Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6HLN
DownloadVisualize
BU of 6hln by Molmil
Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of enterovirus-D68
Descriptor: Genome polyprotein, Golgi resident protein GCP60
Authors:Klima, M, Boura, E.
Deposit date:2018-09-11
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Convergent evolution in the mechanisms of ACBD3 recruitment to picornavirus replication sites.
Plos Pathog., 15, 2019
5LZ6
DownloadVisualize
BU of 5lz6 by Molmil
Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of Aichivirus B
Descriptor: 3A, Golgi resident protein GCP60, beta-D-glucopyranose
Authors:Klima, M, Boura, E.
Deposit date:2016-09-29
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Kobuviral Non-structural 3A Proteins Act as Molecular Harnesses to Hijack the Host ACBD3 Protein.
Structure, 25, 2017
5LVZ
DownloadVisualize
BU of 5lvz by Molmil
Crystal structure of yeast 14-3-3 protein from Lachancea thermotolerans
Descriptor: KLTH0G14146p
Authors:Klima, M, Boura, E.
Deposit date:2016-09-14
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of a yeast 14-3-3 protein from Lachancea thermotolerans in the unliganded form and bound to a human lipid kinase PI4KB-derived peptide reveal high evolutionary conservation.
Acta Crystallogr.,Sect.F, 72, 2016
5LZ1
DownloadVisualize
BU of 5lz1 by Molmil
Crystal structure of human ACBD3 GOLD domain
Descriptor: Golgi resident protein GCP60
Authors:Klima, M, Boura, E.
Deposit date:2016-09-29
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kobuviral Non-structural 3A Proteins Act as Molecular Harnesses to Hijack the Host ACBD3 Protein.
Structure, 25, 2017
5FBQ
DownloadVisualize
BU of 5fbq by Molmil
PI4KB in complex with Rab11 and the MI358 Inhibitor
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.789 Å)
Cite:PI4KB in complex with Rab11 and the MI358 Inhibitor
To Be Published
5I0N
DownloadVisualize
BU of 5i0n by Molmil
PI4K IIalpha bound to calcium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Phosphatidylinositol 4-kinase type 2-alpha,Lysozyme,Phosphatidylinositol 4-kinase type 2-alpha
Authors:Baumlova, A, Boura, E.
Deposit date:2016-02-04
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:PI4K IIalpha bound to calcium
To Be Published
5FBR
DownloadVisualize
BU of 5fbr by Molmil
PI4KB in complex with Rab11 and the MI359 Inhibitor
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:PI4KB in complex with Rab11 and the MI359 Inhibitor
To Be Published
5FBL
DownloadVisualize
BU of 5fbl by Molmil
PI4KB in complex with Rab11 and the MI356 Inhibitor
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.372 Å)
Cite:PI4KB in complex with Rab11 and the MI356 Inhibitor
To Be Published
5FBV
DownloadVisualize
BU of 5fbv by Molmil
PI4KB in complex with Rab11 and the MI364 Inhibitor
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
Authors:Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
Deposit date:2015-12-14
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.285 Å)
Cite:PI4KB in complex with Rab11 and the MI364 Inhibitor
To Be Published
6S86
DownloadVisualize
BU of 6s86 by Molmil
Human wtSTING in complex with 3'3'-c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Stimulator of Interferon genes
Authors:Smola, M, Boura, E.
Deposit date:2019-07-08
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:No magnesium is needed for binding of the stimulator of interferon genes to cyclic dinucleotides.
Acta Crystallogr.,Sect.F, 75, 2019
6S2A
DownloadVisualize
BU of 6s2a by Molmil
PI PLC mutant H82A
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase
Authors:Eisenreichova, A, Boura, E.
Deposit date:2019-06-20
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:PI PLC mutant H82A
To Be Published
6S27
DownloadVisualize
BU of 6s27 by Molmil
Crystal structure of human wild type STING in complex with 2'3'-cyclic-GMP-2'F-2'dAMP
Descriptor: 2'3'-cyclic-GMP-2'F-2'dAMP, Stimulator of interferon protein
Authors:Smola, M, Boura, E.
Deposit date:2019-06-20
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Enzymatic Preparation of 2'-5',3'-5'-Cyclic Dinucleotides, Their Binding Properties to Stimulator of Interferon Genes Adaptor Protein, and Structure/Activity Correlations.
J.Med.Chem., 62, 2019
8A23
DownloadVisualize
BU of 8a23 by Molmil
Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
Descriptor: (2R,3R,4S,5R)-2-[4-azanyl-5-(2-quinolin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-5-(hydroxymethyl)oxolane-3,4-diol, 2'-O-methyltransferase nsp16, GLYCEROL, ...
Authors:Hanigovsky, M, Krafcikova, P, Klima, M, Boura, E.
Deposit date:2022-06-02
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
To Be Published
7ZKU
DownloadVisualize
BU of 7zku by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'dGMP)
Descriptor: 9-[(1~{S},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R})-8-(6-aminopurin-9-yl)-9-fluoranyl-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]-2-azanyl-3~{H}-purin-6-one, Stimulator of interferon protein
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-04-13
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'dGMP)
To Be Published
7ZWL
DownloadVisualize
BU of 7zwl by Molmil
Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
Descriptor: 9-[(1~{R},6~{R},8~{R},9~{S},10~{R},15~{R},17~{R},18~{S})-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,11,13-tetraoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]purin-6-amine, Stimulator of interferon protein, Ubiquitin-like protein SMT3
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-05-19
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
To Be Published
7ZV0
DownloadVisualize
BU of 7zv0 by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
Descriptor: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-05-13
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
To Be Published
7ZVK
DownloadVisualize
BU of 7zvk by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
Descriptor: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9-fluoranyl-3,12,18-tris(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]-3~{H}-purin-6-one, Stimulator of interferon protein
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-05-16
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
To Be Published
7ZXB
DownloadVisualize
BU of 7zxb by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
Descriptor: 9-[(1~{R},6~{R},8~{R},10~{S},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-18-fluoranyl-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-05-20
Release date:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
To Be Published
8A2X
DownloadVisualize
BU of 8a2x by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
Descriptor: 9-[(1~{R},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
Authors:Klima, M, Smola, M, Boura, E.
Deposit date:2022-06-06
Release date:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
To Be Published
8B07
DownloadVisualize
BU of 8b07 by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin
Descriptor: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, SINEFUNGIN
Authors:Silhan, J, Klima, M, Boura, E.
Deposit date:2022-09-07
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8A5X
DownloadVisualize
BU of 8a5x by Molmil
Crystal structure of phosphatidyl inositol 4-kinase II beta in complex with MM1373
Descriptor: 4-azanyl-7-[3-(hydroxymethyl)phenyl]quinazoline-6-carboxamide, Phosphatidylinositol 4-kinase type 2-beta,Endolysin
Authors:Klima, M, Boura, E.
Deposit date:2022-06-16
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based design and modular synthesis of novel PI4K class II inhibitors bearing a 4-aminoquinazoline scaffold.
Bioorg.Med.Chem.Lett., 76, 2022
7ZIT
DownloadVisualize
BU of 7zit by Molmil
14-3-3 in complex with SARS-COV2 N phospho-peptide
Descriptor: 14-3-3 protein zeta/delta, ACETATE ION, BENZOIC ACID, ...
Authors:Eisenreichova, A, Boura, E.
Deposit date:2022-04-08
Release date:2022-10-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis for SARS-CoV-2 nucleocapsid (N) protein recognition by 14-3-3 proteins.
J.Struct.Biol., 214, 2022
8A2H
DownloadVisualize
BU of 8a2h by Molmil
human STING in complex with 2',3'-cyclic-GMP-7-deazaphenyl-AMP
Descriptor: 2-azanyl-9-[(1~{R},6~{R},8~{R},9~{R},10~{S},15~{R},17~{R},18~{R})-8-(4-azanyl-5-phenyl-pyrrolo[2,3-d]pyrimidin-7-yl)-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, Stimulator of interferon genes protein
Authors:Smola, M, Vavrina, Z, Boura, E, Brynda, J.
Deposit date:2022-06-03
Release date:2022-10-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Design, Synthesis, and Biochemical and Biological Evaluation of Novel 7-Deazapurine Cyclic Dinucleotide Analogues as STING Receptor Agonists.
J.Med.Chem., 65, 2022
7Z5A
DownloadVisualize
BU of 7z5a by Molmil
Crystal structure of the trapped complex of mouse Endonuclease VIII-LIKE 3 (mNEIL3) and hairpin DNA with 5'overhang
Descriptor: DNA (5'-D(P*TP*TP*TP*(PED)P*AP*CP*GP*CP*GP*AP*AP*GP*CP*GP*TP*G)-3'), Endonuclease 8-like 3, ZINC ION
Authors:Silhan, J, Huskova, A.
Deposit date:2022-03-08
Release date:2022-10-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Model of abasic site DNA cross-link repair; from the architecture of NEIL3 DNA binding domains to the X-structure model.
Nucleic Acids Res., 50, 2022
4EXV
DownloadVisualize
BU of 4exv by Molmil
Structure of Kluyveromyces lactis Hsv2p
Descriptor: SULFATE ION, SVP1-like protein 2
Authors:Baskaran, S, Hurley, J.H.
Deposit date:2012-05-01
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Two-Site Recognition of Phosphatidylinositol 3-Phosphate by PROPPINs in Autophagy.
Mol.Cell, 47, 2012

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon