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7M2F
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BU of 7m2f by Molmil
CDK2 with compound 14 inhibitor with carboxylate
Descriptor: Cyclin-dependent kinase 2, [(1r,4r)-4-{4-[4-(5-fluoro-2-methoxyphenyl)-1H-pyrrolo[2,3-b]pyridin-2-yl]-3,6-dihydropyridin-1(2H)-yl}cyclohexyl]acetic acid
Authors:Longenecker, K.L, Qiu, W, Korepanova, A, Tong, Y.
Deposit date:2021-03-16
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Balancing Properties with Carboxylates: A Lead Optimization Campaign for Selective and Orally Active CDK9 Inhibitors.
Acs Med.Chem.Lett., 12, 2021
4RK4
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BU of 4rk4 by Molmil
Crystal structure of LacI family transcriptional regulator from Lactobacillus casei, Target EFI-512911, with bound glucose
Descriptor: SODIUM ION, Transcriptional regulator, LacI family, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-11
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystal Structure of LacI Transcriptional Regulator Lsei_2103 from Lactobacillus casei, Target EFI-512911
To be Published
4S0Q
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BU of 4s0q by Molmil
The X-ray structure of the adduct formed in the reaction between bovine pancreatic ribonuclease and carboplatin
Descriptor: Ribonuclease pancreatic, carboplatin
Authors:Merlino, A.
Deposit date:2015-01-04
Release date:2015-11-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Interactions of carboplatin and oxaliplatin with proteins: Insights from X-ray structures and mass spectrometry studies of their ribonuclease A adducts.
J.Inorg.Biochem., 153, 2015
4RM6
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BU of 4rm6 by Molmil
Crystal structure of Hemopexin Binding Protein
Descriptor: Heme/hemopexin-binding protein
Authors:Zambolin, S, Clantin, B, Haouz, A, Villeret, V, Delepelaire, P.
Deposit date:2014-10-20
Release date:2016-05-18
Last modified:2016-06-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for haem piracy from host haemopexin by Haemophilus influenzae.
Nat Commun, 7, 2016
4S1D
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BU of 4s1d by Molmil
Structure of IgG1 Fab fragment in complex with Biotincytidinamide
Descriptor: MAB M33 FAB FRAGMENT, heavy chain, light chain, ...
Authors:Dengl, S, Hoffmann, E, Grote, M, Wagner, C, Mundigl, O, Georges, G, Theorey, I, Stubenrauch, K.-G, Bujotzek, A, Josel, H.-P, Dziadek, S, Benz, J, Brinkmann, U.
Deposit date:2015-01-13
Release date:2015-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hapten-directed spontaneous disulfide shuffling: a universal technology for site-directed covalent coupling of payloads to antibodies.
Faseb J., 29, 2015
5J10
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BU of 5j10 by Molmil
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
Descriptor: peptide design 2L4HC2_24
Authors:Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G.
Deposit date:2016-03-28
Release date:2016-05-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
4S3N
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BU of 4s3n by Molmil
Crystal structure of human OAS3 domain I in complex with dsRNA
Descriptor: 2'-5'-oligoadenylate synthase 3, RNA (5'-R(*GP*GP*CP*UP*UP*UP*UP*GP*AP*CP*CP*UP*UP*UP*AP*UP*GP*AP*A)-3'), RNA (5'-R(*UP*UP*CP*AP*UP*AP*AP*AP*GP*GP*UP*CP*AP*AP*AP*AP*GP*CP*C)-3')
Authors:Donovan, J, Whitney, G, Rath, S, Korennykh, A.
Deposit date:2015-02-26
Release date:2015-03-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural mechanism of sensing long dsRNA via a noncatalytic domain in human oligoadenylate synthetase 3.
Proc.Natl.Acad.Sci.USA, 112, 2015
7MJR
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BU of 7mjr by Molmil
Vip4Da2 toxin structure
Descriptor: CALCIUM ION, SULFATE ION, Vip4Da1 protein
Authors:Rydel, T.J, Duda, D, Zheng, M, Henry, A.
Deposit date:2021-04-20
Release date:2021-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structural and functional insights into the first Bacillus thuringiensis vegetative insecticidal protein of the Vpb4 fold, active against western corn rootworm.
Plos One, 16, 2021
4RPE
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BU of 4rpe by Molmil
Crystal Structure of Variant G186E from Pseudomonas Aeruginosa Lipoxygenase 2 at 1.60A (C2)
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate, FE (II) ION, Linoleate 9/13-lipoxygenase
Authors:Carpena, X, Garreta, A, Herrero, L, Fita, I.
Deposit date:2014-10-30
Release date:2015-11-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Lipoxygenase 2 in space group C2
To be Published
2IBN
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BU of 2ibn by Molmil
Crystal structure of Human myo-Inositol Oxygenase (MIOX)
Descriptor: (2S,3R,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXANONE, CYSTEINE, FE (III) ION, ...
Authors:Hallberg, B.M, Busam, R.D, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hogbom, M, Holmberg-Schiavone, L, Johansson, I, Karlberg, T, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Ogg, D, Sagemark, J, Stenmark, P, Sundstrom, M, Uppenberg, J, Van Den Berg, S, Weigelt, J, Thorsell, A.G, Persson, C, Structural Genomics Consortium (SGC)
Deposit date:2006-09-11
Release date:2006-10-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Biophysical Characterization of Human myo-Inositol Oxygenase
J.Biol.Chem., 283, 2008
5JDR
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BU of 5jdr by Molmil
Structure of PD-L1
Descriptor: Programmed cell death 1 ligand 1
Authors:Zhou, A, Wei, H.
Deposit date:2016-04-17
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
4RT5
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BU of 4rt5 by Molmil
The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
Authors:Wu, R, Bearden, J, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-13
Release date:2014-12-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from Planctomyces limnophilus dsm 3776
TO BE PUBLISHED
7OWV
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BU of 7owv by Molmil
Crystal structure of IpgC in complex with a follow-up compound based on J20
Descriptor: 3-(4-chlorophenyl)-5-methylsulfanyl-1~{H}-pyrazole-4-carbonitrile, CHLORIDE ION, Chaperone protein IpgC, ...
Authors:Gardonyi, M, Heine, A, Klebe, G.
Deposit date:2021-06-19
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of IpgC in complex with a follow-up compound based on J20
To be published
4RU9
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BU of 4ru9 by Molmil
Crystal structure of human DNA polymerase eta inserting dCMPNPP opposite a MeFapy-dG adducted DNA template
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA polymerase eta, MAGNESIUM ION, ...
Authors:Patra, A, Egli, M.
Deposit date:2014-11-18
Release date:2015-08-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Basis for Error-Free Bypass of the 5-N-Methylformamidopyrimidine-dG Lesion by Human DNA Polymerase eta and Sulfolobus solfataricus P2 Polymerase IV.
J.Am.Chem.Soc., 137, 2015
7OWE
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BU of 7owe by Molmil
Odinarchaeota Adenylate kinase (OdinAK) in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Grundstrom, C, Aberg-Zingmark, E, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
4TLA
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BU of 4tla by Molmil
Crystal structure of N-terminal C1 domain of KaiC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Circadian clock protein kinase KaiC, ...
Authors:Abe, J, Hiyama, T.B, Mukaiyama, A, Son, S, Akiyama, S.
Deposit date:2014-05-29
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock.
Science, 349, 2015
5JDS
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BU of 5jds by Molmil
Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution
Descriptor: CHLORIDE ION, Nanobody, Programmed cell death 1 ligand 1, ...
Authors:Zhou, A, Wei, H.
Deposit date:2016-04-17
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade.
Cell Discov, 3, 2017
7OXL
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BU of 7oxl by Molmil
Crystal structure of human Spermine Oxidase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, FAD-MDL72527 adduct, ...
Authors:Impagliazzo, A, Johannsson, S, Thomsen, M, Krapp, S.
Deposit date:2021-06-22
Release date:2022-07-13
Last modified:2022-08-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of human spermine oxidase in complex with a highly selective allosteric inhibitor.
Commun Biol, 5, 2022
7MHN
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BU of 7mhn by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 277 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1908 Å)
Cite:The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro )
Iucrj, 9, 2022
8QEV
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BU of 8qev by Molmil
Crystal structure of ornithine transcarbamylase from Arabidopsis thaliana (AtOTC) in complex with carbamoyl phosphate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ornithine transcarbamylase, ...
Authors:Nielipinski, M, Pietrzyk-Brzezinska, A, Sekula, B.
Deposit date:2023-09-01
Release date:2023-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis and molecular substrate recognition properties of Arabidopsis thaliana ornithine transcarbamylase, the molecular target of phaseolotoxin produced by Pseudomonas syringae .
Front Plant Sci, 14, 2023
7OWL
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BU of 7owl by Molmil
Odinarchaeota Adenylate kinase (OdinAK) in complex with CTP
Descriptor: Adenylate kinase, CYTIDINE-5'-TRIPHOSPHATE
Authors:Aberg-Zingmark, E, Grundstrom, C, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
7OY0
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BU of 7oy0 by Molmil
Structure of human Spermine Oxidase in complex with a highly selective allosteric inhibitor
Descriptor: 4-[(4-imidazo[1,2-a]pyridin-3-yl-1,3-thiazol-2-yl)amino]phenol, CHLORIDE ION, FAD-MDL72527 adduct, ...
Authors:Impagliazzo, A, Thomsen, M, Johannsson, S, Krapp, S.
Deposit date:2021-06-23
Release date:2022-07-13
Last modified:2022-08-17
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure of human spermine oxidase in complex with a highly selective allosteric inhibitor.
Commun Biol, 5, 2022
7OWK
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BU of 7owk by Molmil
Odinarchaeota Adenylate kinase (OdinAK) in complex with dTTP
Descriptor: Adenylate kinase, THYMIDINE-5'-TRIPHOSPHATE
Authors:Aberg-Zingmark, E, Grundstrom, C, Verma, A, Wolf-Watz, M, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2021-06-18
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Insights into the evolution of enzymatic specificity and catalysis: From Asgard archaea to human adenylate kinases.
Sci Adv, 8, 2022
4GRJ
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BU of 4grj by Molmil
Crystal structure of nitrophorin 4 triple mutant complex with NO
Descriptor: NITRIC OXIDE, Nitrophorin-4, PHOSPHATE ION, ...
Authors:Weichsel, A, Issaian, A.V, Montfort, W.R.
Deposit date:2012-08-24
Release date:2013-08-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structures of nitrophorin 4 triple mutant
To be Published
4TND
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BU of 4tnd by Molmil
Crystal Structure of G Protein-Coupled Receptor Kinase 5 in Complex with AMP-PNP
Descriptor: G protein-coupled receptor kinase 5, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Bhardwaj, A, Komolov, K.E, Benovic, J.L.
Deposit date:2014-06-04
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Atomic Structure of G Protein-Coupled Receptor Kinase 5 (GRK5) Reveals Distinct Structural Features Novel for GRKs.
J.Biol.Chem., 2015

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