure of human GRP78 in complex with (2R,3R,4S,5R)-2-(6-amino-8-((2-chlorobenzyl)amino)-9H-purin-9-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
分子名称: 8-{[(2-chlorophenyl)methyl]amino}adenosine, Endoplasmic reticulum chaperone BiP, MAGNESIUM ION
著者Chen, Y, Antoshchenko, T, Smil, D, Zepeda, C, Huang, Y, Park, H.W.
登録日2018-06-27
公開日2019-07-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human GRP78 in complex with (2R,3R,4S,5R)-2-(6-amino-8-((2-chlorobenzyl)amino)-9H-purin-9-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
To Be Published
4ZLK
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BU of 4zlk by Molmil
Crystal structure of mouse myosin-5a in complex with calcium-bound calmodulin
分子名称: CALCIUM ION, Calmodulin, Unconventional myosin-Va
著者Shen, M, Zhang, N, Zheng, S, Zhang, W.-B, Zhang, H.-M, Lu, Z, Su, Q.P, Sun, Y, Ye, K, Li, X.-D.
登録日2015-05-01
公開日2016-05-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural basis for calcium regulation of myosin 5 motor function
To Be Published
6DZ9
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BU of 6dz9 by Molmil
Solution structure of Rbfox2 RRM mimetic peptide CPfox2
分子名称: CPfox2
著者Sun, Y.-T, Shortridge, M.D, Varani, G.
登録日2018-07-03
公開日2019-05-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b.
Chembiochem, 20, 2019
2E6F
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Crystal structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with oxonate
分子名称: COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, ...
著者Inaoka, D.K, Shimizu, H, Sakamoto, K, Shiba, T, Kurisu, G, Nara, T, Aoki, T, Harada, S, Kita, K.
登録日2006-12-26
公開日2008-01-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Crystal structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with oxonate
To be Published
2E3W
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X-ray structure of native RNase A
分子名称: CHLORIDE ION, Ribonuclease pancreatic
著者Boerema, D.J, Tereshko, V.A, Kent, S.B.H.
登録日2006-11-30
公開日2007-10-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Total synthesis by modern chemical ligation methods and high resolution (1.1 A) X-ray structure of ribonuclease A
Biopolymers, 90, 2008
4UBD
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Crystal structure of a neutralizing human monoclonal antibody with 1968 H3 HA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Shore, D.A, Yang, H, Cho, M, Donis, R.O, Stevens, J.
登録日2014-08-12
公開日2015-06-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus.
Nat Commun, 6, 2015
6E5J
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Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn, beta3 helix, N-methyl hairpin
分子名称: Designed peptide NC_HEE_D1: Aib turn, beta3 helix, N-methyl hairpin mutant
著者Cabalteja, C.C, Mihalko, D.S, Horne, W.S.
登録日2018-07-20
公開日2018-11-21
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein.
Chembiochem, 20, 2019
2EPE
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Crystal structure analysis of Hen egg white lysozyme grown by capillary method
分子名称: Lysozyme C
著者Naresh, M.D, Subramanian, V, Jaimohan, S.M, Rajaram, A, Arumugam, V, Usha, R, Mandal, A.B.
登録日2007-03-29
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure analysis of Hen egg white lysozyme grown by capillary method
To be published
1AN4
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STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF
分子名称: DNA (5'-D(*CP*AP*CP*CP*CP*GP*GP*TP*CP*AP*CP*GP*TP*GP*GP*CP*C P*TP*AP*CP*A)-3'), DNA (5'-D(*GP*TP*GP*TP*AP*GP*GP*CP*CP*AP*CP*GP*TP*GP*AP*CP*C P*GP*GP*GP*T)-3'), PROTEIN (UPSTREAM STIMULATORY FACTOR)
著者Ferre-D'Amare, A.R, Pognonec, P, Roeder, R.G, Burley, S.K.
登録日1997-03-15
公開日1997-09-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and function of the b/HLH/Z domain of USF.
EMBO J., 13, 1994

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