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PDB: 122 results

4P9Y
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BU of 4p9y by Molmil
Structure of ConA/Rh4man
Descriptor: 2-{2-[2-(2-{4-[(alpha-D-mannopyranosyloxy)methyl]-1H-1,2,3-triazol-1-yl}ethoxy)ethoxy]ethoxy}ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate, CALCIUM ION, Concanavalin-A, ...
Authors:Sakai, F, Weiss, M.S, Chen, G.
Deposit date:2014-04-06
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of ConA/Rh4Man
To Be Published
6LQZ
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BU of 6lqz by Molmil
Solution structure of Taf14ET-Sth1EBMC
Descriptor: Nuclear protein STH1/NPS1, Transcription initiation factor TFIID subunit 14
Authors:Wu, B, Chen, G, Chen, Y.
Deposit date:2020-01-15
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Taf14 recognizes a common motif in transcriptional machineries and facilitates their clustering by phase separation.
Nat Commun, 11, 2020
7VFX
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BU of 7vfx by Molmil
The structure of Formyl Peptide Receptor 1 in complex with Gi and peptide agonist fMIFL
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, X.K, Chen, G, Liao, Q.W, Du, Y, Hu, H.L, Ye, D.Q.
Deposit date:2021-09-14
Release date:2022-09-21
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for recognition of N-formyl peptides as pathogen-associated molecular patterns.
Nat Commun, 13, 2022
8WMK
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BU of 8wmk by Molmil
Structure of ConA/Man2
Descriptor: 4-[3-(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
8WMG
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BU of 8wmg by Molmil
Structure of ConA/Man3
Descriptor: 4-[3,5-bis(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
6PKC
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BU of 6pkc by Molmil
Inhibition of Human Menin by VTP-50469
Descriptor: 5-fluoro-2-({4-[7-({trans-4-[(methylsulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N,N-di(propan-2-yl)benzamide, Menin,Menin
Authors:McKeever, B.M, Chen, G, Van Orton, R.
Deposit date:2019-06-29
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Menin-MLL Inhibitor Induces Specific Chromatin Changes and Eradicates Disease in Models of MLL-Rearranged Leukemia.
Cancer Cell, 36, 2019
7LL8
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BU of 7ll8 by Molmil
D-Protein RFX-V1 Bound to the VEGFR1 Domain 2 Site on VEGF-A
Descriptor: Isoform L-VEGF189 of Vascular endothelial growth factor A, RFX-V1
Authors:Marinec, P.S, Landgraf, K.E, Uppalapati, M, Chen, G, Xie, D, Jiang, Q, Zhao, Y, Petriello, A, Deshayes, K, Kent, S.B.H, Ault-Riche, D, Sidhu, S.S.
Deposit date:2021-02-03
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A Non-immunogenic Bivalent d-Protein Potently Inhibits Retinal Vascularization and Tumor Growth.
Acs Chem.Biol., 16, 2021
7LL9
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BU of 7ll9 by Molmil
D-Protein RFX-V2 Bound to the VEGFR1 Domain 3 Site on VEGF-A
Descriptor: Isoform L-VEGF189 of Vascular endothelial growth factor A, RFX-V2
Authors:Marinec, P.S, Landgraf, K.E, Uppalapati, M, Chen, G, Xie, D, Jiang, Q, Zhao, Y, Petriello, A, Deshayes, K, Kent, S.B.H, Ault-Riche, D, Sidhu, S.S.
Deposit date:2021-02-03
Release date:2021-03-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Non-immunogenic Bivalent d-Protein Potently Inhibits Retinal Vascularization and Tumor Growth.
Acs Chem.Biol., 16, 2021
6L5Z
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BU of 6l5z by Molmil
Crystal strucutre of AF9 YEATS domain in complex with a cyclopeptide inhibitor
Descriptor: Protein AF-9, SC0-ALO-ALA-SC3-SC4-NH2
Authors:Li, Y, Chen, G, Li, H.
Deposit date:2019-10-25
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Selective Targeting of AF9 YEATS Domain by Cyclopeptide Inhibitors with Preorganized Conformation.
J.Am.Chem.Soc., 142, 2020
6LK0
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BU of 6lk0 by Molmil
Crystal structure of human wild type TRIP13
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Wang, Y, Huang, J, Li, B, Xue, H, Tricot, G, Hu, L, Xu, Z, Sun, X, Chang, S, Gao, L, Tao, Y, Xu, H, Xie, Y, Xiao, W, Yu, D, Kong, Y, Chen, G, Sun, X, Lian, F, Zhang, N, Wu, X, Mao, Z, Zhan, F, Zhu, W, Shi, J.
Deposit date:2019-12-17
Release date:2020-01-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Small-Molecule Inhibitor Targeting TRIP13 Suppresses Multiple Myeloma Progression.
Cancer Res., 80, 2020
7YFU
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BU of 7yfu by Molmil
Structure of Rpgrip1l CC2
Descriptor: Protein fantom
Authors:He, R, Chen, G, Li, Z, Li, J.
Deposit date:2022-07-09
Release date:2023-05-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the N-terminal coiled-coil domains of the ciliary protein Rpgrip1l.
Iscience, 26, 2023
7YFV
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BU of 7yfv by Molmil
Structure of Rpgrip1l CC1
Descriptor: Protein fantom
Authors:He, R, Chen, G, Li, Z, Li, J.
Deposit date:2022-07-09
Release date:2023-05-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the N-terminal coiled-coil domains of the ciliary protein Rpgrip1l.
Iscience, 26, 2023
8IA8
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BU of 8ia8 by Molmil
Cryo-EM structure of C3aR-Gi-scFv16 bound with E7 peptide
Descriptor: ALA-SER-LYS-LEU-GLY-LEU-ALA-ARG, C3a anaphylatoxin chemotactic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liao, Q, Chen, G, Du, Y, Ye, R.D.
Deposit date:2023-02-08
Release date:2023-05-24
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Cryo-EM structure of C3aR-Gi-scFv16 bound with E7 peptide
To Be Published
6KVB
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BU of 6kvb by Molmil
Structure of an intra-locked G-quadruplex
Descriptor: DNA (28-mer)
Authors:Maity, A, Winnerdy, F.R, Chang, W.D, Chen, G, Phan, A.T.
Deposit date:2019-09-03
Release date:2020-03-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Intra-locked G-quadruplex structures formed by irregular DNA G-rich motifs.
Nucleic Acids Res., 48, 2020
7VF1
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BU of 7vf1 by Molmil
Solution structure of a duplex-quadruplex hybrid formed by d[G4C2] repeats
Descriptor: DNA (14-mer)
Authors:Maity, A, Lim, K.W, Shneider, N.A, Chen, G, Phan, A.T.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A duplex-quadruplex hybrid formed by d[G4C2] repeats
To be published
7X2E
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BU of 7x2e by Molmil
Structure of USH1C PDZ2 and coiled-coil in complex with CDHR2 C-terminal tail
Descriptor: Cadherin-related family member 2, GLYCEROL, Harmonin
Authors:Yan, W, Chen, G, Li, J.
Deposit date:2022-02-25
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the Harmonin PDZ2 and coiled-coil domains in a complex with CDHR2 tail and its implications.
Faseb J., 36, 2022
2QFR
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BU of 2qfr by Molmil
Crystal structure of red kidney bean purple acid phosphatase with bound sulfate
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, ...
Authors:Guddat, L.W, Schenk, G, Gahan, L.R, Elliot, T.W, Leung, E.
Deposit date:2007-06-27
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle.
Bmc Struct.Biol., 8, 2008
7EUO
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BU of 7euo by Molmil
The structure of formyl peptide receptor 1 in complex with Gi and peptide agonist fMLF
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wang, X.K, Chen, G, Liao, Q.W, Du, Y, Hu, H.L, Ye, D.Q.
Deposit date:2021-05-18
Release date:2022-05-25
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for recognition of N-formyl peptides as pathogen-associated molecular patterns.
Nat Commun, 13, 2022
1RF3
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BU of 1rf3 by Molmil
Structurally Distinct Recognition Motifs in Lymphotoxin-B Receptor and CD40 for TRAF-mediated Signaling
Descriptor: 24-residue peptide from Lymphotoxin-B Receptor, TNF receptor associated factor 3
Authors:Li, C, Norris, P.S, Ni, C.Z, Havert, M.L, Chiong, E.M, Tran, B.R, Cabezas, E, Cheng, G, Reed, J.C, Satterthwait, A.C, Ware, C.F, Ely, K.R.
Deposit date:2003-11-07
Release date:2004-07-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structurally distinct recognition motifs in lymphotoxin-beta receptor and CD40 for tumor necrosis factor receptor-associated factor (TRAF)-mediated signaling.
J.Biol.Chem., 278, 2003
7EJX
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BU of 7ejx by Molmil
Structure of the GPR88-Gi1 signaling complex bound to a synthetic ligand
Descriptor: (1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Xu, J, Chen, G, Liu, Z, Du, Y.
Deposit date:2021-04-02
Release date:2022-04-13
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Activation and allosteric regulation of the orphan GPR88-Gi1 signaling complex.
Nat Commun, 13, 2022
7CUK
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BU of 7cuk by Molmil
Structure of a GG mismatch-containing duplex formed by G4C2 repeats
Descriptor: DNA (11-mer)
Authors:Maity, A, Chen, G, Phan, A.T, Winnerdy, F.R.
Deposit date:2020-08-23
Release date:2021-03-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Duplexes Formed by G 4 C 2 Repeats Contain Alternate Slow- and Fast-Flipping G·G Base Pairs.
Biochemistry, 60, 2021
4GJH
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BU of 4gjh by Molmil
Crystal Structure of the TRAF domain of TRAF5
Descriptor: TNF receptor-associated factor 5
Authors:Zhang, P, Reichardt, A, Liang, H, Wang, Y, Cheng, D, Aliyari, R, Cheng, G, Liu, Y.
Deposit date:2012-08-09
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Single Amino Acid Substitutions Confer the Antiviral Activity of the TRAF3 Adaptor Protein onto TRAF5
Sci.Signal., 5, 2012
5GZN
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BU of 5gzn by Molmil
Structure of neutralizing antibody bound to Zika envelope protein
Descriptor: Antibody Heavy chain, Antibody light chain, Genome polyprotein
Authors:Wang, Q, Yang, H, Liu, X, Dai, L, Ma, T, Qi, J, Wong, G, Peng, R, Liu, S, Li, J, Li, S, Song, J, Liu, J, He, J, Yuan, H, Xiong, Y, Liao, Y, Li, J, Yang, J, Tong, Z, Griffin, B, Bi, Y, Liang, M, Xu, X, Cheng, G, Wang, P, Qiu, X, Kobinger, G, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2016-09-29
Release date:2016-12-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
5GZO
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BU of 5gzo by Molmil
Structure of neutralizing antibody bound to Zika envelope protein
Descriptor: Antibody heavy chain, Antibody light chain, Genome polyprotein
Authors:Wang, Q, Yang, H, Liu, X, Dai, L, Ma, T, Qi, J, Wong, G, Peng, R, Liu, S, Li, J, Li, S, Song, J, Liu, J, He, J, Yuan, H, Xiong, Y, Liao, Y, Li, J, Yang, J, Tong, Z, Griffin, B, Bi, Y, Liang, M, Xu, X, Cheng, G, Wang, P, Qiu, X, Kobinger, G, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2016-09-29
Release date:2017-01-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.755 Å)
Cite:Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
4EFO
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BU of 4efo by Molmil
Crystal structure of the ubiquitin-like domain of human TBK1
Descriptor: Serine/threonine-protein kinase TBK1
Authors:Li, J, Li, J, Miyahira, A, Sun, J, Liu, Y, Cheng, G, Liang, H.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.769 Å)
Cite:Crystal structure of the ubiquitin-like domain of human TBK1.
Protein Cell, 3, 2012

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