Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89472 件

5EA0
DownloadVisualize
BU of 5ea0 by Molmil
Structure of the antibody 7968 with human complement factor H-derived peptide
分子名称: Complement factor H-related protein 2, Heavy chain of antibody 7968 Fab fragment, Light chain of antibody 7968 Fab fragment
著者Bushey, R.T, Moody, M.A, Nicely, N.I, Alam, S.M, Haynes, B.F, Winkler, M.T, Gottlin, E.B, Campa, M.J, Liao, H.-X, Patz Jr, E.F.
登録日2015-10-15
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Therapeutic Antibody for Cancer, Derived from Single Human B Cells.
Cell Rep, 15, 2016
6W5L
DownloadVisualize
BU of 6w5l by Molmil
2.1 A resolution structure of Norovirus 3CL protease in complex with inhibitor 7g
分子名称: (2~{S})-~{N}-[(1~{R})-1-[bis($l^{1}-oxidanyl)-methoxy-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[[2-(3-chlorophenyl)-2-methyl-propoxy]-oxidanylidene-methyl]amino]-4-methyl-pentanamide, 3C-LIKE PROTEASE
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
登録日2020-03-13
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
6FM3
DownloadVisualize
BU of 6fm3 by Molmil
Deoxyguanylosuccinate synthase (DgsS) structure with ADP at 1.9 Angstrom resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylosuccinate synthetase, CHLORIDE ION
著者Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
登録日2018-01-30
公開日2019-06-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP0, dGMP, Magnesium at 2.3 Angstrom resolution
To Be Published
3IVE
DownloadVisualize
BU of 3ive by Molmil
Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, CHLORIDE ION, FE (III) ION, ...
著者Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-08-31
公開日2009-09-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine
To be Published
6NBH
DownloadVisualize
BU of 6nbh by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
分子名称: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
登録日2018-12-07
公開日2019-04-17
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
5HEI
DownloadVisualize
BU of 5hei by Molmil
Structure of B. megaterium NfrA2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAVIN MONONUCLEOTIDE, NfrA2, ...
著者Vigouroux, A, Morera, S.
登録日2016-01-06
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Functional and structural characterization of two Bacillus megaterium nitroreductases biotransforming the herbicide mesotrione.
Biochem.J., 473, 2016
6D97
DownloadVisualize
BU of 6d97 by Molmil
Structure of aldehyde dehydrogenase 12 (ALDH12) from Zea mays
分子名称: Aldehyde dehydrogenase 12, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tanner, J.J, Korasick, D.A, Kopecny, D.
登録日2018-04-27
公開日2019-01-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Biochemical Characterization of Aldehyde Dehydrogenase 12, the Last Enzyme of Proline Catabolism in Plants.
J. Mol. Biol., 431, 2019
6G41
DownloadVisualize
BU of 6g41 by Molmil
Crystal structure of SeMet-labeled mavirus penton protein
分子名称: Minor capsid protein
著者Born, D, Reuter, L, Meinhart, A, Reinstein, J.
登録日2018-03-26
公開日2018-07-04
最終更新日2018-07-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Capsid protein structure, self-assembly, and processing reveal morphogenesis of the marine virophage mavirus.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4RYF
DownloadVisualize
BU of 4ryf by Molmil
ClpP1/2 heterocomplex from Listeria monocytogenes
分子名称: ATP-dependent Clp protease proteolytic subunit, MALONATE ION, SODIUM ION
著者Dahmen, M, Vielberg, M.-T, Groll, M, Sieber, S.A.
登録日2014-12-15
公開日2014-12-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and mechanism of the caseinolytic protease ClpP1/2 heterocomplex from Listeria monocytogenes.
Angew.Chem.Int.Ed.Engl., 54, 2015
5DWY
DownloadVisualize
BU of 5dwy by Molmil
Crystal structure of a substrate-free glutamate transporter homologue GltTk
分子名称: DI(HYDROXYETHYL)ETHER, Proton/glutamate symporter, SDF family, ...
著者Guskov, A, Slotboom, D.J.
登録日2015-09-23
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Coupled binding mechanism of three sodium ions and aspartate in the glutamate transporter homologue GltTk.
Nat Commun, 7, 2016
3EVQ
DownloadVisualize
BU of 3evq by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
登録日2008-10-13
公開日2008-11-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of D+PHS L25E at cryogenic temperature
To be Published
5UOG
DownloadVisualize
BU of 5uog by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc04462 (SmGhrB) from Sinorhizobium meliloti in apo form
分子名称: NADPH-dependent glyoxylate/hydroxypyruvate reductase, SULFATE ION
著者Shabalin, I.G, Handing, K.B, Gasiorowska, O.A, Cooper, D.R, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2017-01-31
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
6WBV
DownloadVisualize
BU of 6wbv by Molmil
Structure of human ferroportin bound to hepcidin and cobalt in lipid nanodisc
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, COBALT (II) ION, Fab45D8 Heavy Chain, ...
著者Billesboelle, C.B, Azumaya, C.M, Gonen, S, Powers, A, Kretsch, R.C, Schneider, S, Arvedson, T, Dror, R.O, Cheng, Y, Manglik, A.
登録日2020-03-27
公開日2020-09-09
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structure of hepcidin-bound ferroportin reveals iron homeostatic mechanisms.
Nature, 586, 2020
7Z4Z
DownloadVisualize
BU of 7z4z by Molmil
Human NEXT dimer - focused reconstruction of the dimerization module
分子名称: Exosome RNA helicase MTR4, Zinc finger CCHC domain-containing protein 8
著者Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E.
登録日2022-03-06
公開日2022-06-22
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome.
Mol.Cell, 82, 2022
6NF3
DownloadVisualize
BU of 6nf3 by Molmil
Structure of the Monoclinic-3 (Monocln-3) Crystal Form of Human Apolipoprotein C1
分子名称: Apolipoprotein C-I
著者McPherson, A, Larson, S.B.
登録日2018-12-18
公開日2018-12-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献The structure of human apolipoprotein C-1 in four different crystal forms.
J. Lipid Res., 60, 2019
7Z5M
DownloadVisualize
BU of 7z5m by Molmil
Crystal structure of YTHDF2 with compound YLI_DC1_008
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Nai, F, Li, Y, Caflisch, A.
登録日2022-03-09
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment Ligands of the m 6 A-RNA Reader YTHDF2.
Acs Med.Chem.Lett., 13, 2022
6FSA
DownloadVisualize
BU of 6fsa by Molmil
Beta-Cardiac myosin post-rigor
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FORMIC ACID, ...
著者Robert-Paganin, J, Auguin, D, Houdusse, A.
登録日2018-02-19
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Hypertrophic cardiomyopathy disease results from disparate impairments of cardiac myosin function and auto-inhibition.
Nat Commun, 9, 2018
5E2E
DownloadVisualize
BU of 5e2e by Molmil
Crystal Structure of Beta-lactamase Precursor BlaA from Yersinia enterocolitica
分子名称: Beta-lactamase
著者Kim, Y, Joachimiak, G, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-10-01
公開日2015-10-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Beta-lactamase Precursor BlaA from Yersinia enterocolitica
To Be Published
7Z4Y
DownloadVisualize
BU of 7z4y by Molmil
Human NEXT dimer - overall reconstruction of the core complex
分子名称: Exosome RNA helicase MTR4, Zinc finger CCHC domain-containing protein 8
著者Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E.
登録日2022-03-06
公開日2022-06-22
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome.
Mol.Cell, 82, 2022
7ZBQ
DownloadVisualize
BU of 7zbq by Molmil
Structure of the ADP-ribosyltransferase TccC3HVR from Photorhabdus Luminescens
分子名称: TccC3
著者Lindemann, F, Belyy, A, Friedrich, D, Schmieder, P, Bardiaux, B, Roderer, D, Funk, J, Protze, J, Bieling, P, Oschkinat, H, Raunser, S.
登録日2022-03-24
公開日2022-06-29
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin.
Nat Commun, 13, 2022
6NBB
DownloadVisualize
BU of 6nbb by Molmil
Horse liver alcohol dehydrogenase determined using single-particle cryo-EM at 200 keV
分子名称: Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Herzik Jr, M.A, Wu, M, Lander, G.C.
登録日2018-12-06
公開日2019-03-13
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献High-resolution structure determination of sub-100 kDa complexes using conventional cryo-EM.
Nat Commun, 10, 2019
5AAY
DownloadVisualize
BU of 5aay by Molmil
TBK1 recruitment to cytosol-invading Salmonella induces anti- bacterial autophagy
分子名称: NF-KAPPA-B ESSENTIAL MODULATOR, ZINC ION
著者Thurston, T.l, Allen, M.D, Ravenhill, B, Karpiyevitch, M, Bloor, S, Kaul, A, Matthews, S, Komander, D, Holden, D, Bycroft, M, Randow, F.
登録日2015-07-31
公開日2016-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Recruitment of Tbk1 to Cytosol-Invading Salmonella Induces Wipi2-Dependent Antibacterial Autophagy.
Embo J., 35, 2016
3FSK
DownloadVisualize
BU of 3fsk by Molmil
P38 kinase crystal structure in complex with RO6257
分子名称: 3-(2-chlorophenyl)-7-[(trans-4-hydroxycyclohexyl)amino]-3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one, Mitogen-activated protein kinase 14
著者Kuglstatter, A, Bertrand, J, Takahara, P, Villasenor, A.
登録日2009-01-09
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mapping Binding Pocket Volume: Potential Applications towards Ligand Design and Selectivity
To be Published
5G61
DownloadVisualize
BU of 5g61 by Molmil
S.pneumoniae ABC-transporter substrate binding protein FusA in complex with fructo-nystose
分子名称: ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN, CALCIUM ION, ...
著者Culurgioni, S, Harris, G, Singh, A.K, King, S.J, Walsh, M.A.
登録日2016-06-10
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae.
Structure, 25, 2017
4ONF
DownloadVisualize
BU of 4onf by Molmil
Fab fragment of 3D6 in complex with amyloid beta 1-7
分子名称: 3D6 FAB ANTIBODY HEAVY CHAIN, 3D6 FAB ANTIBODY LIGHT CHAIN, Amyloid beta A4 protein
著者Feinberg, H, Saldanha, J.W, Diep, L, Goel, A, Widom, A, Veldman, G.M, Weis, W.I, Schenk, D, Basi, G.S.
登録日2014-01-28
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure reveals conservation of amyloid-beta conformation recognized by 3D6 following humanization to bapineuzumab.
Alzheimers Res Ther, 6, 2014

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon