Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8T7F
DownloadVisualize
BU of 8t7f by Molmil
Structure of the S1 variant of Fab F1
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, S1 variant of Fab F1 heavy chain, S1 variant of Fab F1 light chain, ...
Authors:Singer, A.U, Bruce, H.A, Enderle, L, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
Deposit date:2023-06-20
Release date:2023-11-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T7G
DownloadVisualize
BU of 8t7g by Molmil
Structure of the CK variant of Fab F1 (FabC-F1)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CK variant of Fab F1 heavy chain, ...
Authors:Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
Deposit date:2023-06-20
Release date:2023-11-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T7I
DownloadVisualize
BU of 8t7i by Molmil
Structure of the S1CE variant of Fab F1 (FabS1CE-F1)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, S1CE variant of Fab F1 heavy chain, ...
Authors:Singer, A.U, Bruce, H.A, Enderle, L, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
Deposit date:2023-06-20
Release date:2023-11-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8TRS
DownloadVisualize
BU of 8trs by Molmil
Structure of the EphA2 CRD bound to FabS1CE_C1, trigonal form
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
Deposit date:2023-08-10
Release date:2023-11-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
2F8K
DownloadVisualize
BU of 2f8k by Molmil
Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
Descriptor: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
Authors:Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
Deposit date:2005-12-02
Release date:2006-01-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
2HEN
DownloadVisualize
BU of 2hen by Molmil
Crystal Structure of the EphB2 Receptor Kinase domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ephrin type-B receptor 2, MAGNESIUM ION
Authors:Wybenga-Groot, L.E, Sicheri, F, Pawson, T.
Deposit date:2006-06-21
Release date:2007-02-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases
EMBO J., 25, 2006
2HEL
DownloadVisualize
BU of 2hel by Molmil
Crystal structure of a mutant EphA4 kinase domain (Y742A)
Descriptor: Eph receptor A4
Authors:Wybenga-Groot, L.E, Sicheri, F, Pawson, T.
Deposit date:2006-06-21
Release date:2007-02-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases.
EMBO J., 25, 2006
2HJN
DownloadVisualize
BU of 2hjn by Molmil
Structural and functional analysis of Saccharomyces cerevisiae Mob1
Descriptor: Maintenance of ploidy protein MOB1, SULFATE ION, ZINC ION
Authors:Mrkobrada, S, Ceccarelli, D.F, Sicheri, F.
Deposit date:2006-06-30
Release date:2006-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Analysis of Saccharomyces cerevisiae Mob1.
J.Mol.Biol., 362, 2006
4WO5
DownloadVisualize
BU of 4wo5 by Molmil
Crystal structure of a BRAF kinase domain monomer
Descriptor: N-{3-[(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]-2,4-difluorophenyl}propane-1-sulfonamide, Serine/threonine-protein kinase B-raf
Authors:Critton, D.A.
Deposit date:2014-10-15
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal structure of a BRAF kinase domain monomer explains basis for allosteric regulation.
Nat.Struct.Mol.Biol., 22, 2015
5E95
DownloadVisualize
BU of 5e95 by Molmil
Crystal Structure of Mb(NS1)/H-Ras Complex
Descriptor: GTPase HRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Eguchi, R.R, Sha, F, Gupta, A, Koide, A, Koide, S.
Deposit date:2015-10-14
Release date:2016-11-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Inhibition of RAS function through targeting an allosteric regulatory site.
Nat. Chem. Biol., 13, 2017
3N3K
DownloadVisualize
BU of 3n3k by Molmil
The catalytic domain of USP8 in complex with a USP8 specific inhibitor
Descriptor: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 8, ZINC ION
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Allali-Hassani, A, Lam, R, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
Deposit date:2010-05-20
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
2P64
DownloadVisualize
BU of 2p64 by Molmil
D domain of b-TrCP
Descriptor: CADMIUM ION, F-box/WD repeat protein 1A
Authors:Neculai, D, Orlicky, S, Ceccarelli, D.
Deposit date:2007-03-16
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination.
Cell(Cambridge,Mass.), 129, 2007
2P63
DownloadVisualize
BU of 2p63 by Molmil
Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination
Descriptor: Cell division control protein 4
Authors:Orlicky, S, Neculai, D, Ceccarelli, D.
Deposit date:2007-03-16
Release date:2007-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination.
Cell(Cambridge,Mass.), 129, 2007
5CW6
DownloadVisualize
BU of 5cw6 by Molmil
Structure of metal dependent enzyme DrBRCC36
Descriptor: DrBRCC36, ZINC ION
Authors:Zeqiraj, E.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.193 Å)
Cite:Higher-Order Assembly of BRCC36-KIAA0157 Is Required for DUB Activity and Biological Function.
Mol.Cell, 59, 2015
5CW4
DownloadVisualize
BU of 5cw4 by Molmil
Structure of CfBRCC36-CfKIAA0157 complex (Selenium Edge)
Descriptor: BRCA1/BRCA2-containing complex subunit 3, GLYCEROL, Protein FAM175B, ...
Authors:Zeqiraj, E.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.543 Å)
Cite:Higher-Order Assembly of BRCC36-KIAA0157 Is Required for DUB Activity and Biological Function.
Mol.Cell, 59, 2015
5CW5
DownloadVisualize
BU of 5cw5 by Molmil
Structure of CfBRCC36-CfKIAA0157 complex (QSQ mutant)
Descriptor: BRCA1/BRCA2-containing complex subunit 3, Protein FAM175B
Authors:Zeqiraj, E.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.736 Å)
Cite:Higher-Order Assembly of BRCC36-KIAA0157 Is Required for DUB Activity and Biological Function.
Mol.Cell, 59, 2015
5CW3
DownloadVisualize
BU of 5cw3 by Molmil
Structure of CfBRCC36-CfKIAA0157 complex (Zn Edge)
Descriptor: BRCA1/BRCA2-containing complex subunit 3, Protein FAM175B, ZINC ION
Authors:Zeqiraj, E.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Higher-Order Assembly of BRCC36-KIAA0157 Is Required for DUB Activity and Biological Function.
Mol.Cell, 59, 2015
3MTN
DownloadVisualize
BU of 3mtn by Molmil
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
Descriptor: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ...
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2010-04-30
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
1K3E
DownloadVisualize
BU of 1k3e by Molmil
Type III secretion chaperone CesT
Descriptor: CesT
Authors:Luo, Y, Bertero, M, Frey, E.A, Pfuetzner, R.A, Wenk, M.R, Creagh, L, Marcus, S.L, Lim, D, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2001-10-02
Release date:2001-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical characterization of the type III secretion chaperones CesT and SigE.
Nat.Struct.Biol., 8, 2001
1K3S
DownloadVisualize
BU of 1k3s by Molmil
Type III Secretion Chaperone SigE
Descriptor: PHOSPHATE ION, SigE
Authors:Bertero, M.G, Luo, Y, Frey, E.A, Pfuetzner, R.A, Wenk, M.R, Creagh, L, Marcus, S.L, Lim, D, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2001-10-03
Release date:2001-11-28
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biochemical characterization of the type III secretion chaperones CesT and SigE.
Nat.Struct.Biol., 8, 2001
3ENC
DownloadVisualize
BU of 3enc by Molmil
Crystal structure of Pyrococcus furiosus PCC1 dimer
Descriptor: protein PCC1
Authors:Neculai, D.
Deposit date:2008-09-25
Release date:2008-10-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6304 Å)
Cite:Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine.
Mol.Cell, 32, 2008
3EN9
DownloadVisualize
BU of 3en9 by Molmil
Structure of the Methanococcus jannaschii KAE1-BUD32 fusion protein
Descriptor: HEXATANTALUM DODECABROMIDE, MAGNESIUM ION, O-sialoglycoprotein endopeptidase/protein kinase
Authors:Neculai, D.
Deposit date:2008-09-25
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine.
Mol.Cell, 32, 2008
3ENO
DownloadVisualize
BU of 3eno by Molmil
Crystal structure of Pyrococcus furiosus Pcc1 in complex with Thermoplasma acidophilum Kae1
Descriptor: MAGNESIUM ION, Putative O-sialoglycoprotein endopeptidase, uncharacterized protein PF2011
Authors:Neculai, D.
Deposit date:2008-09-25
Release date:2008-10-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.0201 Å)
Cite:Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine.
Mol.Cell, 32, 2008
3ENH
DownloadVisualize
BU of 3enh by Molmil
Crystal structure of Cgi121/Bud32/Kae1 complex
Descriptor: HEXATANTALUM DODECABROMIDE, Putative O-sialoglycoprotein endopeptidase, Uncharacterized protein MJ0187
Authors:Neculai, D.
Deposit date:2008-09-25
Release date:2008-10-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Atomic Structure of the KEOPS Complex: An Ancient Protein Kinase-Containing Molecular Machine
Mol.Cell, 32, 2008
3I3T
DownloadVisualize
BU of 3i3t by Molmil
Crystal structure of covalent ubiquitin-USP21 complex
Descriptor: ETHANAMINE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 21, ...
Authors:Neculai, D, Avvakumov, G.V, Walker, J.R, Xue, S, Butler-Cole, C, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2009-06-30
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon