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PDB: 88675 results

8OIT
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BU of 8oit by Molmil
39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
4XF5
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BU of 4xf5 by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol.
Descriptor: (2S)-2-aminopropan-1-ol, CHLORIDE ION, Twin-arginine translocation pathway signal
Authors:Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-12-26
Release date:2015-01-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol.
To be published
5LPG
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BU of 5lpg by Molmil
Structure of NUDT15 in complex with 6-thio-GMP
Descriptor: MAGNESIUM ION, Probable 8-oxo-dGTP diphosphatase NUDT15, [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-sulfanyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Authors:Masuyer, G, Carter, M, Rehling, D, Stenmark, P, Helleday, T, Jemth, A.-S, Valerie, N.C.K, Homan, E, Herr, P, Bevc, L, Page, B.D.G, Hagenkort, A.
Deposit date:2016-08-12
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:NUDT15 Hydrolyzes 6-Thio-DeoxyGTP to Mediate the Anticancer Efficacy of 6-Thioguanine.
Cancer Res., 76, 2016
6U7F
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BU of 6u7f by Molmil
HCoV-229E RBD Class IV in complex with human APN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Tomlinson, A.C.A, Li, Z, Rini, J.M.
Deposit date:2019-09-02
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
7NEP
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BU of 7nep by Molmil
Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle sarcomere in the rigor state
Descriptor: Actin, alpha skeletal muscle, Myosin light chain 1/3, ...
Authors:Wang, Z, Grange, M, Wagner, T, Kho, A.L, Gautel, M, Raunser, S.
Deposit date:2021-02-04
Release date:2021-04-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (10.2 Å)
Cite:The molecular basis for sarcomere organization in vertebrate skeletal muscle.
Cell, 184, 2021
6QZP
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BU of 6qzp by Molmil
High-resolution cryo-EM structure of the human 80S ribosome
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA (1740-MER), 28S rRNA (3773-MER), ...
Authors:Natchiar, S.K, Myasnikov, A.G, Kratzat, H, Hazemann, I, Klaholz, B.P.
Deposit date:2019-03-12
Release date:2019-04-24
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Visualization of chemical modifications in the human 80S ribosome structure.
Nature, 551, 2017
7S4K
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BU of 7s4k by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.34 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-09
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
6OBR
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BU of 6obr by Molmil
PP1 Y134A in complex with Microcystin LR
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Microcystin LR, ...
Authors:Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
Deposit date:2019-03-21
Release date:2019-09-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
6U83
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BU of 6u83 by Molmil
OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-ALANINE, Outer membrane associated protein, ...
Authors:Michalska, K, Skarina, T, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-04
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3566 Å)
Cite:OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
6MAT
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BU of 6mat by Molmil
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Rix7 mutant, unknown protein
Authors:Lo, Y.H, Sobhany, M, Hsu, A.L, Ford, B.L, Krahn, J.M, Borgnia, M.J, Stanley, R.E.
Deposit date:2018-08-28
Release date:2019-02-06
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7.
Nat Commun, 10, 2019
7NNS
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BU of 7nns by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound Momelotinib
Descriptor: 1,2-ETHANEDIOL, Activin receptor type I, Momelotinib, ...
Authors:Williams, E, Chen, Z, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2021-02-25
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound Momelotinib
To Be Published
6MBX
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BU of 6mbx by Molmil
CRYSTAL STRUCTURE OF MUSKMELON ALLERGEN CUC M 2
Descriptor: Profilin
Authors:Kapingidza, A.B, Hyduke, N.P, Chruszcz, M.
Deposit date:2018-08-30
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Comparative structural and thermal stability studies of Cuc m 2.0101, Art v 4.0101 and other allergenic profilins.
Mol.Immunol., 114, 2019
6RCA
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BU of 6rca by Molmil
X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 2.2'-anhydrouridine at 1.34 A
Descriptor: 1,2-ETHANEDIOL, 2,2'-Anhydro-(1-beta-D-ribofuranosyl)uracil, CHLORIDE ION, ...
Authors:Prokofev, I.I, Eistrikh-Geller, P.A, Balaev, V.V, Gabdoulkhakov, A.G, Betzel, C, Lashkov, A.A.
Deposit date:2019-04-11
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.345 Å)
Cite:X-Ray Structure and Molecular Dynamics Study of Uridine Phosphorylase from Vibrio cholerae in Complex with 2,2'-Anhydrouridine
Crystallography Reports, 2020
6EMA
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BU of 6ema by Molmil
Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp120 and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, beta-D-ribopyranose, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Mueller, J.M, Heine, A, Klebe, G.
Deposit date:2017-10-01
Release date:2018-10-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conceptional Design of Self-Assembling Bisubstrate-like Inhibitors of Protein Kinase A Resulting in a Boronic Acid Glutamate Linkage
Acs Omega, 2019
7S4J
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BU of 7s4j by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.16 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-09
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.16 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
4XN8
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BU of 4xn8 by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
Descriptor: ALANINE, Aminopeptidase N, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
To Be Published
6MF9
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BU of 6mf9 by Molmil
Crystal structure of CGD4-650 with compound BI2536
Descriptor: 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, ZnKn (C2HC)+Athook+bromo domain protein, Taf250, ...
Authors:Dong, A, Lin, Y.L, Hou, D, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2018-09-10
Release date:2018-10-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.037 Å)
Cite:Crystal structure of CGD4-650 with compound BI2536
to be published
6ERT
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BU of 6ert by Molmil
Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp193 and RKp117
Descriptor: [2-[(4-isoquinolin-5-ylsulfonyl-1,4-diazepan-1-yl)methyl]phenyl]-tris(oxidanyl)boranuide, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor
Authors:Mueller, J.M, Heine, A, Klebe, G.
Deposit date:2017-10-19
Release date:2018-10-31
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conceptional Design of Self-Assembling Bisubstrate-like Inhibitors of Protein Kinase A Resulting in a Boronic Acid Glutamate Linkage
Acs Omega, 2019
7S4H
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BU of 7s4h by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.14 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-08
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
6ENW
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BU of 6enw by Molmil
X-ray structure of Auoxo4-encapsulated horse spleen apoferritin
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2017-10-06
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ferritin nanocages loaded with gold ions induce oxidative stress and apoptosis in MCF-7 human breast cancer cells.
Dalton Trans, 46, 2017
6XQN
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BU of 6xqn by Molmil
Structure of a mitochondrial calcium uniporter holocomplex (MICU1, MICU2, MCU, EMRE) in low Ca2+
Descriptor: CALCIUM ION, Calcium uniporter protein, Calcium uptake protein 1, ...
Authors:Long, S.B, Wang, C, Baradaran, R, Jacewicz, A, Delgado, B.
Deposit date:2020-07-09
Release date:2020-07-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures reveal gatekeeping of the mitochondrial Ca 2+ uniporter by MICU1-MICU2.
Elife, 9, 2020
5IL7
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BU of 5il7 by Molmil
Leucine rich repeat domain of the Chlorobium tepidum Roco protein
Descriptor: Rab family protein
Authors:Gotthardt, K, Wittinghofer, A.
Deposit date:2016-03-04
Release date:2016-03-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural model of the dimeric Parkinson's protein LRRK2 reveals a compact architecture involving distant interdomain contacts.
Proc.Natl.Acad.Sci.USA, 113, 2016
8BM3
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BU of 8bm3 by Molmil
H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate
Descriptor: FARNESYL DIPHOSPHATE, Phosphatidylglycerophosphatase B
Authors:Delbrassine, F, El Ghachi, M, Lambion, A, Herman, R, Kerff, F.
Deposit date:2022-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate
To Be Published
5I7C
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BU of 5i7c by Molmil
Centrosomin-motif 2 (CM2) domain of Drosophila melanogaster Centrosomin (Cnn)
Descriptor: Centrosomin, ZINC ION
Authors:Feng, Z, Cottee, M.A, Johnson, S, Lea, S.M.
Deposit date:2016-02-17
Release date:2017-03-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural Basis for Mitotic Centrosome Assembly in Flies.
Cell, 169, 2017
5ILF
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BU of 5ilf by Molmil
The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and compound 4, a platin(II) compound containing a O, S bidentate ligand
Descriptor: ACETATE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Merlino, A, Ferraro, G.
Deposit date:2016-03-04
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Platinum(ii) O,S complexes as potential metallodrugs against Cisplatin resistance.
Dalton Trans, 45, 2016

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数据于2024-07-31公开中

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