Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7VXE
DownloadVisualize
BU of 7vxe by Molmil
SARS-CoV-2 Kappa variant spike protein in open state
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXC
DownloadVisualize
BU of 7vxc by Molmil
SARS-CoV-2 Kappa variant spike protein in C3 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXI
DownloadVisualize
BU of 7vxi by Molmil
SARS-CoV-2 Kappa variant spike protein in transition state
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXK
DownloadVisualize
BU of 7vxk by Molmil
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C2A state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXB
DownloadVisualize
BU of 7vxb by Molmil
SARS-CoV-2 Kappa variant spike protein in C2b state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2021-12-22
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
7VXM
DownloadVisualize
BU of 7vxm by Molmil
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C3 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-11-12
Release date:2022-01-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
8WCE
DownloadVisualize
BU of 8wce by Molmil
Cryo-EM structure of a protein-RNA complex
Descriptor: MAGNESIUM ION, RNA (31-MER), RNA (66-MER), ...
Authors:Li, Z.
Deposit date:2023-09-11
Release date:2024-05-22
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Molecular mechanism for target RNA recognition and cleavage of Cas13h.
Nucleic Acids Res., 52, 2024
7WEV
DownloadVisualize
BU of 7wev by Molmil
SARS-COV-2 BETA VARIANT SPIKE PROTEIN IN TRANSITION STATE
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2021-12-24
Release date:2022-01-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM.
Nat Commun, 12, 2021
8X3R
DownloadVisualize
BU of 8x3r by Molmil
Crystal structure of human WDR5 in complex with WDR5
Descriptor: WD repeat-containing protein 5
Authors:Liu, Y, Huang, X.
Deposit date:2023-11-14
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The NTE domain of PTEN alpha / beta promotes cancer progression by interacting with WDR5 via its SSSRRSS motif.
Cell Death Dis, 15, 2024
8XFD
DownloadVisualize
BU of 8xfd by Molmil
Crystal structure of pyruvate kinase tetramer in complex with allosteric activator, Mitapivat (MTPV, AG-348)
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Isoform L-type of Pyruvate kinase PKLR, MAGNESIUM ION, ...
Authors:Sun, R, Achour, A.
Deposit date:2023-12-13
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High Resolution Crystal Structure of the Pyruvate Kinase Tetramer in Complex with the Allosteric Activator Mitapivat/AG-348
Crystals, 2024
8X3S
DownloadVisualize
BU of 8x3s by Molmil
Crystal structure of human WDR5 in complex with PTEN
Descriptor: Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, WD repeat-containing protein 5
Authors:Liu, Y, Huang, X, Shang, X.
Deposit date:2023-11-14
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The NTE domain of PTEN alpha / beta promotes cancer progression by interacting with WDR5 via its SSSRRSS motif.
Cell Death Dis, 15, 2024
8Y6U
DownloadVisualize
BU of 8y6u by Molmil
Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Shi, J.
Deposit date:2024-02-03
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:NMR analysis of a loop-bulge structure of UUCGA pentaloop.
Biochem.Biophys.Res.Commun., 691, 2024
8WD8
DownloadVisualize
BU of 8wd8 by Molmil
Cryo-EM structure of TtdAgo-guide DNA-target DNA complex
Descriptor: Argonaute family protein, Guide DNA, MAGNESIUM ION, ...
Authors:Zhuang, L.
Deposit date:2023-09-14
Release date:2024-01-31
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism for target recognition, dimerization, and activation of Pyrococcus furiosus Argonaute.
Mol.Cell, 84, 2024
8HAF
DownloadVisualize
BU of 8haf by Molmil
PTHrP-PTH1R-Gs complex
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, L, Xu, H.E, Yuan, Q.
Deposit date:2022-10-26
Release date:2022-12-21
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Molecular recognition of two endogenous hormones by the human parathyroid hormone receptor-1.
Acta Pharmacol.Sin., 44, 2023
8HA0
DownloadVisualize
BU of 8ha0 by Molmil
Molecular recognition of two endogenous hormones by the human parathyroid hormone receptor-1
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, L, Xu, H.E, Yuan, Q.
Deposit date:2022-10-26
Release date:2022-12-21
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Molecular recognition of two endogenous hormones by the human parathyroid hormone receptor-1.
Acta Pharmacol.Sin., 44, 2023
8HAO
DownloadVisualize
BU of 8hao by Molmil
Human parathyroid hormone receptor-1 dimer
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha, ...
Authors:Zhao, L, Xu, H.E, Yuan, Q.
Deposit date:2022-10-26
Release date:2022-12-21
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Molecular recognition of two endogenous hormones by the human parathyroid hormone receptor-1.
Acta Pharmacol.Sin., 44, 2023
8H4U
DownloadVisualize
BU of 8h4u by Molmil
Cryo-EM structure of a riboendonuclease
Descriptor: CRISPR-associated endonuclease Cas9
Authors:Li, Z, Wang, F.
Deposit date:2022-10-11
Release date:2023-08-30
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Basis for the Ribonuclease Activity of a Thermostable CRISPR-Cas13a from Thermoclostridium caenicola.
J.Mol.Biol., 435, 2023
8H41
DownloadVisualize
BU of 8h41 by Molmil
Crystal structure of a decarboxylase from Trichosporon moniliiforme in complex with o-nitrophenol
Descriptor: MAGNESIUM ION, O-NITROPHENOL, Salicylate decarboxylase
Authors:Gao, J, Zhao, Y.P, Li, Q, Liu, W.D, Sheng, X.
Deposit date:2022-10-09
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A Combined Computational-Experimental Study on the Substrate Binding and Reaction Mechanism of Salicylic Acid Decarboxylase
Catalysts, 12, 2022
8I6K
DownloadVisualize
BU of 8i6k by Molmil
Structure of hMNDA HIN with dsDNA
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ...
Authors:Li, Y.L, Jin, T.C.
Deposit date:2023-01-28
Release date:2023-07-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanism of dsDNA recognition by the hMNDA HIN domain: New insights into the DNA-binding model of a PYHIN protein.
Int.J.Biol.Macromol., 245, 2023
8IUO
DownloadVisualize
BU of 8iuo by Molmil
respiratory syncytial virus nucleocapsid-like assembly
Descriptor: Nucleoprotein, RNA (35-MER)
Authors:Wang, Y, Luo, Y, Ling, X, Luo, B, Jia, G, Dong, H, Su, Z.
Deposit date:2023-03-24
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Cryo-EM structure of the nucleocapsid-like assembly of respiratory syncytial virus.
Signal Transduct Target Ther, 8, 2023
7YG7
DownloadVisualize
BU of 7yg7 by Molmil
Structure of the Spring Viraemia of Carp Virus ribonucleoprotein Complex
Descriptor: Nucleoprotein, RNA (99-mer)
Authors:Liu, B, Wang, Z.X, Yang, T, Yu, D.Q, Ouyang, Q.
Deposit date:2022-07-11
Release date:2023-03-15
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the Spring Viraemia of Carp Virus Ribonucleoprotein Complex Reveals Its Assembly Mechanism and Application in Antiviral Drug Screening.
J.Virol., 97, 2023
7EN0
DownloadVisualize
BU of 7en0 by Molmil
Structure and Activity of SLAC1 Channels for Stomatal Signaling in Leaves
Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, SLow Anion Channel 1, SPHINGOSINE
Authors:Deng, Y, Kashtoh, H, Wang, Q, Zhen, G, Li, Q, Tang, L, Gao, H, Zhang, C, Qin, L, Su, M, Li, F, Huang, X, Wang, Y, Xie, Q, Clarke, O.B, Hendrickson, W.A, Chen, Y.
Deposit date:2021-04-15
Release date:2021-05-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure and activity of SLAC1 channels for stomatal signaling in leaves.
Proc.Natl.Acad.Sci.USA, 118, 2021
7VUZ
DownloadVisualize
BU of 7vuz by Molmil
Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with PAMP-12, state2
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, Y, Yang, F.
Deposit date:2021-11-04
Release date:2021-12-01
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure, function and pharmacology of human itch receptor complexes.
Nature, 600, 2021
7VV4
DownloadVisualize
BU of 7vv4 by Molmil
Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with linear cortistatin-14, local
Descriptor: CHOLESTEROL, Mas-related G-protein coupled receptor member X2, circular cortistatin-14
Authors:Li, Y, Yang, F.
Deposit date:2021-11-04
Release date:2021-12-01
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure, function and pharmacology of human itch receptor complexes.
Nature, 600, 2021
7VDM
DownloadVisualize
BU of 7vdm by Molmil
Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with substance P
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, Y, Yang, F.
Deposit date:2021-09-07
Release date:2021-12-01
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structure, function and pharmacology of human itch receptor complexes.
Nature, 600, 2021

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon