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PDB: 668 results

4JGJ
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Crystal structure of the Ig-like D1 domain from mouse Carcinoembryogenic antigen-related cell adhesion molecule 15 (CEACAM15) [PSI-NYSGRC-005691]
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Carcinoembryonic antigen-related cell adhesion molecule 15, Unknown peptide
Authors:Kumar, P.R, Bonanno, J, Ahmed, M, Banu, R, Bhosle, R, Calarese, D, Celikigil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S, Glenn, A.S, Hillerich, B, Khafizov, K, Love, J, Patel, H, Seidel, R, Stead, M, Toro, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-03-01
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6508 Å)
Cite:Crystal structure of the Ig-like D1 domain of CEACAM15 from Mus musculus [NYSGRC-005691]
to be published
5XEP
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Crystal structure of BRP39, a chitinase-like protein, at 2.6 Angstorm resolution
Descriptor: 1,2-ETHANEDIOL, Chitinase-3-like protein 1
Authors:Mohanty, A.K, Fisher, A.J, Choudhary, S, Kaushik, J.K.
Deposit date:2017-04-05
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of BRP39, a signalling glycoprotein expressed during mammary gland apoptosis.
To be published
1CNU
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PHOSPHORYLATED ACTOPHORIN FROM ACANTAMOEBA POLYPHAGA
Descriptor: ACTOPHORIN
Authors:Blanchoin, L, Robinson, R.C, Choe, S, Pollard, T.D.
Deposit date:1999-05-24
Release date:1999-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Interaction of actin monomers with Acanthamoeba actophorin (ADF/cofilin) and profilin.
J.Biol.Chem., 273, 1998
5LAO
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S-nitrosylated 3D NMR structure of the cytoplasmic rhodanese domain of the inner membrane protein YgaP from Escherichia coli
Descriptor: Inner membrane protein YgaP
Authors:Eichmann, C, Tzitzilonis, C, Nakamura, T, Maslennikov, I, Kwiatkowski, W, Choe, S, Lipton, S.A, Guntert, P, Riek, R.
Deposit date:2016-06-14
Release date:2016-08-17
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein.
J.Mol.Biol., 428, 2016
8FF2
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Amyloid-beta (1-40) fibrils derived from a CAA patient
Descriptor: Amyloid-beta precursor protein
Authors:Crooks, E.J, Fu, Z, Chowdhury, S, Smith, S.O.
Deposit date:2022-12-07
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:An electrostatic cluster guides A beta 40 fibril formation in sporadic and Dutch-type cerebral amyloid angiopathy.
J.Struct.Biol., 216, 2024
5LAM
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Refined 3D NMR structure of the cytoplasmic rhodanese domain of the inner membrane protein YgaP from Escherichia coli
Descriptor: Inner membrane protein YgaP
Authors:Eichmann, C, Tzitzilonis, C, Nakamura, T, Maslennikov, I, Kwiatkowski, W, Choe, S, Lipton, S.A, Guntert, P, Riek, R.
Deposit date:2016-06-14
Release date:2016-08-17
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein.
J.Mol.Biol., 428, 2016
1YGM
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NMR structure of Mistic
Descriptor: hypothetical protein BSU31320
Authors:Roosild, T.P, Greenwald, J, Vega, M, Castronovo, S, Riek, R, Choe, S.
Deposit date:2005-01-05
Release date:2005-03-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of Mistic, a membrane-integrating protein for membrane protein expression.
Science, 307, 2005
4KNP
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Crystal Structure Of a Putative enoyl-coA hydratase (PSI-NYSGRC-019597) from Mycobacterium avium paratuberculosis K-10
Descriptor: enoyl-CoA hydratase
Authors:Kumar, P.R, Ahmed, M, Attonito, J, Bhosle, R, Chamala, S, Chowdhury, S, Glenn, A.S, Hammonds, J, Hillerich, B, Love, J.D, Seidel, R, Stead, M, Toro, R, Wasserman, S.R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-05-10
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Crystal structure of a Putative enoyl-coA hydratase from Mycobacterium avium paratuberculosis K-10
to be published
8CU6
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Crystal structure of A2AAR-StaR2-S277-bRIL in complex with a novel A2a antagonist, LJ-4517
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
Authors:Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
Deposit date:2022-05-16
Release date:2022-08-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022
8CU7
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Crystal structure of A2AAR-StaR2-bRIL in complex with a novel A2a antagonist, LJ-4517
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
Authors:Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
Deposit date:2022-05-16
Release date:2022-08-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022
4KKN
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Crystal structure of bovine CTLA-4, PSI-NYSGRC-012704
Descriptor: Cytotoxic T-lymphocyte associated protein 4, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, P.R, Ahmed, M, Banu, R, Bhosle, R, Bonanno, J, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chowdhury, S, Fiser, A, Garforth, S.J, Scott Glenn, A, Hammonds, J, Hillerich, B, Khafizov, K, Lafleur, J, Attonito, J, Love, J.D, Patel, H, Patel, R, Seidel, R.D, Smith, B, Stead, M, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2013-05-06
Release date:2013-06-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Crystal structure of bovine CTLA-4, PSI-NYSGRC-012704
to be published
4KTO
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BU of 4kto by Molmil
Crystal Structure Of a Putative Isovaleryl-CoA dehydrogenase (PSI-NYSGRC-012251) from Sinorhizobium meliloti 1021
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, isovaleryl-CoA dehydrogenase
Authors:Kumar, P.R, Ahmed, M, Attonito, J, Bhosle, R, Bonanno, J, Chamala, S, Chowdhury, S, Glenn, A.S, Hammonds, J, Hillerich, B, Himmel, D, Love, J.D, Seidel, R, Stead, M, Toro, R, Wasserman, S.R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-05-20
Release date:2013-06-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.137 Å)
Cite:Crystal structure of a Putative Isovaleryl-CoA dehydrogenase from Sinorhizobium meliloti 1021
to be published
3TVZ
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BU of 3tvz by Molmil
Structure of Bacillus subtilis HmoB
Descriptor: Putative uncharacterized protein yhgC
Authors:Choe, J, Choi, S, Park, S.
Deposit date:2011-09-21
Release date:2012-07-11
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus subtilis HmoB is a heme oxygenase with a novel structure.
Bmb Rep, 45, 2012
1A68
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BU of 1a68 by Molmil
CRYSTAL STRUCTURE OF THE TETRAMERIZATION DOMAIN OF THE SHAKER POTASSIUM CHANNEL
Descriptor: POTASSIUM CHANNEL KV1.1
Authors:Kreusch, A, Pfaffinger, P.J, Stevens, C.F, Choe, S.
Deposit date:1998-03-06
Release date:1998-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the tetramerization domain of the Shaker potassium channel.
Nature, 392, 1998
1B8K
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BU of 1b8k by Molmil
Neurotrophin-3 from Human
Descriptor: PROTEIN (NEUROTROPHIN-3)
Authors:Robinson, R.C, Radziejewski, C, Stuart, D.I, Jones, E.Y, Choe, S.
Deposit date:1999-02-01
Release date:1999-02-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structures of the neurotrophin 4 homodimer and the brain-derived neurotrophic factor/neurotrophin 4 heterodimer reveal a common Trk-binding site.
Protein Sci., 8, 1999
1B8M
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BU of 1b8m by Molmil
BRAIN DERIVED NEUROTROPHIC FACTOR, NEUROTROPHIN-4
Descriptor: PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR), PROTEIN (NEUROTROPHIN-4)
Authors:Robinson, R.C, Radziejewski, C, Stuart, D.I, Jones, E.Y, Choe, S.
Deposit date:1999-02-01
Release date:1999-02-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of the neurotrophin 4 homodimer and the brain-derived neurotrophic factor/neurotrophin 4 heterodimer reveal a common Trk-binding site.
Protein Sci., 8, 1999
1B98
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BU of 1b98 by Molmil
NEUROTROPHIN 4 (HOMODIMER)
Descriptor: CHLORIDE ION, PROTEIN (NEUROTROPHIN-4)
Authors:Robinson, R.C, Radziejewski, C, Stuart, D.I, Jones, E.Y, Choe, S.
Deposit date:1999-02-22
Release date:1999-02-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of the neurotrophin 4 homodimer and the brain-derived neurotrophic factor/neurotrophin 4 heterodimer reveal a common Trk-binding site.
Protein Sci., 8, 1999
1B9F
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BU of 1b9f by Molmil
MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
Descriptor: CACODYLATE ION, PROTEIN (INTEGRASE), SULFATE ION
Authors:Greenwald, J, Le, V, Butler, S.L, Bushman, F.D, Choe, S.
Deposit date:1999-02-11
Release date:1999-07-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity.
Biochemistry, 38, 1999
1B92
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MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
Descriptor: CACODYLATE ION, PROTEIN (INTEGRASE), SULFATE ION
Authors:Greenwald, J, Le, V, Butler, S.L, Bushman, F.D, Choe, S.
Deposit date:1999-02-19
Release date:1999-07-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity.
Biochemistry, 38, 1999
1B9D
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BU of 1b9d by Molmil
MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
Descriptor: CACODYLATE ION, PROTEIN (INTEGRASE), SULFATE ION
Authors:Greenwald, J, Le, V, Butler, S.L, Bushman, F.D, Choe, S.
Deposit date:1999-02-11
Release date:1999-07-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity.
Biochemistry, 38, 1999
5Z81
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Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Heat shock protein 15, SULFATE ION
Authors:Roy Chowdhury, S, Sen, U.
Deposit date:2018-01-30
Release date:2018-03-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
To Be Published
1BTE
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BU of 1bte by Molmil
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE TYPE II ACTIVIN RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (ACTIVIN RECEPTOR TYPE II)
Authors:Greenwald, J, Fischer, W, Vale, W, Choe, S.
Deposit date:1998-09-01
Release date:1999-02-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Three-finger toxin fold for the extracellular ligand-binding domain of the type II activin receptor serine kinase.
Nat.Struct.Biol., 6, 1999
7TVH
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Hyperlytic variant of Tae1, Type VI secretion amidase effector 1, from Pseudomonas aeruginosa (Cys110Ser)
Descriptor: Peptidoglycan amidase Tse1
Authors:Radkov, A, Saunders, H, Chou, S.
Deposit date:2022-02-04
Release date:2022-07-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Antibacterial potency of type VI amidase effector toxins is dependent on substrate topology and cellular context.
Elife, 11, 2022
6W18
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BU of 6w18 by Molmil
Structure of S. pombe Arp2/3 complex in inactive state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1, ...
Authors:Shaaban, M, Nolen, B.J, Chowdhury, S.
Deposit date:2020-03-03
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state.
Nat.Struct.Mol.Biol., 27, 2020
1T24
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Plasmodium falciparum lactate dehydrogenase complexed with NAD+ and 4-hydroxy-1,2,5-oxadiazole-3-carboxylic acid
Descriptor: 4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID, GLYCEROL, L-lactate dehydrogenase, ...
Authors:Cameron, A, Read, J, Tranter, R, Winter, V.J, Sessions, R.B, Brady, R.L, Vivas, L, Easton, A, Kendrick, H, Croft, S.L, Barros, D, Lavandera, J.L, Martin, J.J, Risco, F, Garcia-Ochoa, S, Gamo, F.J, Sanz, L, Leon, L, Ruiz, J.R, Gabarro, R, Mallo, A, De Las Heras, F.G.
Deposit date:2004-04-20
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity.
J.Biol.Chem., 279, 2004

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