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PDB: 35 件

3B4Y
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FGD1 (Rv0407) from Mycobacterium tuberculosis
分子名称: CITRATE ANION, COENZYME F420, PROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD1
著者Bashiri, G, Squire, C.J, Moreland, N.M, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
登録日2007-10-25
公開日2008-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of F420-dependent glucose-6-phosphate dehydrogenase FGD1 involved in the activation of the anti-tuberculosis drug candidate PA-824 reveal the basis of coenzyme and substrate binding
J.Biol.Chem., 283, 2008
3C8N
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Crystal structure of apo-FGD1 from Mycobacterium tuberculosis
分子名称: Probable F420-dependent glucose-6-phosphate dehydrogenase FGD1
著者Bashiri, G, Squire, C.J, Moreland, N.J, Baker, E.N.
登録日2008-02-12
公開日2008-04-22
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of F420-dependent glucose-6-phosphate dehydrogenase FGD1 involved in the activation of the anti-tuberculosis drug candidate PA-824 reveal the basis of coenzyme and substrate binding.
J.Biol.Chem., 283, 2008
6EDZ
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Crystal structure of Mycobacterium tuberculosis ICL2 in complex with acetyl-CoA, form I
分子名称: ACETYL COENZYME *A, Isocitrate lyase 2
著者Bashiri, G, Bhusal, R, Leung, I.
登録日2018-08-12
公開日2019-08-14
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Acetyl-CoA-mediated activation of Mycobacterium tuberculosis isocitrate lyase 2.
Nat Commun, 10, 2019
6EDW
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Crystal structure of Mycobacterium tuberculosis ICL2 in the apo form
分子名称: GLYCEROL, Isocitrate lyase 2, MAGNESIUM ION
著者Bashiri, G, Bhusal, R, Leung, I.
登録日2018-08-12
公開日2019-08-14
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Acetyl-CoA-mediated activation of Mycobacterium tuberculosis isocitrate lyase 2.
Nat Commun, 10, 2019
6EE1
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Crystal structure of Mycobacterium tuberculosis ICL2 in complex with acetyl-CoA
分子名称: ACETYL COENZYME *A, Isocitrate lyase 2, MAGNESIUM ION
著者Bashiri, G, Bhusal, R, Leung, I.
登録日2018-08-12
公開日2019-08-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Acetyl-CoA-mediated activation of Mycobacterium tuberculosis isocitrate lyase 2.
Nat Commun, 10, 2019
8G8P
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F420-2/GTP(GDP) complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus
分子名称: COENZYME F420, Coenzyme F420:L-glutamate ligase, GUANOSINE-5'-DIPHOSPHATE, ...
著者Bashiri, G, Squire, C.J.
登録日2023-02-18
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Poly-gamma-glutamylation of biomolecules.
Nat Commun, 15, 2024
6BWH
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Crystal structure of Mycoibacterium tuberculosis Rv2983 in complex with PEP
分子名称: 2-phospho-L-lactate guanylyltransferase, MAGNESIUM ION, PHOSPHOENOLPYRUVATE
著者Bashiri, G, Jirgis, E.N.M, Baker, E.N.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献A revised biosynthetic pathway for the cofactor F420in prokaryotes.
Nat Commun, 10, 2019
6BWG
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Crystal structure of native Rv2983 from Mycobacterium tuberculosis
分子名称: 2-phospho-L-lactate guanylyltransferase
著者Bashiri, G, Jirgis, E.N.M, Baker, E.N.
登録日2017-12-15
公開日2018-12-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A revised biosynthetic pathway for the cofactor F420in prokaryotes.
Nat Commun, 10, 2019
7ULE
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F420-1/GDP complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus
分子名称: (2~{S})-2-[[(2~{S})-2-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-[2,4,8-tris(oxidanylidene)-1,9-dihydropyrimido[4,5-b]quinolin-10-yl]pentoxy]phosphoryl]oxypropanoyl]amino]pentanedioic acid, Coenzyme F420:L-glutamate ligase, GUANOSINE-5'-DIPHOSPHATE, ...
著者Bashiri, G, Squire, C.J.
登録日2022-04-04
公開日2023-04-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Poly-gamma-glutamylation of biomolecules.
Nat Commun, 15, 2024
7ULD
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GTP complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus
分子名称: CARBONATE ION, Coenzyme F420:L-glutamate ligase, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Bashiri, G, Squire, C.J.
登録日2022-04-04
公開日2023-04-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Poly-gamma-glutamylation of biomolecules.
Nat Commun, 15, 2024
7ULF
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l-glutamate/GTP complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus
分子名称: Coenzyme F420:L-glutamate ligase, GAMMA-L-GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Bashiri, G, Squire, C.J.
登録日2022-04-04
公開日2023-04-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Poly-gamma-glutamylation of biomolecules.
Nat Commun, 15, 2024
8G8K
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Crystal structure of Rv1916 (residues 233-398)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Putative isocitrate lyase subunit B
著者Kwai, B.X.C, Bashiri, G, Leung, I.K.H.
登録日2023-02-18
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Mycobacterium tuberculosis Rv1916 is an Acetyl-CoA-Binding Protein.
Chembiochem, 24, 2023
4QVH
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Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein
分子名称: CITRATE ANION, COENZYME A, GLYCEROL, ...
著者Jung, J, Bashiri, G, Johnston, J.M, Baker, E.N.
登録日2014-07-15
公開日2014-12-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein.
J.Struct.Biol., 188, 2014
6XPP
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Crystal structure of itaconate modified Mycobaterium tuberculosis isocitrate lyase
分子名称: 2-methylidenebutanedioic acid, Isocitrate lyase, MAGNESIUM ION
著者Kwai, B.X.C, Bashiri, G, Leung, I.K.H.
登録日2020-07-08
公開日2020-10-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Itaconate is a covalent inhibitor of the Mycobacterium tuberculosis isocitrate lyase.
Rsc Med Chem, 12, 2021
4NS3
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Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis bound with NAD and cobalamin
分子名称: COBALAMIN, Delta-1-pyrroline-5-carboxylate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Lagautriere, T, Bashiri, G, Baker, E.N.
登録日2013-11-27
公開日2015-01-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Use of a "silver bullet" to resolve crystal lattice dislocation disorder: A cobalamin complex of Delta (1)-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis.
J.Struct.Biol., 189, 2015
4XOO
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FMN complex of coenzyme F420:L-glutamate ligase (FbiB) from Mycobacterium tuberculosis (C-terminal domain)
分子名称: Coenzyme F420:L-glutamate ligase, FLAVIN MONONUCLEOTIDE
著者Rehan, A.M, Bashiri, G, Baker, H.M, Baker, E.N, Squire, C.J.
登録日2015-01-16
公開日2016-02-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Elongation of the Poly-gamma-glutamate Tail of F420 Requires Both Domains of the F420: gamma-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis.
J.Biol.Chem., 291, 2016
4XOQ
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F420 complex of coenzyme F420:L-glutamate ligase (FbiB) from Mycobacterium tuberculosis (C-terminal domain)
分子名称: COENZYME F420, Coenzyme F420:L-glutamate ligase, SULFATE ION
著者Rehan, A.M, Bashiri, G, Baker, H.M, Baker, E.N, Squire, C.J.
登録日2015-01-16
公開日2016-02-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Elongation of the Poly-gamma-glutamate Tail of F420 Requires Both Domains of the F420: gamma-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis.
J.Biol.Chem., 291, 2016
4XOM
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Coenzyme F420:L-glutamate ligase (FbiB) from Mycobacterium tuberculosis (C-terminal domain).
分子名称: Coenzyme F420:L-glutamate ligase, SULFATE ION
著者Rehan, A.M, Bashiri, G, Baker, H.M, Baker, E.N, Squire, C.J.
登録日2015-01-16
公開日2016-02-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Elongation of the Poly-gamma-glutamate Tail of F420 Requires Both Domains of the F420: gamma-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis.
J.Biol.Chem., 291, 2016
6O04
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M.tb MenD IntII bound with Inhibitor
分子名称: (1~{R},2~{S},5~{S},6~{S})-2-[(1~{S})-1-[3-[(4-azanylidene-2-methyl-1~{H}-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl (phosphonooxy)phosphoryl]oxyethyl]-1,3-thiazol-3-ium-2-yl]-1,4-bis(oxidanyl)-4-oxidanylidene-butyl]-6-oxidanyl-5-(3-oxid anyl-3-oxidanylidene-prop-1-en-2-yl)oxy-cyclohex-3-ene-1-carboxylic acid, 1,4-dihydroxy-2-naphthoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, ...
著者Johnston, J.M, Bashiri, G, Bulloch, E.M, Jirgis, E.M.N, Nigon, L.V, Chuang, H, Baker, E.N.
登録日2019-02-15
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allosteric regulation of menaquinone (vitamin K2) biosynthesis in the human pathogenMycobacterium tuberculosis.
J.Biol.Chem., 295, 2020
6O0G
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M.tb MenD bound to Intermediate I and Inhibitor
分子名称: 1,4-dihydroxy-2-naphthoic acid, 2-OXOGLUTARIC ACID, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, ...
著者Johnston, J.M, Bashiri, G, Bulloch, E.M.M, Jirgis, E.M.N, Chuang, H, Nigon, L.V, Baker, E.N.
登録日2019-02-16
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric regulation of menaquinone (vitamin K2) biosynthesis in the human pathogenMycobacterium tuberculosis.
J.Biol.Chem., 295, 2020
6O0N
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M.tb MenD with Inhibitor
分子名称: 1,4-dihydroxy-2-naphthoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
著者Johnston, J.M, Ho, N.A.T, Bashiri, G, Bulloch, E.M, Nigon, L.V, Jirgis, E.M.N, Baker, E.N.
登録日2019-02-16
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Allosteric regulation of menaquinone (vitamin K2) biosynthesis in the human pathogenMycobacterium tuberculosis.
J.Biol.Chem., 295, 2020
6O0J
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M.tb MenD with ThDP and Inhibitor bound
分子名称: 1,4-dihydroxy-2-naphthoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, ACETATE ION, ...
著者Johnston, J.M, Bashiri, G, Bulloch, E.M.M, Jirgis, E.M.N, Nigon, L.V, Chuang, H, Ho, N.A.T, Baker, E.N.
登録日2019-02-16
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Allosteric regulation of menaquinone (vitamin K2) biosynthesis in the human pathogenMycobacterium tuberculosis.
J.Biol.Chem., 295, 2020
6OVT
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Crystal Structure of IlvD from Mycobacterium tuberculosis
分子名称: DI(HYDROXYETHYL)ETHER, Dihydroxy-acid dehydratase, FE2/S2 (INORGANIC) CLUSTER, ...
著者Almo, S.C, Grove, T.L, Bonanno, J.B, Baker, E.N, Bashiri, G.
登録日2019-05-08
公開日2019-08-07
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The active site of theMycobacterium tuberculosisbranched-chain amino acid biosynthesis enzyme dihydroxyacid dehydratase contains a 2Fe-2S cluster.
J.Biol.Chem., 294, 2019
4IDS
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Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis
分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase
著者Lagautriere, T, Bashiri, G, Baker, E.N.
登録日2012-12-13
公開日2013-12-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies.
Acta Crystallogr.,Sect.D, 70, 2014
4IDM
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Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis
分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase
著者Lagautriere, T, Bashiri, G, Baker, E.N.
登録日2012-12-12
公開日2013-12-18
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies.
Acta Crystallogr.,Sect.D, 70, 2014

 

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