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PDB: 39 件

2OP9
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Substrate Specificity Profiling and Identification of a New Class of Inhibitor for the Major Protease of the SARS Coronavirus
分子名称: NALPHA-[(BENZYLOXY)CARBONYL]-N-[(1R)-4-HYDROXY-1-METHYL-2-OXOBUTYL]-L-PHENYLALANINAMIDE, Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like proteinase (3CL-PRO, ...
著者Craik, C.S, Goetz, D.H.
登録日2007-01-27
公開日2007-07-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Substrate Specificity Profiling and Identification of a New Class of Inhibitor for the Major Protease of the SARS Coronavirus.
Biochemistry, 46, 2007
7TCZ
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Human cytomegalovirus protease mutant (C84A, C87A, C138A, C202A) in complex with inhibitor
分子名称: Assemblin, [1-(2-oxopropyl)-4-phenyl-1H-1,2,3-triazol-5-yl]methyl benzylcarbamate
著者Hulce, K.R, Bohn, M, Ongpipattanakul, C, Jaishankar, P, Renslo, A.R, Craik, C.S.
登録日2021-12-29
公開日2022-01-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Inhibiting a dynamic viral protease by targeting a non-catalytic cysteine.
Cell Chem Biol, 29, 2022
1U9Q
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Crystal structure of cruzain bound to an alpha-ketoester
分子名称: [1-(1-METHYL-4,5-DIOXO-PENT-2-ENYLCARBAMOYL)-2-PHENYL-ETHYL]-CARBAMIC ACID BENZYL ESTER, cruzipain
著者Lange, M, Weston, S.G, Cheng, H, Culliane, M, Fiorey, M.M, Grisostomi, C, Hardy, L.W, Hartstough, D.S, Pallai, P.V, Tilton, R.F, Baldino, C.M, Brinen, L.S, Engel, J.C, Choe, Y, Price, M.S, Craik, C.S.
登録日2004-08-10
公開日2005-03-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Development of alpha-keto-based inhibitors of cruzain, a cysteine protease implicated in Chagas disease
Bioorg.Med.Chem., 13, 2005
4W5B
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Crystal structure analysis of cruzain with Fragment 1 (N-(1H-benzimidazol-2-yl)-1,3-dimethyl-pyrazole-4-carboxamide)
分子名称: Cruzipain, N-(1H-benzimidazol-2-yl)-1,3-dimethyl-1H-pyrazole-4-carboxamide
著者Tochowicz, A, McKerrow, J.H, Craik, C.S.
登録日2014-08-17
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Applying Fragments Based- Drug Design to identify multiple binding modes on cysteine protease.
To Be Published
4W5C
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Crystal structure analysis of cruzain with three Fragments: 1 (N-(1H-benzimidazol-2-yl)-1,3-dimethyl-pyrazole-4-carboxamide), 6 (2-amino-4,6-difluorobenzothiazole) and 9 (N-(1H-benzimidazol-2-yl)-3-(4-fluorophenyl)-1H-pyrazole-4-carboxamide).
分子名称: 4,6-difluoro-1,3-benzothiazol-2-amine, Cruzipain, N-(1H-benzimidazol-2-yl)-1,3-dimethyl-1H-pyrazole-4-carboxamide, ...
著者Tochowicz, A, McKerrow, J.H, Craik, C.S.
登録日2014-08-17
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Applying Fragments Based- Drug Design to identify multiple binding modes on cysteine protease.
To Be Published
2SAM
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STRUCTURE OF THE PROTEASE FROM SIMIAN IMMUNODEFICIENCY VIRUS: COMPLEX WITH AN IRREVERSIBLE NON-PEPTIDE INHIBITOR
分子名称: 3-(4-NITRO-PHENOXY)-PROPAN-1-OL, SIV PROTEASE
著者Rose, R.B, Rose, J.R, Salto, R, Craik, C.S, Stroud, R.M.
登録日1994-07-08
公開日1994-10-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the protease from simian immunodeficiency virus: complex with an irreversible nonpeptide inhibitor.
Biochemistry, 32, 1993
3SO3
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Structures of Fab-Protease Complexes Reveal a Highly Specific Non-Canonical Mechanism of Inhibition.
分子名称: A11 FAB heavy chain, A11 FAB light chain, GLYCEROL, ...
著者Schneider, E.L, Farady, C.J, Egea, P.F, Goetz, D.H, Baharuddin, A, Craik, C.S.
登録日2011-06-29
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A reverse binding motif that contributes to specific protease inhibition by antibodies.
J.Mol.Biol., 415, 2012
5FMG
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Structure and function based design of Plasmodium-selective proteasome inhibitors
分子名称: (2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide, BETA3 PROTEASOME SUBUNIT, PUTATIVE, ...
著者Li, H, O'Donoghue, A.J, van der Linden, W.A, Xie, S.C, Yoo, E, Foe, I.T, Tilley, L, Craik, C.S, da Fonseca, P.C.A, Bogyo, M.
登録日2015-11-04
公開日2016-03-02
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure and Function Based Design of Plasmodium-Selective Proteasome Inhibitors
Nature, 530, 2016
8FYU
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Crystal structure of the human CHIP-TPR domain in complex with a 10mer acetylated tau peptide
分子名称: ACE-SER-SER-THR-GLY-SER-ILE-ASP-MET-VAL-ASP, E3 ubiquitin-protein ligase CHIP
著者Wucherer, K, Bohn, M.F, Basu, K, Nadel, C.M, Gestwicki, J.E, Craik, C.S.
登録日2023-01-26
公開日2023-08-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.84839141 Å)
主引用文献Phosphorylation of tau at a single residue inhibits binding to the E3 ubiquitin ligase, CHIP.
Nat Commun, 15, 2024
3BN9
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Crystal Structure of MT-SP1 in complex with Fab Inhibitor E2
分子名称: 1,2-ETHANEDIOL, E2 Fab Heavy Chain, E2 Fab Light Chain, ...
著者Farady, C.J, Schneider, E.L, Egea, P.F, Goetz, D.H, Craik, C.S.
登録日2007-12-13
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.173 Å)
主引用文献Structure of an Fab-protease complex reveals a highly specific non-canonical mechanism of inhibition
J.Mol.Biol., 380, 2008
6NSV
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Crystal structure of the human CHIP TPR domain in complex with a 5mer acetylated optimized peptide
分子名称: ACE-LEU-TRP-TRP-PRO-ASP, CHLORIDE ION, E3 ubiquitin-protein ligase CHIP, ...
著者Basu, K, Ravalin, M, Bohn, M.-F, Craik, C.S, Gestwicki, J.E.
登録日2019-01-25
公開日2019-07-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.305 Å)
主引用文献Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.
Nat.Chem.Biol., 15, 2019
8GCK
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Crystal structure of the human CHIP-TPR domain in complex with a 6mer acetylated tau peptide
分子名称: ACE-SER-ILE-ASP-MET-VAL-ASP, E3 ubiquitin-protein ligase CHIP
著者Wucherer, K, Bohn, M.F, Basu, K, Nadel, C.M, Gestwicki, J.E, Craik, C.S.
登録日2023-03-02
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.36823535 Å)
主引用文献Intersecting PTMs regulate clearance of pathogenic tau by the ubiquitin ligase CHIP.
To Be Published
6EFK
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Crystal structure of the human CHIP TPR domain in complex with a 5mer acetylated HSP70 peptide
分子名称: ACE-ILE-GLU-GLU-VAL-ASP, E3 ubiquitin-protein ligase CHIP, SODIUM ION
著者Basu, K, Ravalin, M, Bohn, M.-F, Craik, C.S, Gestwicki, J.E.
登録日2018-08-16
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.
Nat.Chem.Biol., 15, 2019
5UTE
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Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-[(4-methoxyphenyl)amino]benzoic acid, ORF 17
著者Acker, T.M, Gable, J, Bohn, M.-F, Craik, C.S.
登録日2017-02-14
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
To Be Published
5V5E
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Room temperature (280K) crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with allosteric inhibitor (compound 733)
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-{[3-(trifluoromethoxy)phenyl]amino}benzoic acid, ORF 17
著者Thompson, M.C, Acker, T.M, Fraser, J.S, Craik, C.S.
登録日2017-03-14
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Allosteric Inhibitors, Crystallography, and Comparative Analysis Reveal Network of Coordinated Movement across Human Herpesvirus Proteases.
J. Am. Chem. Soc., 139, 2017
5UTN
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Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-[(4-fluorophenyl)amino]benzoic acid, CHLORIDE ION, ORF 17
著者Acker, T.M, Gable, J, Bohn, M.-F, Craik, C.S.
登録日2017-02-15
公開日2017-03-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
To Be Published
5V5D
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Room temperature (280K) crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with allosteric inhibitor (compound 250)
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-(phenylamino)benzoic acid, ORF 17
著者Thompson, M.C, Acker, T.M, Fraser, J.S, Craik, C.S.
登録日2017-03-14
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Allosteric Inhibitors, Crystallography, and Comparative Analysis Reveal Network of Coordinated Movement across Human Herpesvirus Proteases.
J. Am. Chem. Soc., 139, 2017
5UV3
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Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-{[3-(trifluoromethoxy)phenyl]amino}benzoic acid, ORF 17
著者Acker, T.M, Gable, J, Bohn, M.-F, Craik, C.S.
登録日2017-02-17
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
To Be Published
5UVP
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Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
分子名称: 6-(cyclohexylmethyl)-N-{2-[(oxan-4-yl)oxy]-4-(1H-tetrazol-5-yl)phenyl}pyridine-2-carboxamide, ORF 17
著者Acker, T.M, Gable, J, Bohn, M.-F, Craik, C.S.
登録日2017-02-20
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
To Be Published
5UR3
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Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
分子名称: 4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-(phenylamino)benzoic acid, KSHV protease
著者Acker, T.M, Gable, J, Bohn, M.-F, Craik, C.S.
登録日2017-02-09
公開日2017-03-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
To Be Published
6BGJ
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Cryo-EM structure of the TMEM16A calcium-activated chloride channel in LMNG
分子名称: Anoctamin-1, CALCIUM ION
著者Dang, S, Feng, S, Tien, J, Peters, C.J, Bulkley, D, Lolicato, M, Zhao, J, Zuberbuhler, K, Ye, W, Qi, L, Chen, T, Craik, C.S, Jan, Y.N, Minor Jr, D.L, Cheng, Y, Jan, L.Y.
登録日2017-10-28
公開日2017-12-27
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structures of the TMEM16A calcium-activated chloride channel.
Nature, 552, 2017
6BGI
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Cryo-EM structure of the TMEM16A calcium-activated chloride channel in nanodisc
分子名称: Anoctamin-1, CALCIUM ION
著者Dang, S, Feng, S, Tien, J, Peters, C.J, Bulkley, D, Lolicato, M, Zhao, J, Zuberbuhler, K, Ye, W, Qi, J, Chen, T, Craik, C.S, Jan, Y.N, Minor Jr, D.L, Cheng, Y, Jan, L.Y.
登録日2017-10-28
公開日2017-12-27
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structures of the TMEM16A calcium-activated chloride channel.
Nature, 552, 2017
1KZK
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JE-2147-HIV Protease Complex
分子名称: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
登録日2002-02-06
公開日2002-04-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure
Biochemistry, 41, 2002
1ORF
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The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Granzyme A, SULFATE ION
著者Bell, J.K, Goetz, D.H, Mahrus, S, Harris, J.L, Fletterick, R.J, Craik, C.S.
登録日2003-03-12
公開日2003-07-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The oligomeric structure of human granzyme A is a determinant of its extended substrate specificity.
Nat.Struct.Biol., 10, 2003
1Z8G
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Crystal structure of the extracellular region of the transmembrane serine protease hepsin with covalently bound preferred substrate.
分子名称: ACE-LYS-GLN-LEU-ARG-Chloromethylketone, Serine protease hepsin
著者Herter, S, Piper, D.E, Aaron, W, Gabriele, T, Cutler, G, Cao, P, Bhatt, A.S, Choe, Y, Craik, C.S, Walker, N, Meininger, D, Hoey, T, Austin, R.J.
登録日2005-03-30
公開日2005-05-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Hepatocyte growth factor is a preferred in vitro substrate for human hepsin, a membrane-anchored serine protease implicated in prostate and ovarian cancers
Biochem.J., 390, 2005

 

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