Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3FPR
DownloadVisualize
BU of 3fpr by Molmil
Crystal Structure of Evasin-1
分子名称: Evasin-1
著者Dias, J.M, Shaw, J.P.
登録日2009-01-06
公開日2010-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
1NML
DownloadVisualize
BU of 1nml by Molmil
Di-haemic Cytochrome c Peroxidase from Pseudomonas nautica 617, form IN (pH 4.0)
分子名称: CITRIC ACID, HEME C, di-haem cytochrome c peroxidase
著者Dias, J.M, Bonifacio, C, Alves, T, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
登録日2003-01-10
公開日2004-01-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617
Structure, 12, 2004
1RZ6
DownloadVisualize
BU of 1rz6 by Molmil
Di-haem Cytochrome c Peroxidase, Form IN
分子名称: CITRIC ACID, Cytochrome c peroxidase, HEME C
著者Dias, J.M, Alves, T, Bonifacio, C, Pereira, A, Bourgeois, D, Moura, I, Romao, M.J.
登録日2003-12-24
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
1RZ5
DownloadVisualize
BU of 1rz5 by Molmil
Di-haem Cytochrome c Peroxidase, Form OUT
分子名称: CALCIUM ION, Cytochrome c peroxidase, HEME C
著者Dias, J.M, Alves, T, Bonifacio, C, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
登録日2003-12-24
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
2NAP
DownloadVisualize
BU of 2nap by Molmil
DISSIMILATORY NITRATE REDUCTASE (NAP) FROM DESULFOVIBRIO DESULFURICANS
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Dias, J.M, Than, M, Humm, A, Huber, R, Bourenkov, G, Bartunik, H, Bursakov, S, Calvete, J, Caldeira, J, Carneiro, C, Moura, J, Moura, I, Romao, M.J.
登録日1998-09-18
公開日1999-09-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the first dissimilatory nitrate reductase at 1.9 A solved by MAD methods.
Structure Fold.Des., 7, 1999
6I31
DownloadVisualize
BU of 6i31 by Molmil
Crystal structure of the tick chemokine-binding protein Evasin-3
分子名称: CADMIUM ION, Evasin-3
著者Dias, J.M, Shaw, J.P.
登録日2018-11-02
公開日2019-06-19
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A knottin scaffold directs the CXC-chemokine-binding specificity of tick evasins.
J.Biol.Chem., 294, 2019
3FPT
DownloadVisualize
BU of 3fpt by Molmil
The Crystal Structure of the Complex between Evasin-1 and CCL3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Evasin-1
著者Shaw, J.P, Dias, J.M.
登録日2009-01-06
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
3FPU
DownloadVisualize
BU of 3fpu by Molmil
The crystallographic structure of the Complex between Evasin-1 and CCL3
分子名称: C-C motif chemokine 3, Evasin-1, NICKEL (II) ION
著者Shaw, J.P, Dias, J.M.
登録日2009-01-06
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
3S88
DownloadVisualize
BU of 3s88 by Molmil
Crystal structure of Sudan Ebolavirus Glycoprotein (strain Gulu) bound to 16F6
分子名称: 16F6 - Heavy chain, 16F6 - Light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Saphire, E.O, Dias, J.M, Bale, S.
登録日2011-05-27
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.351 Å)
主引用文献A shared structural solution for neutralizing ebolaviruses.
Nat.Struct.Mol.Biol., 18, 2011
8DKB
DownloadVisualize
BU of 8dkb by Molmil
Crystal Structure of human YEATS4 in complex with Pfizer small molecule compound 3b
分子名称: N-ethyl-1-{(3S,4S)-1-[(1-hydroxycyclohexyl)methyl]-3-methylpiperidin-4-yl}-2-methyl-1H-benzimidazole-5-carboxamide, YEATS domain-containing protein 4
著者Dias, J.M, Byrnes, L.J, Varghese, A.H.
登録日2022-07-05
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Discovery of High-Affinity Small-Molecule Binders of the Epigenetic Reader YEATS4.
J.Med.Chem., 66, 2023
1DGJ
DownloadVisualize
BU of 1dgj by Molmil
CRYSTAL STRUCTURE OF THE ALDEHYDE OXIDOREDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774
分子名称: ALDEHYDE OXIDOREDUCTASE, FE2/S2 (INORGANIC) CLUSTER, MOLYBDENUM (IV)OXIDE, ...
著者Rebelo, J.M, Macieira, S, Dias, J.M, Huber, R, Romao, M.J.
登録日1999-11-24
公開日2000-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Gene sequence and crystal structure of the aldehyde oxidoreductase from Desulfovibrio desulfuricans ATCC 27774.
J.Mol.Biol., 297, 2000
8TB0
DownloadVisualize
BU of 8tb0 by Molmil
Cryo-EM Structure of GPR61-G protein complex stabilized by scFv16
分子名称: GPR61 fused to dominant negative G alpha S/I N18 chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Lees, J.A, Dias, J.M, Han, S.
登録日2023-06-28
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism.
Nat Commun, 14, 2023
8TB7
DownloadVisualize
BU of 8tb7 by Molmil
Cryo-EM Structure of GPR61-
分子名称: 6-{[(3,5-difluoropyridin-4-yl)methyl]amino}-N-(4-ethoxy-6-methylpyrimidin-2-yl)-2-methoxy-N-(2-methoxyethyl)pyridine-3-sulfonamide, Fab hinge-binding nanobody, Fab24 BAK5 heavy chain, ...
著者Lees, J.A, Dias, J.M, Han, S.
登録日2023-06-28
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism.
Nat Commun, 14, 2023
3VE0
DownloadVisualize
BU of 3ve0 by Molmil
Crystal structure of Sudan Ebolavirus Glycoprotein (strain Boniface) bound to 16F6
分子名称: 16F6 Antibody chain A, 16F6 Antibody chain B, Envelope glycoprotein, ...
著者Saphire, E.O, Bale, S, Dias, J.M.
登録日2012-01-06
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.353 Å)
主引用文献Structural basis for differential neutralization of ebolaviruses.
Viruses, 4, 2012
7S15
DownloadVisualize
BU of 7s15 by Molmil
GLP-1 receptor bound with Pfizer small molecule agonist
分子名称: 2-[(4-{6-[(2,4-difluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-[(1-ethyl-1H-imidazol-5-yl)methyl]-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
著者Liu, Y, Dias, J.M, Han, S.
登録日2021-09-01
公開日2022-06-08
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A Small-Molecule Oral Agonist of the Human Glucagon-like Peptide-1 Receptor.
J.Med.Chem., 65, 2022
1VLB
DownloadVisualize
BU of 1vlb by Molmil
STRUCTURE REFINEMENT OF THE ALDEHYDE OXIDOREDUCTASE FROM DESULFOVIBRIO GIGAS AT 1.28 A
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ALDEHYDE OXIDOREDUCTASE, CHLORIDE ION, ...
著者Rebelo, J.M, Dias, J.M, Huber, R, Moura, J.J.G, Romao, M.J.
登録日2004-07-20
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structure refinement of the aldehyde oxidoreductase from Desulfovibrio gigas (MOP) at 1.28 A
J.Biol.Inorg.Chem., 6, 2001
1Z1N
DownloadVisualize
BU of 1z1n by Molmil
Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, HEME C, ...
著者Santos-Silva, T, Dias, J.M, Romao, M.J.
登録日2005-03-04
公開日2006-04-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas
to be published
1OAH
DownloadVisualize
BU of 1oah by Molmil
Cytochrome c Nitrite Reductase from Desulfovibrio desulfuricans ATCC 27774: The relevance of the two calcium sites in the structure of the catalytic subunit (NrfA).
分子名称: CALCIUM ION, CHLORIDE ION, CYTOCHROME C NITRITE REDUCTASE, ...
著者Cunha, C.A, Macieira, S, Dias, J.M, Almeida, G, Goncalves, L.L, Costa, C, Lampreia, J, Huber, R, Moura, J.J.G, Moura, I, Romao, M.J.
登録日2003-01-14
公開日2003-05-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cytochrome C Nitrite Reductase from Desulfovibrio Desulfuricans Atcc 27774. The Relevance of the Two Calcium Sites in the Structure of the Catalytic Subunit (Nrfa)
J.Biol.Chem., 278, 2003
1SPP
DownloadVisualize
BU of 1spp by Molmil
THE CRYSTAL STRUCTURES OF TWO MEMBERS OF THE SPERMADHESIN FAMILY REVEAL THE FOLDING OF THE CUB DOMAIN
分子名称: MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-I, MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-II
著者Romero, A, Romao, M.J, Varela, P.F, Kolln, I, Dias, J.M, Carvalho, A.L, Sanz, L, Topfer-Petersen, E, Calvete, J.J.
登録日1997-06-19
公開日1998-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structures of two spermadhesins reveal the CUB domain fold.
Nat.Struct.Biol., 4, 1997
1SFP
DownloadVisualize
BU of 1sfp by Molmil
CRYSTAL STRUCTURE OF ACIDIC SEMINAL FLUID PROTEIN (ASFP) AT 1.9 A RESOLUTION: A BOVINE POLYPEPTIDE FROM THE SPERMADHESIN FAMILY
分子名称: ASFP
著者Romao, M.J, Kolln, I, Dias, J.M, Carvalho, A.L, Romero, A, Varela, P.F, Sanz, L, Topfer-Petersen, E, Calvete, J.J.
登録日1997-06-24
公開日1998-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structures of two spermadhesins reveal the CUB domain fold.
Nat.Struct.Biol., 4, 1997
1H0H
DownloadVisualize
BU of 1h0h by Molmil
Tungsten containing Formate Dehydrogenase from Desulfovibrio Gigas
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Raaijmakers, H.C.A.
登録日2002-06-19
公開日2003-02-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Gene Sequence and the 1.8 A Crystal Structure of the Tungsten-Containing Formate Dehydrogenase from Desulfovibrio Gigas
Structure, 10, 2002
6ZG4
DownloadVisualize
BU of 6zg4 by Molmil
Structure of M1-StaR-T4L in complex with HTL0009936 at 2.35A
分子名称: Muscarinic acetylcholine receptor M1,Endolysin,Muscarinic acetylcholine receptor M1, OLEIC ACID, PHOSPHATE ION, ...
著者Rucktooa, P, Cooke, R.M.
登録日2020-06-18
公開日2021-10-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献From structure to clinic: Design of a muscarinic M1 receptor agonist with potential to treatment of Alzheimer's disease.
Cell, 184, 2021
6ZFZ
DownloadVisualize
BU of 6zfz by Molmil
Structure of M1-StaR-T4L in complex with 77-LH-28-1 at 2.17A
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[3-(4-butylpiperidin-1-yl)propyl]-3,4-dihydroquinolin-2-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Rucktooa, P, Cooke, R.M.
登録日2020-06-18
公開日2021-10-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献From structure to clinic: Design of a muscarinic M1 receptor agonist with potential to treatment of Alzheimer's disease.
Cell, 184, 2021
6ZG9
DownloadVisualize
BU of 6zg9 by Molmil
Structure of M1-StaR-T4L in complex with GSK1034702 at 2.5A
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 7-fluoranyl-5-methyl-3-[1-(oxan-4-yl)piperidin-4-yl]-1~{H}-benzimidazol-2-one, Muscarinic acetylcholine receptor M1,Endolysin,Muscarinic acetylcholine receptor M1, ...
著者Rucktooa, P, Cooke, R.M.
登録日2020-06-18
公開日2021-10-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From structure to clinic: Design of a muscarinic M1 receptor agonist with potential to treatment of Alzheimer's disease.
Cell, 184, 2021
1SIJ
DownloadVisualize
BU of 1sij by Molmil
Crystal structure of the Aldehyde Dehydrogenase (a.k.a. AOR or MOP) of Desulfovibrio gigas covalently bound to [AsO3]-
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ARSENITE, Aldehyde oxidoreductase, ...
著者Boer, D.R, Thapper, A, Brondino, C.D, Romao, M.J, Moura, J.J.G.
登録日2004-03-01
公開日2004-07-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray Crystal Structure and EPR Spectra of "Arsenite-Inhibited" Desulfovibriogigas Aldehyde Dehydrogenase: A Member of the Xanthine Oxidase Family
J.Am.Chem.Soc., 126, 2004

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon