Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 results

7B5E
DownloadVisualize
BU of 7b5e by Molmil
Structure of calcium-bound mTMEM16A(ac)-I551A chloride channel at 4.1 A resolution
Descriptor: Anoctamin-1, CALCIUM ION
Authors:Lam, A.K.M, Rheinberger, J, Paulino, C, Dutzler, R.
Deposit date:2020-12-03
Release date:2021-02-10
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Gating the pore of the calcium-activated chloride channel TMEM16A.
Nat Commun, 12, 2021
6XLE
DownloadVisualize
BU of 6xle by Molmil
Full-length Hsc82 in complex with two Aha1 CTD in the presence of AMP-PNP
Descriptor: ATP-dependent molecular chaperone HSC82, Hsp90 co-chaperone AHA1, MAGNESIUM ION, ...
Authors:Liu, Y.X, Sun, M, Myasnikov, A.G, Elnatan, D, Agard, D.A.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Cryo-EM structures reveal a multistep mechanism of Hsp90 activation by co-chaperone Aha1
To Be Published
6XLF
DownloadVisualize
BU of 6xlf by Molmil
Full-length Hsc82 in complex with Aha1 in the presence of AMP-PNP
Descriptor: ATP-dependent molecular chaperone HSC82, Hsp90 co-chaperone AHA1, MAGNESIUM ION, ...
Authors:Liu, Y.X, Sun, M, Myasnikov, A.G, Elnatan, D, Agard, D.A.
Deposit date:2020-06-28
Release date:2021-06-30
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM structures reveal a multistep mechanism of Hsp90 activation by co-chaperone Aha1
To Be Published
5MEF
DownloadVisualize
BU of 5mef by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304F
Descriptor: Arachidonate 15-lipoxygenase, CHLORIDE ION, FE (III) ION, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.357 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
7B5C
DownloadVisualize
BU of 7b5c by Molmil
Structure of calcium-bound mTMEM16A(ac) chloride channel at 3.7 A resolution
Descriptor: Anoctamin-1, CALCIUM ION
Authors:Lam, A.K.M, Rheinberger, J, Paulino, C, Dutzler, R.
Deposit date:2020-12-03
Release date:2021-02-10
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Gating the pore of the calcium-activated chloride channel TMEM16A.
Nat Commun, 12, 2021
7S7F
DownloadVisualize
BU of 7s7f by Molmil
STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH DOT1L(998-1006) PHOSPHOPEPTIDE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Patskovska, L, Patskovsky, Y, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
Deposit date:2021-09-15
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
8C23
DownloadVisualize
BU of 8c23 by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200T (monoclinic form M200T#m)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Sciuk, A, Ruszkowski, M, Jaskolski, M, Loch, J.I.
Deposit date:2022-12-21
Release date:2023-05-03
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
5JJ4
DownloadVisualize
BU of 5jj4 by Molmil
Crystal Structure of a Variant Human Activation-induced Deoxycytidine Deaminase as an MBP fusion protein
Descriptor: CALCIUM ION, Maltose-binding periplasmic protein,Single-stranded DNA cytosine deaminase, ZINC ION, ...
Authors:Pedersen, L.C, Goodman, M.F, Pham, P, Afif, S.A.
Deposit date:2016-04-22
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.807 Å)
Cite:Structural analysis of the activation-induced deoxycytidine deaminase required in immunoglobulin diversification.
DNA Repair (Amst.), 43, 2016
6XLG
DownloadVisualize
BU of 6xlg by Molmil
Full-length Hsc82 in complex with two Aha1 CTD in the presence of ATPgammaS
Descriptor: ATP-dependent molecular chaperone HSC82, Hsp90 co-chaperone AHA1, MAGNESIUM ION, ...
Authors:Liu, Y.X, Sun, M, Myasnikov, A.G, Elnatan, D, Agard, D.A.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Cryo-EM structures reveal a multistep mechanism of Hsp90 activation by co-chaperone Aha1
To Be Published
7S7E
DownloadVisualize
BU of 7s7e by Molmil
STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH DOT1L(998-1006) PEPTIDE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Patskovska, L, Patskovsky, Y, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
Deposit date:2021-09-15
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
6MWX
DownloadVisualize
BU of 6mwx by Molmil
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-69 Antibody
Descriptor: E1, E2, EEEV-69 antibody heavy chain, ...
Authors:Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
Deposit date:2018-10-30
Release date:2018-12-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6MW9
DownloadVisualize
BU of 6mw9 by Molmil
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-3 antibody
Descriptor: E1, E2, EEEV-3 antibody heavy chain, ...
Authors:Hasan, S.S, Sun, C, Kim, A.S, Watanabe, Y, Chen, C.L, Klose, T, Buda, G, Crispin, M, Diamond, M.S, Klimstra, W.B, Rossmann, M.G.
Deposit date:2018-10-29
Release date:2018-12-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization.
Cell Rep, 25, 2018
6XLH
DownloadVisualize
BU of 6xlh by Molmil
Asymmetric hydrolysis state of Hsc82 in complex with Aha1 bound with ADP and ATPgammaS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent molecular chaperone HSC82, Hsp90 co-chaperone AHA1, ...
Authors:Liu, Y.X, Sun, M, Myasnikov, A.G, Elnatan, D, Agard, D.A.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM structures reveal a multistep mechanism of Hsp90 activation by co-chaperone Aha1
To Be Published
5MF1
DownloadVisualize
BU of 5mf1 by Molmil
Crystal structure of a C-terminally truncated trimeric ectodomain of the Chlamydomonas reinhardtii gamete fusion protein HAP2
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion protein HAP2/GCS1
Authors:Fedry, J, Rey, F.A, Krey, T.
Deposit date:2016-11-17
Release date:2017-03-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The Ancient Gamete Fusogen HAP2 Is a Eukaryotic Class II Fusion Protein.
Cell, 168, 2017
6EYO
DownloadVisualize
BU of 6eyo by Molmil
Structure of extended IgE-Fc in complex with two anti-IgE Fabs
Descriptor: 8D6 Fab heavy chain, 8D6 Fab light chain, Immunoglobulin heavy constant epsilon, ...
Authors:Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
Deposit date:2017-11-13
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
6XVU
DownloadVisualize
BU of 6xvu by Molmil
Bacteriophytochrome response regulator from Deinococcus radiodurans
Descriptor: CALCIUM ION, Response regulator
Authors:Takala, H, Ihalainen, J.A.
Deposit date:2020-01-22
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Comparative analysis of two paradigm bacteriophytochromes reveals opposite functionalities in two-component signaling.
Nat Commun, 12, 2021
5MFD
DownloadVisualize
BU of 5mfd by Molmil
Designed armadillo repeat protein YIIIM''6AII in complex with pD_(KR)5
Descriptor: CALCIUM ION, Capsid decoration protein,pD_(KR)5, YIIIM''6AII
Authors:Hansen, S, Kiefer, J, Madhurantakam, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of designed armadillo repeat proteins binding to peptides fused to globular domains.
Protein Sci., 26, 2017
5JHA
DownloadVisualize
BU of 5jha by Molmil
Structure of Phosphoinositide 3-kinase gamma (PI3K) bound to the potent inhibitor PIKin2
Descriptor: Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION, [1-{4-[6-amino-4-(trifluoromethyl)pyridin-3-yl]-6-(morpholin-4-yl)pyrimidin-2-yl}-3-(chloromethyl)azetidin-3-yl]methanol
Authors:Burke, J.E, Inglis, A.J, Williams, R.L.
Deposit date:2016-04-20
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Deconvolution of Buparlisib's mechanism of action defines specific PI3K and tubulin inhibitors for therapeutic intervention.
Nat Commun, 8, 2017
5MDK
DownloadVisualize
BU of 5mdk by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form (oxidized state - state 3)
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6MHB
DownloadVisualize
BU of 6mhb by Molmil
Glutathione S-Transferase Omega 1 bound to covalent inhibitor 18
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glutathione S-transferase omega-1, N-[4-(4-chlorophenyl)-1,3-thiazol-2-yl]propanamide
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2018-09-17
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure-Based Design of N-(5-Phenylthiazol-2-yl)acrylamides as Novel and Potent Glutathione S-Transferase Omega 1 Inhibitors.
J. Med. Chem., 62, 2019
5JN9
DownloadVisualize
BU of 5jn9 by Molmil
Crystal structure for the complex of human carbonic anhydrase IV and ethoxyzolamide
Descriptor: 6-ethoxy-1,3-benzothiazole-2-sulfonamide, ACETATE ION, Carbonic anhydrase 4, ...
Authors:Chen, Z, Waheed, A, Di Cera, E, Sly, W.S.
Deposit date:2016-04-29
Release date:2017-05-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Intrinsic thermodynamics of high affinity inhibitor binding to recombinant human carbonic anhydrase IV.
Eur. Biophys. J., 47, 2018
6RGK
DownloadVisualize
BU of 6rgk by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-055
Descriptor: 3-[5-[(4~{a}~{R},8~{a}~{S})-3-cycloheptyl-4-oxidanylidene-4~{a},5,6,7,8,8~{a}-hexahydrophthalazin-1-yl]-2-methoxy-phenyl]-~{N}-butyl-prop-2-ynamide, FORMIC ACID, GLYCEROL, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2019-04-16
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Alkynamide phthalazinones as a new class of TbrPDEB1 inhibitors (Part 2).
Bioorg.Med.Chem., 27, 2019
7RZJ
DownloadVisualize
BU of 7rzj by Molmil
CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PHOSPHOPEPTIDE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Patskovsky, Y, Patskovska, L, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
Deposit date:2021-08-27
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
5JNP
DownloadVisualize
BU of 5jnp by Molmil
Crystal structure of a rice (Oryza Sativa) cellulose synthase plant conserved region (P-CR)
Descriptor: CITRATE ANION, GLYCEROL, PHOSPHATE ION, ...
Authors:Rushton, P.S, Olek, A.T, Makowski, L, Badger, J, Steussy, C.N, Carpita, N.C, Stauffacher, C.V.
Deposit date:2016-04-30
Release date:2016-12-28
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Rice Cellulose SynthaseA8 Plant-Conserved Region Is a Coiled-Coil at the Catalytic Core Entrance.
Plant Physiol., 173, 2017
8SJK
DownloadVisualize
BU of 8sjk by Molmil
Pembrolizumab Caffeine crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY HEAVY CHAIN, ANTIBODY LIGHT CHAIN, ...
Authors:Larpent, P, Codan, L, Bothe, J.R, Stueber, D, Reichert, P, Fischmann, T, Su, Y, Pabit, S, Gupta, S, Iuzzolino, L, Cote, A.
Deposit date:2023-04-18
Release date:2024-04-24
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Small-Angle X-ray Scattering as a Powerful Tool for Phase and Crystallinity Assessment of Monoclonal Antibody Crystallites in Support of Batch Crystallization.
Mol Pharm., 2024

223166

数据于2024-07-31公开中

PDB statisticsPDBj update infoContact PDBjnumon