4PVQ
| Crystal structure of sulfate-bound human l-asparaginase protein | Descriptor: | IODIDE ION, Isoaspartyl peptidase/L-asparaginase, SODIUM ION, ... | Authors: | Nomme, J, Lavie, A. | Deposit date: | 2014-03-18 | Release date: | 2014-03-26 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.13 Å) | Cite: | Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis. Biochemistry, 51, 2012
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4PVP
| Crystal structure of malonate-bound human L-asparaginase protein | Descriptor: | Isoaspartyl peptidase/L-asparaginase, MALONATE ION, SODIUM ION | Authors: | Nomme, J, Lavie, A. | Deposit date: | 2014-03-18 | Release date: | 2014-03-26 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis. Biochemistry, 51, 2012
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4TMK
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3HP1
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3KFX
| Human dCK complex with 5-Me dC and ADP | Descriptor: | 5-METHYL-2'-DEOXYCYTIDINE, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase | Authors: | Hazra, S, Lavie, A. | Deposit date: | 2009-10-28 | Release date: | 2010-09-15 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.96 Å) | Cite: | Structural and kinetic characterization of human deoxycytidine kinase variants able to phosphorylate 5-substituted deoxycytidine and thymidine analogues . Biochemistry, 49, 2010
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3MJR
| Human dCK complex with Acyclic Nucleoside | Descriptor: | 9-HYROXYETHOXYMETHYLGUANINE, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Hazra, S, Lavie, A. | Deposit date: | 2010-04-13 | Release date: | 2010-07-28 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | The Sugar Ring of the Nucleoside Is Required for Productive Substrate Positioning in the Active Site of Human Deoxycytidine Kinase (dCK): Implications for the Development of dCK-Activated Acyclic Guanine Analogues. J.Med.Chem., 53, 2010
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3QEO
| S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP | Descriptor: | Deoxycytidine kinase, L-deoxythymidine, URIDINE-5'-DIPHOSPHATE | Authors: | Lavie, A, Hazra, S. | Deposit date: | 2011-01-20 | Release date: | 2011-03-16 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.897 Å) | Cite: | Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release. Biochemistry, 50, 2011
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3QEN
| S74E dCK in complex with 5-bromodeoxycytidine and UDP | Descriptor: | 5-bromo-2'-deoxycytidine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Lavie, A, Hazra, S. | Deposit date: | 2011-01-20 | Release date: | 2011-03-16 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.997 Å) | Cite: | Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release. Biochemistry, 50, 2011
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3QEJ
| S74E-dCK mutant in complex with UDP | Descriptor: | Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Hazra, S, Lavie, A. | Deposit date: | 2011-01-20 | Release date: | 2011-03-16 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.49 Å) | Cite: | Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release. Biochemistry, 50, 2011
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1NCL
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2CKO
| Crystal structure of Human Choline Kinase alpha 2 | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHOLINE KINASE ALPHA | Authors: | Malito, E, Lavie, A. | Deposit date: | 2006-04-20 | Release date: | 2006-10-04 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Elucidation of Human Choline Kinase Crystal Structures in Complex with the Products Adp or Phosphocholine. J.Mol.Biol., 364, 2006
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2CKP
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2CKQ
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2TMK
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4OSY
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4OSX
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4PVR
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4PVS
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2ZI9
| C4S-E247A dCK variant of dCK in complex with cladribine+ADP | Descriptor: | 2-chloro-2'-deoxyadenosine, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-07-08 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.51 Å) | Cite: | Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase J.Med.Chem., 51, 2008
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2ZIA
| C4S dCK variant of dCK in complex with cladribine+UDP | Descriptor: | 2-chloro-2'-deoxyadenosine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-07-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase J.Med.Chem., 51, 2008
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2ZI5
| C4S dCK variant of dCK in complex with L-dA+UDP | Descriptor: | (2S,3R,5S)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-04-22 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Structural basis for substrate promiscuity of dCK J.Mol.Biol., 378, 2008
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2ZI7
| C4S dCK variant of dCK in complex with D-dG+UDP | Descriptor: | 2'-DEOXY-GUANOSINE, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-07-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.97 Å) | Cite: | Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase J.Med.Chem., 51, 2008
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2ZI3
| C4S-E247A dCK variant of dCK in complex with D-dA+ADP | Descriptor: | (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-04-22 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural basis for substrate promiscuity of dCK J.Mol.Biol., 378, 2008
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2ZI4
| C4S dCK variant of dCK in complex with L-dA+ADP | Descriptor: | (2S,3R,5S)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase, ... | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-04-22 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural basis for substrate promiscuity of dCK J.Mol.Biol., 378, 2008
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2ZI6
| C4S dCK variant of dCK in complex with D-dA+UDP | Descriptor: | (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE | Authors: | Sabini, E, Lavie, A. | Deposit date: | 2008-02-13 | Release date: | 2008-04-22 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Structural basis for substrate promiscuity of dCK J.Mol.Biol., 378, 2008
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