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6PWW
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BU of 6pww by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
Deposit date:2019-07-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWX
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BU of 6pwx by Molmil
Cryo-EM structure of RbBP5 bound to the nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
Deposit date:2019-07-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
9ERJ
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BU of 9erj by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential Ferredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
9ERL
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BU of 9erl by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii in apo state
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
7LAW
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BU of 7law by Molmil
crystal structure of GITR complex with GITR-L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 18, Tumor necrosis factor receptor superfamily member 18
Authors:Longenecker, K.L, Rogers, B, Bigelow, L, Judge, R.A, Alvarez, H.
Deposit date:2021-01-07
Release date:2022-03-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.752 Å)
Cite:An anti-PD-1-GITR-L bispecific agonist induces GITR clustering-mediated T cell activation for cancer immunotherapy.
Nat Cancer, 3, 2022
9HCJ
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BU of 9hcj by Molmil
D. discoideum nuclear pore complex
Descriptor: ELYS-like domain-containing protein, NDC1, Nuclear pore complex protein, ...
Authors:Obarska-Kosinska, A, Hoffmann, P.C, Beck, M.
Deposit date:2024-11-10
Release date:2024-12-25
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (30 Å)
Cite:Nuclear pore permeability and fluid flow are modulated by its dilation state.
Mol.Cell, 85, 2025
9ERK
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BU of 9erk by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii reduced with low potential ferredoxin (consensus map)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
9ERI
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BU of 9eri by Molmil
Cryo-EM structure of sodium pumping Rnf complex from Acetobacterium woodii bound to NADH
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Kumar, A, Schuller, J.M.
Deposit date:2024-03-23
Release date:2025-03-05
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.
Nat Commun, 16, 2025
4QBS
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BU of 4qbs by Molmil
Crystal structure of DNMT3a ADD domain E545R mutant bound to H3T3ph peptide
Descriptor: DNA (cytosine-5)-methyltransferase 3A, Histone H3, SULFATE ION, ...
Authors:Wang, H, Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
6XJF
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BU of 6xjf by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha (SeMet labeled protein)
Descriptor: Transcription factor E
Authors:Murakami, K.S, Jun, S.H.
Deposit date:2020-06-23
Release date:2020-07-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
4QBR
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BU of 4qbr by Molmil
Crystal structure of DNMT3a ADD domain G550D mutant bound to H3 peptide
Descriptor: DNA (cytosine-5)-methyltransferase 3A, Histone H3, ZINC ION
Authors:Wang, H, Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
1LCP
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BU of 1lcp by Molmil
BOVINE LENS LEUCINE AMINOPEPTIDASE COMPLEXED WITH L-LEUCINE PHOSPHONIC ACID
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, LEUCINE AMINOPEPTIDASE, LEUCINE PHOSPHONIC ACID, ...
Authors:Straeter, N, Lipscomb, W.N.
Deposit date:1995-05-12
Release date:1995-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Transition state analogue L-leucinephosphonic acid bound to bovine lens leucine aminopeptidase: X-ray structure at 1.65 A resolution in a new crystal form.
Biochemistry, 34, 1995
8HFB
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BU of 8hfb by Molmil
Evolved variant of quercetin 2,4-dioxygenase from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NICKEL (II) ION, ...
Authors:Eom, H, Song, W.J.
Deposit date:2022-11-10
Release date:2023-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Underlying Role of Hydrophobic Environments in Tuning Metal Elements for Efficient Enzyme Catalysis.
J.Am.Chem.Soc., 145, 2023
6JQ7
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BU of 6jq7 by Molmil
The ligand-free structure of human PPARgamma LBD in the presence of the SRC-1 coactivator peptide
Descriptor: 16-mer peptide from Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y, Han, B.W.
Deposit date:2019-03-29
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
6XDM
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BU of 6xdm by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ARYL KETONE INHIBITOR
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Histone deacetylase 2, ...
Authors:Klein, D.J, Liu, J.
Deposit date:2020-06-11
Release date:2020-07-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Selective Class I HDAC Inhibitors Based on Aryl Ketone Zinc Binding Induce HIV-1 Protein for Clearance.
Acs Med.Chem.Lett., 11, 2020
6IJR
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BU of 6ijr by Molmil
Human PPARgamma ligand binding domain complexed with SB1495
Descriptor: 16 mer peptide from Nuclear receptor coactivator 1, N-{[3-({[(1S,2R)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y, Han, B.W.
Deposit date:2018-10-11
Release date:2019-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
6IJS
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BU of 6ijs by Molmil
Human PPARgamma ligand binding domain complexed with SB1494
Descriptor: 16-mer peptide from Nuclear receptor coactivator 1, N-{[3-({[(1R,2S)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Jang, J.Y, Han, B.W.
Deposit date:2018-10-11
Release date:2019-10-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
9BDQ
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BU of 9bdq by Molmil
The structure of NiV L-P complex
Descriptor: Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION
Authors:Hu, S, Yang, P, Yu, Z, Abraham, J.
Deposit date:2024-04-12
Release date:2025-01-29
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:Structural and functional analysis of the Nipah virus polymerase complex.
Cell, 188, 2025
3KPE
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BU of 3kpe by Molmil
Solution structure of the respiratory syncytial virus (RSV)six-helix bundle complexed with TMC353121, a small-moleucule inhibitor of RSV
Descriptor: 2-[[6-[[[2-(3-hydroxypropyl)-5-methylphenyl]amino]methyl]-2-[[3-(4-morpholinyl)propyl]amino]-1H-benzimidazol-1-yl]methyl]-6-methyl-3-pyridinol, Fusion glycoprotein F0, TETRAETHYLENE GLYCOL
Authors:Roymans, D, De Bondt, H, Arnoult, E, Cummings, M.D, Van Vlijmen, H, Andries, K.
Deposit date:2009-11-16
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Binding of a potent small-molecule inhibitor of six-helix bundle formation requires interactions with both heptad-repeats of the RSV fusion protein.
Proc.Natl.Acad.Sci.USA, 107, 2010
5YI5
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BU of 5yi5 by Molmil
human ferritin mutant - E-helix deletion
Descriptor: Ferritin heavy chain
Authors:Lee, S.G, Yoon, H.R, Ahn, B.J, Jeong, H, Hyun, J, Jung, Y, Kim, H.
Deposit date:2017-10-02
Release date:2018-02-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Four-fold Channel-Nicked Human Ferritin Nanocages for Active Drug Loading and pH-Responsive Drug Release
Angew. Chem. Int. Ed. Engl., 57, 2018
7M72
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BU of 7m72 by Molmil
MHC-like protein complex structure
Descriptor: (3R)-N-[(2S,3R)-1-(alpha-D-galactopyranosyloxy)-3-hydroxy-15-methylhexadecan-2-yl]-3-hydroxyheptadecanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Thirunavukkarasu, P, Le Nours, J, Rossjohn, J.
Deposit date:2021-03-26
Release date:2021-11-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Host immunomodulatory lipids created by symbionts from dietary amino acids.
Nature, 600, 2021
7CM0
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BU of 7cm0 by Molmil
Crystal structure of a glutaminyl cyclase in complex with NHV-1009
Descriptor: 1-(cyclopentylmethyl)-1-[3-methoxy-4-(2-morpholin-4-ylethoxy)phenyl]-3-[3-(5-methylimidazol-1-yl)propyl]urea, Glutaminyl-peptide cyclotransferase, ZINC ION
Authors:Lee, J.W, Song, J.Y, Jang, T.H, Ha, J.H.
Deposit date:2020-07-23
Release date:2021-12-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of highly potent human glutaminyl cyclase (QC) inhibitors as anti-Alzheimer's agents by the combination of pharmacophore-based and structure-based design.
Eur.J.Med.Chem., 226, 2021
2K21
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BU of 2k21 by Molmil
NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C
Descriptor: Potassium voltage-gated channel subfamily E member
Authors:Kang, C, Tian, C, Sonnichsen, F.D, Smith, J.A, Meiler, J, George, A.L, Vanoye, C.G, Sanders, C.R, Kim, H.
Deposit date:2008-03-19
Release date:2008-12-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel.
Biochemistry, 47, 2008
2LYQ
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BU of 2lyq by Molmil
NOE-based 3D structure of the monomeric intermediate of CylR2 at 262K (-11 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2KDC
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BU of 2kdc by Molmil
NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles
Descriptor: Diacylglycerol kinase
Authors:Van Horn, W.D, Kim, H, Ellis, C.D, Hadziselimovic, A, Sulistijo, E.S, Karra, M.D, Tian, C, Sonnichsen, F.D, Sanders, C.R.
Deposit date:2009-01-06
Release date:2009-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution nuclear magnetic resonance structure of membrane-integral diacylglycerol kinase
Science, 324, 2009

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數據於2025-07-09公開中

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