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3RT4
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BU of 3rt4 by Molmil
Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of Proinflammatory Cytokines by Camel Peptidoglycan Recognition Protein
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, L(+)-TARTARIC ACID, Peptidoglycan recognition protein 1
Authors:Sharma, P, Dube, D, Singh, A, Mishra, B, Singh, N, Sinha, M, Dey, S, Kaur, P, Mitra, D.K, Sharma, S, Singh, T.P.
Deposit date:2011-05-03
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of Proinflammatory Cytokines by Camel Peptidoglycan Recognition Protein.
J.Biol.Chem., 286, 2011
1TK4
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BU of 1tk4 by Molmil
Crystal structure of russells viper phospholipase A2 in complex with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, SULFATE ION, Tetrapeptide Ala-Ile-Arg-Ser
Authors:Singh, N, Bilgrami, S, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Kaur, P, Singh, T.P.
Deposit date:2004-06-08
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of russells viper phospholipase A2 with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution
TO BE PUBLISHED
1SQZ
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BU of 1sqz by Molmil
Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between Group II Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
Descriptor: Phospholipase A2, SULFATE ION, synthetic peptide
Authors:Singh, N, Prem Kumar, R, Somvanshi, R.K, Bilgrami, S, Ethayathulla, A.S, Sharma, S, Dey, S, Singh, T.P.
Deposit date:2004-03-22
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between GroupII Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
To be Published
3G8F
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BU of 3g8f by Molmil
Crystal structure of the complex formed between a group II phospholipase A2 and designed peptide inhibitor carbobenzoxy-dehydro-val-ala-arg-ser at 1.2 A resolution
Descriptor: PHQ VAL ALA ARG SER peptide, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
Authors:Singh, N, Kaur, P, Prem Kumar, R, Somvanshi, R.K, Perbandt, M, Betzel, C, Dey, S, Sharma, S, Singh, T.P.
Deposit date:2009-02-12
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal Structure of the Complex Formed between a Group II Phospholipase A2 and Designed Peptide Inhibitor Carbobenzoxy-Dehydro-Val-Ala-Arg-Ser at 1.2 A Resolution
To be Published
4GFY
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BU of 4gfy by Molmil
Design of peptide inhibitors of phospholipase A2: crystal Structure of phospholipase A2 complexed with a designed tetrapeptide Val - Ilu- Ala - Lys at 2.7 A resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, SULFATE ION, VIAK
Authors:Shukla, P.K, Sinha, M, Dey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-08-04
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design of peptide inhibitors of phospholipase A2: crystal Structure of phospholipase A2 complexed with a designed tetrapeptide Val - Ilu- Ala - Lys at 2.7 A resolution
To be Published
4GLD
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BU of 4gld by Molmil
Crystal Structure of the complex of type II phospholipase A2 with a designed peptide inhibitor Phe - Leu - Ala - Tyr - Lys at 1.69 A resolution
Descriptor: ACETATE ION, FLAYK, Phospholipase A2 VRV-PL-VIIIa, ...
Authors:Shukla, P.K, Sinha, M, Dey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-08-14
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal Structure of the complex of type II phospholipase A2 with a designed peptide inhibitor Phe - Leu - Ala - Tyr - Lys at 1.69 A resolution
To be Published
4FGA
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BU of 4fga by Molmil
Design of peptide inhibitors of group II phospholipase A2: Crystal structure of the complex of phospholipsae A2 with a designed tripeptide, Ala- Tyr- Lys at 2.3 A resolution
Descriptor: AYK, Phospholipase A2 VRV-PL-VIIIa
Authors:Shukla, P.K, Sinha, M, Dey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-06-04
Release date:2012-06-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of peptide inhibitors of group II phospholipase A2: Crystal structure of the complex of phospholipsae A2 with a designed tripeptide, Ala- Tyr- Lys at 2.3 A resolution
To be Published
1TG1
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BU of 1tg1 by Molmil
Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor PHQ-Leu-Val-Arg-Tyr at 1.2A resolution
Descriptor: ACETIC ACID, METHANOL, Phospholipase A2, ...
Authors:Singh, N, Kaur, P, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Singh, T.P.
Deposit date:2004-05-28
Release date:2004-06-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor Cbz-dehydro-Leu-Val-Arg-Tyr at 1.2A resolution
To be Published
1SKG
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BU of 1skg by Molmil
Structure-based rational drug design: Crystal structure of the complex formed between Phospholipase A2 and a pentapeptide Val-Ala-Phe-Arg-Ser
Descriptor: METHANOL, Phospholipase A2, SULFATE ION, ...
Authors:Ethayathulla, A.S, Singh, N, Sharma, S, Makker, J, Dey, S, Perbandt, M, Betzel, C, Singh, T.P.
Deposit date:2004-03-04
Release date:2004-04-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structure-based rational drug design: Crystal structure of the complex formed between Phospholipase A2 and a pentapeptide Val-Ala-Phe-Arg-Ser
To be Published
1T37
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BU of 1t37 by Molmil
Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between group I phospholipase A2 and a designed pentapeptide Leu-Ala-Ile-Tyr-Ser at 2.6A resolution
Descriptor: ACETATE ION, Phospholipase A2 isoform 3, Synthetic peptide
Authors:Singh, R.K, Singh, N, Jabeen, T, Makker, J, Sharma, S, Dey, S, Singh, T.P.
Deposit date:2004-04-25
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of group I PLA2 with a group II-specific peptide Leu-Ala-Ile-Tyr-Ser (LAIYS) at 2.6 A resolution.
J.Drug Target., 13, 2005
1TJK
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BU of 1tjk by Molmil
Crystal structure of the complex formed between group II phospholipase A2 with a designed pentapeptide, Phe- Leu- Ser- Thr- Lys at 1.2 A resolution
Descriptor: Phospholipase A2, SULFATE ION, synthetic peptide
Authors:Singh, N, Jabeen, T, Somvanshi, R.K, Sharma, S, Perbandt, M, Dey, S, Betzel, C, Singh, T.P.
Deposit date:2004-06-06
Release date:2004-06-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of the complex formed between group II phospholipase A2 with a designed pentapeptide, Phe - Leu - Ser - Thr - Lys at 1.2 A resolution
To be Published
1TDV
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BU of 1tdv by Molmil
Non-specific binding to phospholipase A2:Crystal structure of the complex of PLA2 with a designed peptide Tyr-Trp-Ala-Ala-Ala-Ala at 1.7A resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, SULFATE ION, YWAAAA
Authors:Singh, N, Jabeen, T, Ethayathulla, A.S, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Singh, T.P.
Deposit date:2004-05-24
Release date:2004-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Non-specific binding to phospholipase A2:Crystal structure of the complex of PLA2 with a designed peptide Tyr-Trp-Ala-Ala-Ala-Ala at 1.7A resolution
to be published
1TG4
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BU of 1tg4 by Molmil
Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution
Descriptor: FLAYK peptide, Phospholipase A2, SULFATE ION
Authors:Singh, N, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Ethayathulla, A.S, Singh, T.P.
Deposit date:2004-05-28
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution
TO BE PUBLISHED
1TJ9
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BU of 1tj9 by Molmil
Structure of the complexed formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution
Descriptor: ACETIC ACID, Phospholipase A2, SULFATE ION, ...
Authors:Singh, N, Ethayathulla, A.S, K Somvanshi, R, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Kaur, P, Singh, T.P.
Deposit date:2004-06-03
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structure of the complex formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution
TO BE PUBLISHED
2DQK
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BU of 2dqk by Molmil
Crystal structure of the complex of proteinase K with a specific lactoferrin peptide Val-Leu-Leu-His at 1.93 A resolution
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K, ...
Authors:Singh, A.K, Singh, N, Sharma, S, Dey, S, Bhushan, A, Singh, T.P.
Deposit date:2006-05-29
Release date:2006-06-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of the complex of proteinase K with a specific lactoferrin peptide Val-Leu-Leu-His at 1.93 resolution
To be Published
2DO2
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BU of 2do2 by Molmil
Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between a group II Cys 49 phospholipase A2 and a designed pentapeptide Ala-Leu-Ala-Ser-Lys at 2.6A resolution
Descriptor: Ala-Leu-Ala-Ser-Lys, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
Authors:Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
Deposit date:2006-04-27
Release date:2006-05-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between a group II Cys 49 phospholipase A2 and a designed pentapeptide Ala-Leu-Ala-Ser-Lys at 2.6A resolution
To be Published
2AOS
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BU of 2aos by Molmil
Protein-protein Interactions of protective signalling factor: Crystal structure of ternary complex involving signalling protein from goat (SPG-40), tetrasaccharide and a tripeptide Trp-pro-Trp at 2.9 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Signaling protein from goat, SPG-40, ...
Authors:Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Somvanshi, R.K, Singh, N, Sharma, S, Dey, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2005-08-14
Release date:2005-09-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein-protein Interactions of protective signalling factor: Crystal structure of ternary complex involving signalling protein from goat (SPG-40), tetrasaccharide and a tripeptide Trp-pro-Trp at 2.9 A resolution
To be Published
2PQ2
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BU of 2pq2 by Molmil
Structure of serine proteinase K complex with a highly flexible hydrophobic peptide at 1.8A resolution
Descriptor: CALCIUM ION, GALAG peptide, NITRATE ION, ...
Authors:Ethayathulla, A.S, Singh, A.K, Singh, N, Sharma, S, Sinha, M, Somvanshi, R.K, Kaur, P, Dey, S, Srinivasan, A, Singh, T.P.
Deposit date:2007-05-01
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of serine proteinase K complex with a highly flexible hydrophobic peptide at 1.8A resolution
To be Published
8H53
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BU of 8h53 by Molmil
Human asparaginyl-tRNA synthetase in complex with asparagine-AMP
Descriptor: 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, Asparagine--tRNA ligase, cytoplasmic, ...
Authors:Park, J.S, Han, B.W.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
2G41
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BU of 2g41 by Molmil
Crystal structure of the complex of sheep signalling glycoprotein with chitin trimer at 3.0A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SIGNAL PROCESSING PROTEIN, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Srivastava, D.B, Ethayathulla, A.S, Kumar, J, Bhushan, A, Sharma, S, Singh, T.P.
Deposit date:2006-02-21
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Carbohydrate binding properties and carbohydrate induced conformational switch in sheep secretory glycoprotein (SPS-40): crystal structures of four complexes of SPS-40 with chitin-like oligosaccharides
J.Struct.Biol., 158, 2007
1OXG
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BU of 1oxg by Molmil
Crystal structure of a complex formed between organic solvent treated bovine alpha-chymotrypsin and its autocatalytically produced highly potent 14-residue peptide at 2.2 resolution
Descriptor: Chymotrypsinogen A, SULFATE ION
Authors:Singh, N, Jabeen, T, Sharma, S, Roy, I, Gupta, M.N, Bilgrami, S, Singh, T.P.
Deposit date:2003-04-02
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Detection of native peptides as potent inhibitors of enzymes. Crystal structure of the complex formed between treated bovine alpha-chymotrypsin and an autocatalytically produced fragment, IIe-Val-Asn-Gly-Glu-Glu-Ala-Val-Pro-Gly-Ser-Trp-Pro-Trp, at 2.2 angstroms resolution.
Febs J., 272, 2005
8P49
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BU of 8p49 by Molmil
Uncharacterized Q8U0N8 protein from Pyrococcus furiosus
Descriptor: Q8U0N8 protein
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-05-19
Release date:2023-11-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8Q70
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BU of 8q70 by Molmil
tRNA pseudouridine synthase A homodimer
Descriptor: CHLORIDE ION, MAGNESIUM ION, tRNA pseudouridine synthase A
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-08-15
Release date:2023-11-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
1Q7A
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BU of 1q7a by Molmil
Crystal structure of the complex formed between russell's viper phospholipase A2 and an antiinflammatory agent oxyphenbutazone at 1.6A resolution
Descriptor: 4-BUTYL-1-(4-HYDROXYPHENYL)-2-PHENYLPYRAZOLIDINE-3,5-DIONE, METHANOL, Phospholipase A2 VRV-PL-VIIIa, ...
Authors:Singh, N, Jabeen, T, Sharma, S, Singh, T.P.
Deposit date:2003-08-17
Release date:2004-05-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phospholipase A2 as a target protein for nonsteroidal anti-inflammatory drugs (NSAIDS): crystal structure of the complex formed between phospholipase A2 and oxyphenbutazone at 1.6 A resolution.
Biochemistry, 43, 2004
7ROS
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BU of 7ros by Molmil
Plasmodium falciparum tyrosyl-tRNA synthetase in complex with ML901-Tyr
Descriptor: CHLORIDE ION, MAGNESIUM ION, Tyrosine--tRNA ligase, ...
Authors:Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
Deposit date:2021-08-02
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Reaction hijacking of tyrosine tRNA synthetase as a new whole-of-life-cycle antimalarial strategy.
Science, 376, 2022

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