Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2LUM
DownloadVisualize
BU of 2lum by Molmil
Three-State Ensemble obtained from eNOEs of the Third Immunoglobulin Binding Domain of Protein G (GB3)
Descriptor: Immunoglobulin G-binding protein G
Authors:Vogeli, B, Kazemi, S, Guntert, P, Riek, R.
Deposit date:2012-06-18
Release date:2012-08-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Spatial elucidation of motion in proteins by ensemble-based structure calculation using exact NOEs.
Nat.Struct.Mol.Biol., 19, 2012
8GBD
DownloadVisualize
BU of 8gbd by Molmil
Homo sapiens Zalpha mutant - P193A
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Langeberg, C.J, Vogeli, B, Nichols, P.J, Henen, M, Vicens, Q.
Deposit date:2023-02-25
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Differential Structural Features of Two Mutant ADAR1p150 Z alpha Domains Associated with Aicardi-Goutieres Syndrome.
J.Mol.Biol., 435, 2023
8GBC
DownloadVisualize
BU of 8gbc by Molmil
Homo sapiens Zalpha mutant - N173S
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Langeberg, C.J, Nichols, P.J, Henen, M, Vicens, Q, Vogeli, B.
Deposit date:2023-02-25
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Differential Structural Features of Two Mutant ADAR1p150 Z alpha Domains Associated with Aicardi-Goutieres Syndrome.
J.Mol.Biol., 435, 2023
7SUQ
DownloadVisualize
BU of 7suq by Molmil
Two-state solution NMR structure of Pin1 bound to peptide FFpSPR
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Born, A, Vogeli, B.
Deposit date:2021-11-17
Release date:2022-08-17
Method:SOLUTION NMR
Cite:Ligand-specific conformational change drives interdomain allostery in Pin1.
Nat Commun, 13, 2022
7SUR
DownloadVisualize
BU of 7sur by Molmil
Two-state solution NMR structure of Pin1 bound to peptide pCDC25c
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Born, A, Vogeli, B.
Deposit date:2021-11-17
Release date:2022-08-17
Method:SOLUTION NMR
Cite:Ligand-specific conformational change drives interdomain allostery in Pin1.
Nat Commun, 13, 2022
6BY5
DownloadVisualize
BU of 6by5 by Molmil
Two-State 14-mer UUCG Tetraloop calculated from Exact NOEs (State one: Conformers 1-5, State Two: Conformers 6-10)
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nichols, P.J, Henen, M.A, Born, A, Strotz, D, Guntert, P, Vogeli, B.
Deposit date:2017-12-19
Release date:2018-06-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraints.
Commun Biol, 1, 2018
6BY4
DownloadVisualize
BU of 6by4 by Molmil
Single-State 14-mer UUCG Tetraloop calculated from Exact NOEs
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nichols, P.J, Henen, M.A, Born, A, Strotz, D, Guntert, P, Vogeli, B.
Deposit date:2017-12-19
Release date:2018-06-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraints.
Commun Biol, 1, 2018
7SA5
DownloadVisualize
BU of 7sa5 by Molmil
Two-state solution NMR structure of Apo Pin1
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Born, A, Vogeli, B.
Deposit date:2021-09-22
Release date:2021-10-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Reconstruction of Coupled Intra- and Interdomain Protein Motion from Nuclear and Electron Magnetic Resonance.
J.Am.Chem.Soc., 143, 2021
6SVE
DownloadVisualize
BU of 6sve by Molmil
Protein allostery of the WW domain at atomic resolution: pCdc25C bound structure
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
Deposit date:2019-09-18
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SVC
DownloadVisualize
BU of 6svc by Molmil
Protein allostery of the WW domain at atomic resolution: apo structure
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
Deposit date:2019-09-18
Release date:2020-09-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SVH
DownloadVisualize
BU of 6svh by Molmil
Protein allostery of the WW domain at atomic resolution: FFpSPR bound structure
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
Deposit date:2019-09-18
Release date:2020-09-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020
6HR8
DownloadVisualize
BU of 6hr8 by Molmil
HMG-CoA reductase from Methanothermococcus thermolithotrophicus in complex with NADPH at 2.9 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, HMG-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Wagner, T, Voegeli, B, Erb, T.J, Shima, S.
Deposit date:2018-09-26
Release date:2019-02-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of archaeal HMG-CoA reductase: insights into structural changes of the C-terminal helix of the class-I enzyme.
Febs Lett., 593, 2019
6HR7
DownloadVisualize
BU of 6hr7 by Molmil
HMG-CoA reductase from Methanothermococcus thermolithotrophicus apo form at 2.4 A resolution
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
Authors:Wagner, T, Voegeli, B, Erb, T.J, Shima, S.
Deposit date:2018-09-26
Release date:2019-02-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of archaeal HMG-CoA reductase: insights into structural changes of the C-terminal helix of the class-I enzyme.
Febs Lett., 593, 2019
6EP8
DownloadVisualize
BU of 6ep8 by Molmil
InhA Y158F mutant in complex with NADH from Mycobacterium tuberculosis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Enoyl-[acyl-carrier-protein] reductase [NADH], GLYCEROL, ...
Authors:Wagner, T, Voegeli, B, Rosenthal, R.G, Stoffel, G, Shima, S, Kiefer, P, Cortina, N, Erb, T.J.
Deposit date:2017-10-11
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:InhA, the enoyl-thioester reductase fromMycobacterium tuberculosisforms a covalent adduct during catalysis.
J. Biol. Chem., 293, 2018
6ESQ
DownloadVisualize
BU of 6esq by Molmil
Structure of the acetoacetyl-CoA thiolase/HMG-CoA synthase complex from Methanothermococcus thermolithotrophicus soaked with acetyl-CoA
Descriptor: CHLORIDE ION, COENZYME A, HydroxyMethylGlutaryl-CoA synthase, ...
Authors:Voegeli, B, Engilberge, S, Girard, E, Riobe, F, Maury, O, Erb, J.T, Shima, S, Wagner, T.
Deposit date:2017-10-24
Release date:2018-03-14
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ET9
DownloadVisualize
BU of 6et9 by Molmil
Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyl-CoA acetyltransferase thiolase, CHLORIDE ION, ...
Authors:Engilberge, S, Voegeli, B, Girard, E, Riobe, F, Maury, O, Erb, T.J, Shima, S, Wagner, T.
Deposit date:2017-10-25
Release date:2018-03-14
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4WAS
DownloadVisualize
BU of 4was by Molmil
STRUCTURE OF THE ETR1P/NADP/CROTONYL-COA COMPLEX
Descriptor: CROTONYL COENZYME A, Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, ...
Authors:Quade, N, Voegeli, B, Rosenthal, R, Capitani, G, Erb, T.J.
Deposit date:2014-08-31
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The use of ene adducts to study and engineer enoyl-thioester reductases.
Nat.Chem.Biol., 11, 2015
2GTV
DownloadVisualize
BU of 2gtv by Molmil
NMR structure of monomeric chorismate mutase from Methanococcus jannaschii
Descriptor: 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, chorismate mutase
Authors:Vogeli, B.R.
Deposit date:2006-04-28
Release date:2006-10-31
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure and dynamics of a molten globular enzyme.
Nat.Struct.Mol.Biol., 14, 2007
4W99
DownloadVisualize
BU of 4w99 by Molmil
Apo-structure of the Y79F,W322E-double mutant of Etr1p
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial, ...
Authors:Quade, N, Voegeli, B, Rosenthal, R, Erb, T.J.
Deposit date:2014-08-27
Release date:2015-03-18
Last modified:2015-05-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The use of ene adducts to study and engineer enoyl-thioester reductases.
Nat.Chem.Biol., 11, 2015
6NA3
DownloadVisualize
BU of 6na3 by Molmil
Crystal Structure of Apo-form of ECR
Descriptor: CHLORIDE ION, Putative crotonyl-CoA reductase, Pyrrolidine
Authors:DeMirci, H.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2022-05-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases
Acs Cent.Sci., 2022
6NA6
DownloadVisualize
BU of 6na6 by Molmil
Serial Femtosecond X-ray Crystallography Structure of ECR in complex with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative crotonyl-CoA reductase
Authors:DeMirci, H.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2022-05-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases
Acs Cent.Sci., 2022
5LB9
DownloadVisualize
BU of 5lb9 by Molmil
Structure of the T175V Etr1p mutant in the monoclinic form P21
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial, ...
Authors:Wagner, T, Rosenthal, R.G, Voegeli, B, Shima, S, Erb, T.J.
Deposit date:2016-06-15
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A conserved threonine prevents self-intoxication of enoyl-thioester reductases.
Nat. Chem. Biol., 13, 2017
5LBX
DownloadVisualize
BU of 5lbx by Molmil
Structure of the T175V Etr1p mutant in the trigonal form P312 in complex with NADP and crotonyl-CoA
Descriptor: CHLORIDE ION, CROTONYL COENZYME A, Enoyl-[acyl-carrier-protein] reductase [NADPH, ...
Authors:Wagner, T, Rosenthal, R.G, Voegeli, B, Shima, S, Erb, T.J.
Deposit date:2016-06-17
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A conserved threonine prevents self-intoxication of enoyl-thioester reductases.
Nat. Chem. Biol., 13, 2017
7UHC
DownloadVisualize
BU of 7uhc by Molmil
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Multivalent miniprotein inhibitor AHB2-2GS-SB175, ...
Authors:Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2022-03-26
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice.
Sci Transl Med, 14, 2022
7UHB
DownloadVisualize
BU of 7uhb by Molmil
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Multivalent miniprotein inhibitor AHB2-2GS-SB175, Spike glycoprotein
Authors:Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2022-03-26
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice.
Sci Transl Med, 14, 2022

 

12>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon