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PDB: 27 results

4Q7J
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BU of 4q7j by Molmil
Complex structure of viral RNA polymerase
Descriptor: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu 1, ...
Authors:Takeshita, D.
Deposit date:2014-04-25
Release date:2014-08-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular insights into replication initiation by Q beta replicase using ribosomal protein S1.
Nucleic Acids Res., 42, 2014
4FWT
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BU of 4fwt by Molmil
Complex structure of viral RNA polymerase form III
Descriptor: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2012-07-02
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
4O0L
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BU of 4o0l by Molmil
Crystal structure of NADPH-Dependent 3-Quinuclidinone Reductase from Rhodotorula Rubra
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-dependent 3-quinuclidinone reductase
Authors:Takeshita, D, Tanokura, M.
Deposit date:2013-12-13
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of stereospecific reduction by quinuclidinone reductase
AMB Express, 4, 2014
2DOK
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BU of 2dok by Molmil
Crystal structure of the PIN domain of human EST1A
Descriptor: Telomerase-binding protein EST1A
Authors:Takeshita, D.
Deposit date:2006-05-01
Release date:2007-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the PIN domain of human telomerase-associated protein EST1A
Proteins, 68, 2007
2EB1
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BU of 2eb1 by Molmil
Crystal Structure of the C-Terminal RNase III Domain of Human Dicer
Descriptor: Endoribonuclease Dicer, MAGNESIUM ION
Authors:Takeshita, D, Zenno, S, Lee, W.C, Nagata, K, Saigo, K, Tanokura, M.
Deposit date:2007-02-05
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Homodimeric Structure and Double-stranded RNA Cleavage Activity of the C-terminal RNase III Domain of Human Dicer
J.Mol.Biol., 374, 2007
3AVT
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BU of 3avt by Molmil
Structure of viral RNA polymerase complex 1
Descriptor: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.607 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVU
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BU of 3avu by Molmil
Structure of viral RNA polymerase complex 2
Descriptor: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.907 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVW
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BU of 3avw by Molmil
Structure of viral RNA polymerase complex 4
Descriptor: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVV
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BU of 3avv by Molmil
Structure of viral RNA polymerase complex 3
Descriptor: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.119 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVX
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BU of 3avx by Molmil
Structure of viral RNA polymerase complex 5
Descriptor: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3AVY
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BU of 3avy by Molmil
Structure of viral RNA polymerase complex 6
Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2011-03-08
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.616 Å)
Cite:Molecular basis for RNA polymerization by Q beta replicase
Nat.Struct.Mol.Biol., 19, 2012
3VNV
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BU of 3vnv by Molmil
Complex structure of viral RNA polymerase II
Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2012-01-18
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3VNU
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BU of 3vnu by Molmil
Complex structure of viral RNA polymerase I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2012-01-18
Release date:2012-08-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism for template-independent terminal adenylation activity of Q beta replicase
Structure, 20, 2012
3AGP
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BU of 3agp by Molmil
Structure of viral polymerase form I
Descriptor: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2010-04-06
Release date:2010-09-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Assembly of Q{beta} viral RNA polymerase with host translational elongation factors EF-Tu and -Ts
Proc.Natl.Acad.Sci.USA, 107, 2010
3AGQ
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BU of 3agq by Molmil
Structure of viral polymerase form II
Descriptor: Elongation factor Ts, Elongation factor Tu 1, LINKER, ...
Authors:Takeshita, D, Tomita, K.
Deposit date:2010-04-06
Release date:2010-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Assembly of Q{beta} viral RNA polymerase with host translational elongation factors EF-Tu and -Ts
Proc.Natl.Acad.Sci.USA, 107, 2010
8I5K
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BU of 8i5k by Molmil
Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera in complex with chitotriose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ABC transporter substrate-binding protein, MAGNESIUM ION
Authors:Ohnuma, T, Takeshita, D.
Deposit date:2023-01-25
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
8I5J
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BU of 8i5j by Molmil
Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera.
Descriptor: ABC transporter substrate-binding protein, MAGNESIUM ION
Authors:Ohnuma, T, Takeshita, D.
Deposit date:2023-01-25
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
3AQL
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BU of 3aql by Molmil
Structure of bacterial protein (apo form II)
Descriptor: GLYCEROL, MAGNESIUM ION, Poly(A) polymerase
Authors:Toh, Y, Takeshita, D, Tomita , K.
Deposit date:2010-11-09
Release date:2011-02-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3AQN
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BU of 3aqn by Molmil
Complex structure of bacterial protein (apo form II)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) polymerase
Authors:Toh, Y, Takeshita, D, Tomita , K.
Deposit date:2010-11-09
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3AQM
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BU of 3aqm by Molmil
Structure of bacterial protein (form II)
Descriptor: MAGNESIUM ION, Poly(A) polymerase
Authors:Toh, Y, Takeshita, D, Tomita , K.
Deposit date:2010-11-09
Release date:2011-02-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3WFR
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BU of 3wfr by Molmil
tRNA processing enzyme complex 2
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Yamashita, S, Takeshita, D, Tomita, K.
Deposit date:2013-07-23
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3WFQ
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BU of 3wfq by Molmil
tRNA processing enzyme complex 1
Descriptor: Poly A polymerase, RNA (73-MER)
Authors:Yamashita, S, Takeshita, D, Tomita, K.
Deposit date:2013-07-23
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.619 Å)
Cite:Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3AQK
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BU of 3aqk by Molmil
Structure of bacterial protein (apo form I)
Descriptor: Poly(A) polymerase
Authors:Toh, Y, Takeshita, D, Tomita , K.
Deposit date:2010-11-09
Release date:2011-02-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases
Structure, 19, 2011
3AK4
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BU of 3ak4 by Molmil
Crystal structure of NADH-dependent quinuclidinone reductase from agrobacterium tumefaciens
Descriptor: NADH-dependent quinuclidinone reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Miyakawa, T, Kataoka, M, Takeshita, D, Nomoto, F, Nagata, K, Shimizu, S, Tanokura, M.
Deposit date:2010-07-07
Release date:2011-07-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of NADH-dependent quinuclidinone reductase from Agrobacterium tumefaciens
To be Published
3WFS
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BU of 3wfs by Molmil
tRNA processing enzyme complex 3
Descriptor: Poly A polymerase, RNA (74-MER), SULFATE ION
Authors:Yamashita, S, Takeshita, D, Tomita, K.
Deposit date:2013-07-23
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.311 Å)
Cite:Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014

 

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