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2LYF
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BU of 2lyf by Molmil
High resolution NMR solution structure of the theta-defensin RTD-1
Descriptor: RTD-1
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-09-18
Release date:2012-11-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
2M2G
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BU of 2m2g by Molmil
Solution structure of the antimicrobial peptide [Aba3,16]BTD-2
Descriptor: [Aba3,16]BTD-2
Authors:Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J.
Deposit date:2012-12-20
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity.
J.Biol.Chem., 288, 2013
2M2Q
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BU of 2m2q by Molmil
Solution structure of MCh-1: A novel inhibitor cystine knot peptide from Momordica charantia
Descriptor: Inhibitor cystine knot peptide MCh-1
Authors:He, W, Chan, L, Clark, R.J, Tang, J, Zeng, G, Franco, O.L, Cantacessi, C, Craik, D.J, Daly, N.L, Tan, N.
Deposit date:2013-01-01
Release date:2013-11-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Novel Inhibitor Cystine Knot Peptides from Momordica charantia.
Plos One, 8, 2013
2MP8
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BU of 2mp8 by Molmil
NMR structure of NKR-5-3B
Descriptor: NKR-5-3B
Authors:Rosengren, K.J, Craik, D.J.
Deposit date:2014-05-13
Release date:2015-05-13
Last modified:2016-06-01
Method:SOLUTION NMR
Cite:Identification, Characterization, and Three-Dimensional Structure of the Novel Circular Bacteriocin, Enterocin NKR-5-3B, from Enterococcus faecium
Biochemistry, 54, 2015
2N2Q
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BU of 2n2q by Molmil
NMR solution structure of HsAFP1
Descriptor: Defensin-like protein 1
Authors:Harvey, P.J, Craik, D.J, Vriens, K.
Deposit date:2015-05-11
Release date:2015-07-22
Last modified:2015-08-19
Method:SOLUTION NMR
Cite:Synergistic Activity of the Plant Defensin HsAFP1 and Caspofungin against Candida albicans Biofilms and Planktonic Cultures.
Plos One, 10, 2015
6MK4
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BU of 6mk4 by Molmil
Solution NMR structure of spider toxin analogue [E17K]ProTx-II
Descriptor: Beta/omega-theraphotoxin-Tp2a
Authors:Schroeder, C.I.
Deposit date:2018-09-25
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
6DKZ
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BU of 6dkz by Molmil
Racemic structure of ribifolin, an orbitide from Jatropha ribifolia
Descriptor: ribifolin
Authors:Wang, C.K, King, G.J, Ramalho, S.D.
Deposit date:2018-05-31
Release date:2018-11-14
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Synthesis, Racemic X-ray Crystallographic, and Permeability Studies of Bioactive Orbitides from Jatropha Species.
J. Nat. Prod., 81, 2018
3E4H
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BU of 3e4h by Molmil
Crystal structure of the cyclotide varv F
Descriptor: Varv peptide F,Varv peptide F
Authors:Hu, S.H.
Deposit date:2008-08-11
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Combined X-ray and NMR Analysis of the Stability of the Cyclotide Cystine Knot Fold That Underpins Its Insecticidal Activity and Potential Use as a Drug Scaffold
J.Biol.Chem., 284, 2009
4NE9
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BU of 4ne9 by Molmil
PCSK9 in complex with LDLR peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Low-density lipoprotein receptor, ...
Authors:Liu, S.
Deposit date:2013-10-28
Release date:2014-09-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design and synthesis of truncated EGF-A peptides that restore LDL-R recycling in the presence of PCSK9 in vitro.
Chem.Biol., 21, 2014
8FEG
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BU of 8feg by Molmil
CryoEM structure of Kappa Opioid Receptor bound to a semi-peptide and Gi1
Descriptor: ACE-TYR-ALA-DTY-THR-THR-CYS-THR-DPN-XT9, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Fay, J.F, Che, T.
Deposit date:2022-12-06
Release date:2023-12-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Design and structural validation of peptide-drug conjugate ligands of the kappa-opioid receptor.
Nat Commun, 14, 2023
2BC8
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BU of 2bc8 by Molmil
[Sec2,3,8,12]-ImI
Descriptor: Alpha-conotoxin ImI
Authors:Armishaw, C.J.
Deposit date:2005-10-18
Release date:2006-03-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:{alpha}-Selenoconotoxins, a New Class of Potent {alpha}7 Neuronal Nicotinic Receptor Antagonists.
J.Biol.Chem., 281, 2006
2BC7
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BU of 2bc7 by Molmil
Solution structure of [Sec2,8]-ImI
Descriptor: Alpha-conotoxin ImI
Authors:Armishaw, C.J.
Deposit date:2005-10-18
Release date:2006-03-14
Last modified:2014-08-06
Method:SOLUTION NMR
Cite:{alpha}-Selenoconotoxins, a New Class of Potent {alpha}7 Neuronal Nicotinic Receptor Antagonists.
J.Biol.Chem., 281, 2006
5JG9
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BU of 5jg9 by Molmil
Crystal structure of the de novo mini protein gEHEE_06
Descriptor: CHLORIDE ION, GLYCEROL, de novo design, ...
Authors:Rupert, P.B, Johnsen, W.A.
Deposit date:2016-04-19
Release date:2016-09-28
Last modified:2016-11-02
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
5JI4
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BU of 5ji4 by Molmil
Solution structure of the de novo mini protein gEEHE_02
Descriptor: W37
Authors:Buchko, G.W, Bahl, C.D, Pulavarti, S.V, Baker, D, Szyperski, T.
Deposit date:2016-04-21
Release date:2016-09-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
5JHI
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BU of 5jhi by Molmil
Solution structure of the de novo mini protein gEHE_06
Descriptor: W35
Authors:Buchko, G.W, Bahl, C.D, Gilmore, J.M, Pulavarti, S.V, Baker, D, Szyperski, T.
Deposit date:2016-04-21
Release date:2016-09-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
2N8E
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BU of 2n8e by Molmil
Three-dimensional structure of cyclic PVIIA
Descriptor: Kappa-conotoxin PVIIA
Authors:Kwon, S, Schroeder, C, Craik, D.
Deposit date:2015-10-13
Release date:2016-08-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Efficient enzymatic cyclization of an inhibitory cystine knot-containing peptide.
Biotechnol.Bioeng., 113, 2016
3P8F
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BU of 3p8f by Molmil
Crystal Structure of MT-SP1 in complex with SFTI-1
Descriptor: GLUTATHIONE, ST14 protein, Trypsin inhibitor 1
Authors:Yuan, C, Huang, M, Chen, L.
Deposit date:2010-10-13
Release date:2011-08-10
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of catalytic domain of Matriptase in complex with Sunflower trypsin inhibitor-1.
Bmc Struct.Biol., 11, 2011
3P8G
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BU of 3p8g by Molmil
Crystal Structure of MT-SP1 in complex with benzamidine
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, GLUTATHIONE, ...
Authors:Yuan, C, Huang, M, Chen, L.
Deposit date:2010-10-13
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of catalytic domain of Matriptase in complex with Sunflower trypsin inhibitor-1.
Bmc Struct.Biol., 11, 2011
2RU2
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BU of 2ru2 by Molmil
NMR solution structure of [G5,T7,S9]-oxytocin
Descriptor: [G5,T7,S9]-oxytocin
Authors:Harvey, P, Craik, D.
Deposit date:2013-11-08
Release date:2014-10-22
Method:SOLUTION NMR
Cite:Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013
6CGX
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BU of 6cgx by Molmil
Backbone cyclised conotoxin Vc1.1 mutant - D11A, E14A
Descriptor: Alpha-conotoxin Vc1A
Authors:Clark, R.J.
Deposit date:2018-02-21
Release date:2018-05-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure-Activity Studies Reveal the Molecular Basis for GABAB-Receptor Mediated Inhibition of High Voltage-Activated Calcium Channels by alpha-Conotoxin Vc1.1.
ACS Chem. Biol., 13, 2018
6Q1U
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BU of 6q1u by Molmil
Structure of plasmin and peptide complex
Descriptor: 1-methyl-1H-1,2,3-triazole, GLY-ARG-ALA-TYR-LYS-SER-LYS-PRO-PRO-ILE-ALA-PHE-PRO-ASP, Plasminogen
Authors:Wu, G, Law, R.H.P.
Deposit date:2019-08-06
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3467 Å)
Cite:Application and Structural Analysis of Triazole-Bridged Disulfide Mimetics in Cyclic Peptides.
Angew.Chem.Int.Ed.Engl., 59, 2020
7RMQ
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BU of 7rmq by Molmil
Crystal structure of cycloviolacin O2
Descriptor: Cycloviolacin O2, D-[I11L]cycloviolacin O2, FORMIC ACID
Authors:Huang, Y.H, Du, Q.
Deposit date:2021-07-28
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules, 26, 2021
7RJF
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BU of 7rjf by Molmil
MOPD-1 mutant-L47W
Descriptor: MALONATE ION, ZINC ION, [L47W]MOPD-1
Authors:Huawu, Y, Conan, K.W, Gordon, J.K, Brett, M.C, Yen-Hua, H, David, J.C.
Deposit date:2021-07-20
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design of Potent Peptide Inhibitors of the PD-1:PD-L1 Interaction for Cancer Immunotherapy.
J.Am.Chem.Soc., 143, 2021
6MK5
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BU of 6mk5 by Molmil
Solution NMR structure of spider toxin analogue [F5A,M6F,T26L,K28R]GpTx-1
Descriptor: Toxin GTx1-15
Authors:Schroeder, C.I.
Deposit date:2018-09-25
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
5TLR
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BU of 5tlr by Molmil
Solution NMR structure of gHwTx-IV
Descriptor: Mu-theraphotoxin-Hs2a
Authors:Agwa, A.J, Schroeder, C.I.
Deposit date:2016-10-11
Release date:2017-02-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Spider peptide toxin HwTx-IV engineered to bind to lipid membranes has an increased inhibitory potency at human voltage-gated sodium channel hNaV1.7.
Biochim. Biophys. Acta, 1859, 2017

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PDB entries from 2024-05-01

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