Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2LA5
DownloadVisualize
BU of 2la5 by Molmil
RNA Duplex-Quadruplex Junction Complex with FMRP RGG peptide
Descriptor: Fragile X mental retardation 1 protein, RNA (36-MER)
Authors:Phan, A, Kuryavyi, V, Darnell, J, Serganov, A, Majumdar, A, Ilin, S, Darnell, R, Patel, D.
Deposit date:2011-03-03
Release date:2011-06-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction.
Nat.Struct.Mol.Biol., 18, 2011
6U2S
DownloadVisualize
BU of 6u2s by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Bi-component leukocidin LukED subunit D, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-20
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U33
DownloadVisualize
BU of 6u33 by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Bi-component leukocidin LukED subunit D, NICKEL (II) ION
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-21
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6TXT
DownloadVisualize
BU of 6txt by Molmil
Major subunit ComGC from S. sanguinis Com pseudopili
Descriptor: Competence pilin-like protein ComGC
Authors:Sheppard, D, Berry, J.L, Matthews, S.J, Pelicic, V.
Deposit date:2020-01-14
Release date:2020-04-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold.
J.Biol.Chem., 295, 2020
1WDL
DownloadVisualize
BU of 1wdl by Molmil
fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4)
Descriptor: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, ...
Authors:Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
Deposit date:2004-05-17
Release date:2004-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004
3V64
DownloadVisualize
BU of 3v64 by Molmil
Crystal Structure of agrin and LRP4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Low-density lipoprotein receptor-related protein 4, ...
Authors:Zong, Y, Zhang, B, Gu, S, Lee, K, Zhou, J, Yao, G, Figueiedo, D, Perry, K, Mei, L, Jin, R.
Deposit date:2011-12-18
Release date:2012-04-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of agrin-LRP4-MuSK signaling.
Genes Dev., 26, 2012
6U5B
DownloadVisualize
BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Descriptor: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
1WH7
DownloadVisualize
BU of 1wh7 by Molmil
Solution structure of homeobox domain of Arabidopsis thaliana hypothetical protein F22K18.140
Descriptor: ZF-HD homeobox family protein
Authors:Kaneno, D, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of homeobox domain of Arabidopsis thaliana hypothetical protein F22K18.140
To be Published
6U8K
DownloadVisualize
BU of 6u8k by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3
Descriptor: Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3
Authors:Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
Deposit date:2019-09-05
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
6U1T
DownloadVisualize
BU of 6u1t by Molmil
Crystal structure of anti-Nipah virus (NiV) F 5B3 antibody Fab fragment
Descriptor: CHLORIDE ION, antigen-binding (Fab) fragment, heavy chain, ...
Authors:Dang, H.V, Chan, Y.P, Park, Y.J, Snijder, J, Da Silva, S.C, Vu, B, Yan, L, Feng, Y.R, Rockx, B, Geisbert, T, Mire, C, Mire, C.E, BBroder, C.C, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-16
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:An antibody against the F glycoprotein inhibits Nipah and Hendra virus infections.
Nat.Struct.Mol.Biol., 26, 2019
1WRR
DownloadVisualize
BU of 1wrr by Molmil
Urate oxidase from aspergillus flavus complexed with 5-amino 6-nitro uracil
Descriptor: 5-AMINO-6-NITROPYRIMIDINE-2,4(1H,3H)-DIONE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-10-27
Release date:2005-03-22
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
1WOC
DownloadVisualize
BU of 1woc by Molmil
Crystal structure of PriB
Descriptor: Primosomal replication protein n
Authors:Shioi, S, Ose, T, Maenaka, K, Abe, Y, Kohda, D, Katayama, T, Ueda, T.
Deposit date:2004-08-13
Release date:2005-01-25
Last modified:2012-12-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site
Biochem.Biophys.Res.Commun., 326, 2005
1WS3
DownloadVisualize
BU of 1ws3 by Molmil
Urate oxidase from aspergillus flavus complexed with uracil
Descriptor: URACIL, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-10-29
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
6U5H
DownloadVisualize
BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
Descriptor: Probable bacteriophage protein Pyocin R2
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
7SCI
DownloadVisualize
BU of 7sci by Molmil
AM0627 metallopeptidase from Akkermansia muciniphila
Descriptor: CHLORIDE ION, FORMIC ACID, Peptidase M60 domain-containing protein, ...
Authors:Fernandez, D, Bertozzi, C.R, Shon, D.J.
Deposit date:2021-09-28
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided mutagenesis of a mucin-selective metalloprotease from Akkermansia muciniphila alters substrate preferences.
J.Biol.Chem., 298, 2022
3V9K
DownloadVisualize
BU of 3v9k by Molmil
Crystal structure of mouse 1-pyrroline-5-carboxylate dehydrogenase complexed with the product glutamate
Descriptor: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial, GLUTAMIC ACID, ...
Authors:Tanner, J.J, Srivastava, D.
Deposit date:2011-12-27
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:The Three-Dimensional Structural Basis of Type II Hyperprolinemia.
J.Mol.Biol., 420, 2012
4O9Y
DownloadVisualize
BU of 4o9y by Molmil
Crystal Structure of TcdA1
Descriptor: TcdA1
Authors:Meusch, D, Gatsogiannis, C, Efremov, R.G, Lang, A.E, Hofnagel, O, Vetter, I.R, Aktories, K, Raunser, S.
Deposit date:2014-01-03
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Mechanism of Tc toxin action revealed in molecular detail.
Nature, 508, 2014
7S5B
DownloadVisualize
BU of 7s5b by Molmil
Unbound State of a De novo designed Protein Binder to the Human Interleukin-7 Receptor
Descriptor: Miniprotein Binder
Authors:Walsh, S.T.R, Cao, L, Baker, D.
Deposit date:2021-09-10
Release date:2022-05-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of protein-binding proteins from the target structure alone.
Nature, 605, 2022
6TY4
DownloadVisualize
BU of 6ty4 by Molmil
FAK structure with AMP-PNP from single particle analysis of 2D crystals
Descriptor: Focal adhesion kinase 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Acebron, I, Righetto, R, Biyani, N, Chami, M, Boskovic, J, Stahlberg, H, Lietha, D.
Deposit date:2020-01-15
Release date:2020-08-19
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (5.96 Å)
Cite:Structural basis of Focal Adhesion Kinase activation on lipid membranes.
Embo J., 39, 2020
6UBR
DownloadVisualize
BU of 6ubr by Molmil
Crystal structure of D678A GoxA bound to glycine at pH 7.5
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCINE, MAGNESIUM ION, ...
Authors:Yukl, E.T, Avalos, D.
Deposit date:2019-09-12
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Kinetic and structural evidence that Asp-678 plays multiple roles in catalysis by the quinoprotein glycine oxidase.
J.Biol.Chem., 294, 2019
6RHZ
DownloadVisualize
BU of 6rhz by Molmil
Structure of a minimal photosystem I from a green alga
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Perez Boerema, A, Klaiman, D, Caspy, I, Netzer-El, S.Y, Amunts, A, Nelson, N.
Deposit date:2019-04-23
Release date:2020-02-19
Last modified:2020-03-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of a minimal photosystem I from the green alga Dunaliella salina.
Nat.Plants, 6, 2020
6UFA
DownloadVisualize
BU of 6ufa by Molmil
S4 symmetric peptide design number 1, Tim zinc-bound form
Descriptor: S4-1, Tim, Zinc-bound form, ...
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-24
Release date:2020-12-02
Method:X-RAY DIFFRACTION (0.77 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
2LJW
DownloadVisualize
BU of 2ljw by Molmil
Solution NMR structure of Alr2454 protein from Nostoc sp. strain PCC 7120, Northeast Structural Genomics Consortium Target NsR264
Descriptor: Alr2454 protein
Authors:Aramini, J.M, Lee, D, Ciccosanti, C, Janjua, H, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-09-29
Release date:2011-10-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of Alr2454 from Nostoc sp. PCC 7120, the first structural representative of Pfam domain family PF11267.
J.Struct.Funct.Genom., 13, 2012
6U3T
DownloadVisualize
BU of 6u3t by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
Descriptor: Alpha-hemolysin, SULFATE ION, fos-choline-14
Authors:Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
Deposit date:2019-08-22
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
3V9L
DownloadVisualize
BU of 3v9l by Molmil
Crystal structure of mouse 1-pyrroline-5-carboxylate dehydrogenase complexed with NAD+
Descriptor: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial, GLYCEROL, ...
Authors:Tanner, J.J, Srivastava, D.
Deposit date:2011-12-27
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:The Three-Dimensional Structural Basis of Type II Hyperprolinemia.
J.Mol.Biol., 420, 2012

224004

數據於2024-08-21公開中

PDB statisticsPDBj update infoContact PDBjnumon