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4PVQ
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BU of 4pvq by Molmil
Crystal structure of sulfate-bound human l-asparaginase protein
Descriptor: IODIDE ION, Isoaspartyl peptidase/L-asparaginase, SODIUM ION, ...
Authors:Nomme, J, Lavie, A.
Deposit date:2014-03-18
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4PVP
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BU of 4pvp by Molmil
Crystal structure of malonate-bound human L-asparaginase protein
Descriptor: Isoaspartyl peptidase/L-asparaginase, MALONATE ION, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-03-18
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4TMK
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BU of 4tmk by Molmil
COMPLEX OF E. COLI THYMIDYLATE KINASE WITH THE BISUBSTRATE INHIBITOR TP5A
Descriptor: P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE, PROTEIN (THYMIDYLATE KINASE)
Authors:Lavie, A, Ostermann, N, Schlichting, I.
Deposit date:1998-08-31
Release date:1998-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for efficient phosphorylation of 3'-azidothymidine monophosphate by Escherichia coli thymidylate kinase.
Proc.Natl.Acad.Sci.USA, 95, 1998
3HP1
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BU of 3hp1 by Molmil
Crystal structure of human dCK R104M/D133A in complex with L-dT and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase, L-deoxythymidine
Authors:Hazra, S, Lavie, A.
Deposit date:2009-06-03
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Extending Thymidine Kinase Activity to the Catalytic Repertoire of Human Deoxycytidine Kinase.
Biochemistry, 48, 2009
3KFX
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BU of 3kfx by Molmil
Human dCK complex with 5-Me dC and ADP
Descriptor: 5-METHYL-2'-DEOXYCYTIDINE, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase
Authors:Hazra, S, Lavie, A.
Deposit date:2009-10-28
Release date:2010-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and kinetic characterization of human deoxycytidine kinase variants able to phosphorylate 5-substituted deoxycytidine and thymidine analogues .
Biochemistry, 49, 2010
3MJR
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BU of 3mjr by Molmil
Human dCK complex with Acyclic Nucleoside
Descriptor: 9-HYROXYETHOXYMETHYLGUANINE, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Hazra, S, Lavie, A.
Deposit date:2010-04-13
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Sugar Ring of the Nucleoside Is Required for Productive Substrate Positioning in the Active Site of Human Deoxycytidine Kinase (dCK): Implications for the Development of dCK-Activated Acyclic Guanine Analogues.
J.Med.Chem., 53, 2010
3QEO
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BU of 3qeo by Molmil
S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP
Descriptor: Deoxycytidine kinase, L-deoxythymidine, URIDINE-5'-DIPHOSPHATE
Authors:Lavie, A, Hazra, S.
Deposit date:2011-01-20
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release.
Biochemistry, 50, 2011
3QEN
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BU of 3qen by Molmil
S74E dCK in complex with 5-bromodeoxycytidine and UDP
Descriptor: 5-bromo-2'-deoxycytidine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Lavie, A, Hazra, S.
Deposit date:2011-01-20
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release.
Biochemistry, 50, 2011
3QEJ
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BU of 3qej by Molmil
S74E-dCK mutant in complex with UDP
Descriptor: Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Hazra, S, Lavie, A.
Deposit date:2011-01-20
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release.
Biochemistry, 50, 2011
1NCL
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BU of 1ncl by Molmil
THERMAL STABILITY OF HEXAMERIC AND TETRAMERIC NUCLEOSIDE, DIPHOSPHATE KINASES
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Janin, J, Morera, S, Lascu, I.
Deposit date:1996-03-22
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Thermal stability of hexameric and tetrameric nucleoside diphosphate kinases. Effect of subunit interaction.
J.Biol.Chem., 271, 1996
2CKO
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BU of 2cko by Molmil
Crystal structure of Human Choline Kinase alpha 2
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHOLINE KINASE ALPHA
Authors:Malito, E, Lavie, A.
Deposit date:2006-04-20
Release date:2006-10-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Elucidation of Human Choline Kinase Crystal Structures in Complex with the Products Adp or Phosphocholine.
J.Mol.Biol., 364, 2006
2CKP
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BU of 2ckp by Molmil
Crystal structure of Human Choline Kinase alpha-2 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHOLINE KINASE ALPHA
Authors:Malito, E, Lavie, A.
Deposit date:2006-04-20
Release date:2006-10-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Elucidation of Human Choline Kinase Crystal Structures in Complex with the Products Adp or Phosphocholine.
J.Mol.Biol., 364, 2006
2CKQ
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BU of 2ckq by Molmil
Crystal structure of Human Choline Kinase alpha 2 in complex with Phosphocholine
Descriptor: CHOLINE KINASE ALPHA, PHOSPHOCHOLINE
Authors:Malito, E, Lavie, A.
Deposit date:2006-04-20
Release date:2006-10-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Elucidation of Human Choline Kinase Crystal Structures in Complex with the Products Adp or Phosphocholine.
J.Mol.Biol., 364, 2006
2TMK
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BU of 2tmk by Molmil
YEAST THYMIDYLATE KINASE COMPLEXED WITH 3'-AZIDO-3'-DEOXYTHYMIDINE MONOPHOSPHATE (AZT-MP)
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, SULFATE ION, THYMIDYLATE KINASE
Authors:Lavie, A, Schlichting, I.
Deposit date:1997-06-12
Release date:1998-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of thymidylate kinase reveals the cause behind the limiting step in AZT activation.
Nat.Struct.Biol., 4, 1997
4OSY
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BU of 4osy by Molmil
STRUCTURE of FULLY-CLEAVED GLYCINE-BOUND HUMAN L-ASPARAGINASE PROTEIN
Descriptor: GLYCINE, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-02-13
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Free glycine accelerates the autoproteolytic activation of human asparaginase.
Chem.Biol., 20, 2013
4OSX
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BU of 4osx by Molmil
STRUCTURE of UNCLEAVED GLYCINE-BOUND HUMAN L-ASPARAGINASE PROTEIN
Descriptor: GLYCINE, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-02-13
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Free Glycine Accelerates the Autoproteolytic Activation of Human Asparaginase.
Chem.Biol., 20, 2013
4PVR
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BU of 4pvr by Molmil
Crystal structure of partially-cleaved human l-asparaginase protein in complex with l-aspartate
Descriptor: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-03-18
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4PVS
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BU of 4pvs by Molmil
Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate
Descriptor: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
Authors:Nomme, J, Lavie, A.
Deposit date:2014-03-18
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
2ZI9
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BU of 2zi9 by Molmil
C4S-E247A dCK variant of dCK in complex with cladribine+ADP
Descriptor: 2-chloro-2'-deoxyadenosine, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-07-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase
J.Med.Chem., 51, 2008
2ZIA
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BU of 2zia by Molmil
C4S dCK variant of dCK in complex with cladribine+UDP
Descriptor: 2-chloro-2'-deoxyadenosine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase
J.Med.Chem., 51, 2008
2ZI5
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BU of 2zi5 by Molmil
C4S dCK variant of dCK in complex with L-dA+UDP
Descriptor: (2S,3R,5S)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural basis for substrate promiscuity of dCK
J.Mol.Biol., 378, 2008
2ZI7
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BU of 2zi7 by Molmil
C4S dCK variant of dCK in complex with D-dG+UDP
Descriptor: 2'-DEOXY-GUANOSINE, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase
J.Med.Chem., 51, 2008
2ZI3
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BU of 2zi3 by Molmil
C4S-E247A dCK variant of dCK in complex with D-dA+ADP
Descriptor: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-04-22
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for substrate promiscuity of dCK
J.Mol.Biol., 378, 2008
2ZI4
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BU of 2zi4 by Molmil
C4S dCK variant of dCK in complex with L-dA+ADP
Descriptor: (2S,3R,5S)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase, ...
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-04-22
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for substrate promiscuity of dCK
J.Mol.Biol., 378, 2008
2ZI6
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BU of 2zi6 by Molmil
C4S dCK variant of dCK in complex with D-dA+UDP
Descriptor: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Sabini, E, Lavie, A.
Deposit date:2008-02-13
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural basis for substrate promiscuity of dCK
J.Mol.Biol., 378, 2008

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