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PDB: 29 results

2OM9
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Ajulemic acid, a synthetic cannabinoid bound to PPAR gamma
Descriptor: (6AR,10AR)-3-(1,1-DIMETHYLHEPTYL)-1-HYDROXY-6,6-DIMETHYL-6A,7,10,10A-TETRAHYDRO-6H-BENZO[C]CHROMENE-9-CARBOXYLIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Ambrosio, A.L.B, Garratt, R.C.
Deposit date:2007-01-21
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ajulemic Acid, a Synthetic Nonpsychoactive Cannabinoid Acid, Bound to the Ligand Binding Domain of the Human Peroxisome Proliferator-activated Receptor gamma
J.Biol.Chem., 282, 2007
8EC6
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Cryo-EM structure of the Glutaminase C core filament (fGAC)
Descriptor: Isoform 2 of Glutaminase kidney isoform, mitochondrial, PHOSPHATE ION
Authors:Ambrosio, A.L, Dias, S.M, Quesnay, J.E, Portugal, R.V, Cassago, A, van Heel, M.G, Islam, Z, Rodrigues, C.T.
Deposit date:2022-09-01
Release date:2023-09-20
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular mechanism of glutaminase activation through filamentation and the role of filaments in mitophagy protection.
Nat.Struct.Mol.Biol., 30, 2023
3CQD
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Structure of the tetrameric inhibited form of phosphofructokinase-2 from Escherichia coli
Descriptor: 6-phosphofructokinase isozyme 2, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Ambrosio, A.L, Cabrera, R, Caniuguir, A, Garratt, R.C, Babul, J.
Deposit date:2008-04-02
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystallographic structure of phosphofructokinase-2 from Escherichia coli in complex with two ATP molecules. Implications for substrate inhibition.
J.Mol.Biol., 383, 2008
3SS4
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Crystal structure of mouse Glutaminase C, phosphate-bound form
Descriptor: Glutaminase C, PHOSPHATE ION
Authors:Ambrosio, A.L.B, Dias, S.M.G, Cerione, R.A.
Deposit date:2011-07-07
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SS5
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Crystal structure of mouse Glutaminase C, L-glutamate-bound form
Descriptor: GLUTAMIC ACID, Glutaminase C
Authors:Ambrosio, A.L.B, Dias, S.M.G, Cerione, R.A.
Deposit date:2011-07-07
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SS3
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BU of 3ss3 by Molmil
Crystal structure of mouse Glutaminase C, ligand-free form
Descriptor: CHLORIDE ION, Glutaminase C
Authors:Ambrosio, A.L.B, Dias, S.M.G, Cerione, R.A.
Deposit date:2011-07-07
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
1S8I
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BU of 1s8i by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, second fatty acid free form
Descriptor: Phospholipase A2 homolog, SULFATE ION
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.609 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
1S8G
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BU of 1s8g by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, fatty acid bound form
Descriptor: GLYCEROL, LAURIC ACID, Phospholipase A2 homolog, ...
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
1S8H
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BU of 1s8h by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, first fatty acid free form
Descriptor: Phospholipase A2 homolog, SULFATE ION
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
4WN5
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BU of 4wn5 by Molmil
Crystal structure of the C-terminal Per-Arnt-Sim (PASb) of human HIF-3alpha9 bound to 18:1-1-monoacylglycerol
Descriptor: HEXAETHYLENE GLYCOL, Hypoxia-inducible factor 3-alpha, MONOVACCENIN, ...
Authors:Fala, A.M, Oliveira, J.F, Dias, S.M, Ambrosio, A.L.
Deposit date:2014-10-10
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Unsaturated fatty acids as high-affinity ligands of the C-terminal Per-ARNT-Sim domain from the Hypoxia-inducible factor 3 alpha.
Sci Rep, 5, 2015
4JJM
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Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A
Descriptor: Peptidyl-prolyl cis-trans isomerase, cyclosporin A
Authors:Campos, B.M, Ambrosio, A.L.B, Souza, T.A.C.B, Barbosa, J.A.R.G, Benedetti, C.E.
Deposit date:2013-03-08
Release date:2013-06-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A redox 2-cys mechanism regulates the catalytic activity of divergent cyclophilins.
Plant Physiol., 162, 2013
4JKT
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BU of 4jkt by Molmil
Crystal structure of mouse Glutaminase C, BPTES-bound form
Descriptor: Glutaminase kidney isoform, mitochondrial, N,N'-[sulfanediylbis(ethane-2,1-diyl-1,3,4-thiadiazole-5,2-diyl)]bis(2-phenylacetamide)
Authors:Fornezari, C, Ferreira, A.P.S, Dias, S.M.G, Ambrosio, A.L.B.
Deposit date:2013-03-11
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Active Glutaminase C Self-assembles into a Supratetrameric Oligomer That Can Be Disrupted by an Allosteric Inhibitor.
J.Biol.Chem., 288, 2013
5F28
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Crystal structure of FAT domain of Focal Adhesion Kinase (FAK) bound to the transcription factor MEF2C
Descriptor: Focal adhesion kinase 1, MEF2C
Authors:Cardoso, A.C, Ambrosio, A.L.B, Dessen, A, Franchini, K.G.
Deposit date:2015-12-01
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:FAK Forms a Complex with MEF2 to Couple Biomechanical Signaling to Transcription in Cardiomyocytes.
Structure, 24, 2016
3FEY
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BU of 3fey by Molmil
Crystal structure of the CBC-importin alpha complex.
Descriptor: Importin subunit alpha-2, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2
Authors:Dias, S.M.G, Ambrosio, A.L.B, Cerione, R.A.
Deposit date:2008-12-01
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular basis for the regulation of the cap-binding complex by the importins.
Nat.Struct.Mol.Biol., 16, 2009
3FEX
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BU of 3fex by Molmil
Crystal structure of the CBC-importin alpha complex.
Descriptor: Importin subunit alpha-2, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2
Authors:Dias, S.M.G, Ambrosio, A.L.B, Cerione, R.A.
Deposit date:2008-12-01
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.549 Å)
Cite:The molecular basis for the regulation of the cap-binding complex by the importins.
Nat.Struct.Mol.Biol., 16, 2009
5U0K
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BU of 5u0k by Molmil
C-terminal ankyrin repeats from human liver-type glutaminase (GAB/LGA)
Descriptor: Glutaminase liver isoform, mitochondrial
Authors:Ferreira, I.M, Pasquali, C.C, Gonzalez, A, Dias, S.M.G, Ambrosio, A.L.B.
Deposit date:2016-11-24
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats.
J. Biol. Chem., 292, 2017
5U0I
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C-terminal ankyrin repeats from human kidney-type glutaminase (KGA) - tetragonal crystal form
Descriptor: CHLORIDE ION, Glutaminase kidney isoform, mitochondrial, ...
Authors:Pasquali, C.C, Gonzalez, A, Dias, S.M.G, Ambrosio, A.L.B.
Deposit date:2016-11-24
Release date:2017-05-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.423 Å)
Cite:The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats.
J. Biol. Chem., 292, 2017
5UQE
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BU of 5uqe by Molmil
Multidomain structure of human kidney-type glutaminase(KGA/GLS)
Descriptor: Glutaminase kidney isoform, mitochondrial, N,N'-[sulfanediylbis(ethane-2,1-diyl-1,3,4-thiadiazole-5,2-diyl)]bis(2-phenylacetamide)
Authors:Pasquali, C.C, Dias, S.M.G, Ambrosio, A.L.B.
Deposit date:2017-02-08
Release date:2017-05-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats.
J. Biol. Chem., 292, 2017
5U0J
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BU of 5u0j by Molmil
C-terminal ankyrin repeats from human kidney-type glutaminase (KGA) - monoclinic crystal form
Descriptor: Glutaminase kidney isoform, mitochondrial, SODIUM ION
Authors:Pasquali, C.C, Gonzalez, A, Dias, S.M.G, Ambrosio, A.L.B.
Deposit date:2016-11-24
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats.
J. Biol. Chem., 292, 2017
8TNV
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BU of 8tnv by Molmil
Hemocyanin Functional Unit CCHB-g of Concholepas concholepas
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Munoz, S, Vallejos-Baccelliere, G, Manubens, A, Salazar, M, Nascimento, A.F.Z, Ambrosio, A.L.B, Becker, M.I, Guixe, V, Castro-Fernandez, V.
Deposit date:2023-08-02
Release date:2024-04-10
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into a functional unit from an immunogenic mollusk hemocyanin.
Structure, 32, 2024
2B4J
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BU of 2b4j by Molmil
Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
Descriptor: GLYCEROL, Integrase (IN), PC4 and SFRS1 interacting protein, ...
Authors:Cherepanov, P, Ambrosio, A.L, Rahman, S, Ellenberger, T, Engelman, A.
Deposit date:2005-09-24
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75
Proc.Natl.Acad.Sci.Usa, 102, 2005
3SUL
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BU of 3sul by Molmil
Crystal structure of cerato-platanin 3 from M. perniciosa (MpCP3)
Descriptor: Cerato-platanin-like protein
Authors:Oliveira, J.F, Barsottini, M.R.O, Zaparoli, G, Machado, L.O, Dias, S.M.G, Pereira, G.A.G, Ambrosio, A.L.B.
Deposit date:2011-07-11
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization.
Mol. Plant Microbe Interact., 26, 2013
3SUJ
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BU of 3suj by Molmil
Crystal structure of cerato-platanin 1 from M. perniciosa (MpCP1)
Descriptor: ACETATE ION, CHLORIDE ION, Cerato-platanin 1, ...
Authors:Oliveira, J.F, Barsottini, M.R.O, Zaparoli, G, Machado, L.O, Dias, S.M.G, Pereira, G.A.G, Ambrosio, A.L.B.
Deposit date:2011-07-11
Release date:2012-07-11
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization.
Mol. Plant Microbe Interact., 26, 2013
3SUK
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BU of 3suk by Molmil
Crystal structure of cerato-platanin 2 from M. perniciosa (MpCP2)
Descriptor: Cerato-platanin-like protein
Authors:Oliveira, J.F, Barsottini, M.R.O, Zaparoli, G, Machado, L.O, Dias, S.M.G, Pereira, G.A.G, Ambrosio, A.L.B.
Deposit date:2011-07-11
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization.
Mol. Plant Microbe Interact., 26, 2013
3ST1
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BU of 3st1 by Molmil
Crystal structure of Necrosis and Ethylene inducing Protein 2 from the causal agent of cocoa's Witches Broom disease
Descriptor: Necrosis-and ethylene-inducing protein, SODIUM ION, ZINC ION
Authors:Oliveira, J.F, Zaparoli, G, Barsottini, M.R.O, Ambrosio, A.L.B, Pereira, G.A.G, Dias, S.M.G.
Deposit date:2011-07-08
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of Necrosis- and Ethylene-Inducing Protein 2 from the Causal Agent of Cacao's Witches' Broom Disease Reveals Key Elements for Its Activity.
Biochemistry, 50, 2011

 

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