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1T7D
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BU of 1t7d by Molmil
Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor
分子名称: 10-METHYLUNDECANOIC ACID, ARYLOMYCIN A2, SIGNAL PEPTIDASE I
著者Paetzel, M, Goodall, J.J, Kania, M, Dalbey, R.E, Page, M.G.P.
登録日2004-05-09
公開日2004-07-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystallographic and Biophysical Analysis of a Bacterial Signal Peptidase in Complex with a Lipopeptide Based Inhibitor.
J.Biol.Chem., 279, 2004
1B12
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BU of 1b12 by Molmil
CRYSTAL STRUCTURE OF TYPE 1 SIGNAL PEPTIDASE FROM ESCHERICHIA COLI IN COMPLEX WITH A BETA-LACTAM INHIBITOR
分子名称: PHOSPHATE ION, SIGNAL PEPTIDASE I, prop-2-en-1-yl (2S)-2-[(2S,3R)-3-(acetyloxy)-1-oxobutan-2-yl]-2,3-dihydro-1,3-thiazole-4-carboxylate
著者Paetzel, M, Dalbey, R, Strynadka, N.C.J.
登録日1999-11-24
公開日1999-12-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of a bacterial signal peptidase in complex with a beta-lactam inhibitor.
Nature, 396, 1998
1KN9
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BU of 1kn9 by Molmil
CRYSTAL STRUCTURE OF A BACTERIAL SIGNAL PEPTIDASE APO-ENZYME, IMPLICATIONS FOR SIGNAL PEPTIDE BINDING AND THE SER-LYS DYAD MECHANISM.
分子名称: Signal peptidase I
著者Paetzel, M, Dalbey, R.E, Strynadka, N.C.J.
登録日2001-12-18
公開日2002-01-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a bacterial signal peptidase apoenzyme: implications for signal peptide binding and the Ser-Lys dyad mechanism
J.Biol.Chem., 277, 2002
1FOF
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BU of 1fof by Molmil
CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10
分子名称: BETA LACTAMASE OXA-10, COBALT (II) ION, SULFATE ION
著者Paetzel, M, Danel, F, de Castro, L, Mosimann, S.C, Page, M.G.P, Strynadka, N.C.J.
登録日2000-08-28
公開日2000-10-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the class D beta-lactamase OXA-10.
Nat.Struct.Biol., 7, 2000
3IIQ
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BU of 3iiq by Molmil
Crystallographic analysis of bacterial signal peptidase in ternary complex with Arylomycin A2 and a beta-sultam inhibitor
分子名称: 10-METHYLUNDECANOIC ACID, 4-[(1,1-dioxido-1,2-thiazetidin-2-yl)carbonyl]morpholine, ACETONITRILE, ...
著者Paetzel, M.
登録日2009-08-03
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic Analysis of Bacterial Signal Peptidase in Ternary Complex with Arylomycin A2 and a Beta-Sultam Inhibitor.
Biochemistry, 48, 2009
2GEF
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BU of 2gef by Molmil
Crystal structure of a Novel viral protease with a serine/lysine catalytic dyad mechanism
分子名称: Protease VP4
著者Paetzel, M, Feldman, A.R, Lee, J, Delmas, B.
登録日2006-03-20
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a novel viral protease with a serine/lysine catalytic dyad mechanism
J.Mol.Biol., 358, 2006
2PNL
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BU of 2pnl by Molmil
Crystal structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P1
分子名称: GUANIDINE, Protease VP4
著者Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
登録日2007-04-24
公開日2007-06-05
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
2PNM
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BU of 2pnm by Molmil
Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122
分子名称: Protease VP4
著者Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
登録日2007-04-24
公開日2007-06-05
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
3BEZ
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BU of 3bez by Molmil
Crystal structure of Escherichia coli Signal peptide peptidase (SppA), SeMet crystals
分子名称: Protease 4
著者Paetzel, M.
登録日2007-11-20
公開日2007-12-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Crystal structure of a bacterial signal Peptide peptidase.
J.Mol.Biol., 376, 2008
3BF0
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BU of 3bf0 by Molmil
Crystal structure of Escherichia coli Signal peptide peptidase (SppA), Native crystals
分子名称: Protease 4
著者Paetzel, M.
登録日2007-11-20
公開日2007-12-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of a bacterial signal Peptide peptidase.
J.Mol.Biol., 376, 2008
3BLC
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BU of 3blc by Molmil
Crystal structure of the periplasmic domain of the Escherichia Coli YIDC
分子名称: Inner membrane protein oxaA
著者Paetzel, M, Oliver, D.C.
登録日2007-12-10
公開日2007-12-25
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Major Periplasmic Domain of the Bacterial Membrane Protein Assembly Facilitator YidC.
J.Biol.Chem., 283, 2008
4IZJ
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BU of 4izj by Molmil
Crystal structure of yellowtail ascites virus VP4 protease with a wild-type active site reveals acyl-enzyme complexes and product complexes.
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, MAGNESIUM ION, ...
著者Paetzel, M, Chung, I.Y.W.
登録日2013-01-30
公開日2013-02-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
4IZK
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BU of 4izk by Molmil
Crystal structure of yellowtail ascites virus VP4 protease active site mutant (K674A) reveals both an acyl-enzyme complex and an empty active site
分子名称: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Yellowtail Ascites Virus (YAV) VP4 protease
著者Paetzel, M, Chung, I.Y.W.
登録日2013-01-30
公開日2013-02-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
3S04
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BU of 3s04 by Molmil
Crystal structure of Escherichia coli type I signal peptidase in complex with an Arylomycin Lipoglycopeptide Antibiotic
分子名称: 14-methylhexadec-9-enoic acid, Glyco-Arylomycin, Signal peptidase I, ...
著者Paetzel, M, Luo, C.
登録日2011-05-13
公開日2011-10-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Synthesis and characterization of the arylomycin lipoglycopeptide antibiotics and the crystallographic analysis of their complex with signal peptidase.
J.Am.Chem.Soc., 133, 2011
3TGO
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BU of 3tgo by Molmil
Crystal structure of the E. coli BamCD complex
分子名称: CHLORIDE ION, GLYCEROL, Lipoprotein 34, ...
著者Paetzel, M, Kim, K.H, Aulakh, S.
登録日2011-08-17
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the beta-barrel assembly machinery BamCD protein complex
J.Biol.Chem., 286, 2011
3P06
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BU of 3p06 by Molmil
Crystal structure of Tellina virus 1 VP4 protease in the form of an intra-molecular(cis)acyl-enzyme complex.
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
著者Chung, I.Y.W, Paetzel, M.
登録日2010-09-27
公開日2011-02-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of a Viral Protease Intramolecular Acyl-enzyme Complex: INSIGHTS INTO cis-CLEAVAGE AT THE VP4/VP3 JUNCTION OF TELLINA BIRNAVIRUS.
J.Biol.Chem., 286, 2011
4KWB
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BU of 4kwb by Molmil
Structure of signal peptide peptidase A with C-termini bound in the active sites: insights into specificity, self-processing and regulation
分子名称: Signal peptide peptidase SppA
著者Nam, S.E, Paetzel, M.
登録日2013-05-23
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of signal peptide peptidase A with C-termini bound in the active sites: insights into specificity, self-processing, and regulation.
Biochemistry, 52, 2013
2KXX
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BU of 2kxx by Molmil
NMR Structure of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex
分子名称: Small protein A
著者Kim, K, Okon, M, Escobar, E, Kang, H, McIntosh, L, Paetzel, M.
登録日2010-05-13
公開日2011-01-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural Characterization of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex.
Biochemistry, 50, 2011
1ERM
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BU of 1erm by Molmil
X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-1-ACETAMIDO-2-(3-CARBOXYPHENYL)ETHANE BORONIC ACID
分子名称: 1(R)-1-ACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
著者Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
登録日2000-04-06
公開日2000-05-10
最終更新日2012-06-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
7JOY
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Product structure of SARS-CoV-2 Mpro C145A mutant in complex with its C-terminal autoprocessing sequence.
分子名称: 3C-like proteinase
著者Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
登録日2020-08-07
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
1ERQ
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BU of 1erq by Molmil
X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-1-ACETAMIDO-2-(3-CARBOXY-2-HYDROXYPHENYL)ETHYL BORONIC ACID
分子名称: 1(R)-1-ACETAMIDO-2-(3-CARBOXY-2-HYDROXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
著者Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
登録日2000-04-06
公開日2000-05-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
7JP1
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BU of 7jp1 by Molmil
Structure of wild-type substrate free SARS-CoV-2 Mpro.
分子名称: 3C-like proteinase
著者Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
登録日2020-08-07
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
1ERO
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BU of 1ero by Molmil
X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID
分子名称: (1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
著者Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
登録日2000-04-06
公開日2000-05-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
7KHP
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Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence.
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
登録日2020-10-21
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
3HL4
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Crystal structure of a mammalian CTP:phosphocholine cytidylyltransferase with CDP-choline
分子名称: Choline-phosphate cytidylyltransferase A, FORMIC ACID, GLYCEROL, ...
著者Lee, J, Paetzel, M, Cornell, R.B.
登録日2009-05-26
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a mammalian CTP: Phosphocholine cytidylyltransferase catalytic domain reveals novel active site residues within a highly conserved nucleotidyl-transferase fold
J.Biol.Chem., 284, 2009

 

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