Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6KJJ
DownloadVisualize
BU of 6kjj by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
Descriptor: 4-(2-acetamidoethylsulfanyl)-4-oxidanylidene-butanoic acid, Putative beta-lactamase
Authors:Xiao, F, Dong, S, Feng, Y, Li, W.
Deposit date:2019-07-22
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6KJR
DownloadVisualize
BU of 6kjr by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
Descriptor: 4-[[(3~{E},5~{Z},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-14,16-bis(oxidanyl)-2-oxidanylidene-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-8-yl]oxy]-4-oxidanylidene-butanoic acid, Putative beta-lactamase
Authors:Xiao, F, Dong, S, Feng, Y, Li, W.
Deposit date:2019-07-23
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.361 Å)
Cite:Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
6A59
DownloadVisualize
BU of 6a59 by Molmil
Structure of histone demethylase REF6 at 1.8A
Descriptor: Lysine-specific demethylase REF6, ZINC ION
Authors:Tian, Z, Chen, Z.
Deposit date:2018-06-22
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms.
Cell Discov, 6, 2020
6A71
DownloadVisualize
BU of 6a71 by Molmil
Crystal Structure of Human ATP7B and TM Complex
Descriptor: ATP7B protein, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Chen, W.B.
Deposit date:2018-06-30
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Tetrathiomolybdate induces dimerization of the metal-binding domain of ATPase and inhibits platination of the protein.
Nat Commun, 10, 2019
7YF1
DownloadVisualize
BU of 7yf1 by Molmil
Structure of FABP at 1.7 Angstroms resolution.
Descriptor: Fatty acid-binding protein, heart, PALMITIC ACID
Authors:Liu, Y.h, Wang, L.l.
Deposit date:2022-07-07
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Insights into Mouse H-FABP.
Life, 12, 2022
6KJP
DownloadVisualize
BU of 6kjp by Molmil
Functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors
Descriptor: (3~{Z},5~{E},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z},19~{E},24~{R})-24-methyl-8,14,16-tris(oxidanyl)-1-oxacyclotetracosa-3,5,9,11,17,19-hexaen-2-one, Putative beta-lactamase, SULFATE ION
Authors:Xiao, F, Dong, S, Feng, Y, Li, W.
Deposit date:2019-07-23
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural Basis of Specificity for Carboxyl-Terminated Acyl Donors in a Bacterial Acyltransferase.
J.Am.Chem.Soc., 142, 2020
3V8S
DownloadVisualize
BU of 3v8s by Molmil
Human RHO-ASSOCIATED PROTEIN KINASE 1 (ROCK 1) IN COMPLEX WITH INDAZOLE DERIVATIVE (COMPOUND 18)
Descriptor: 1-(1H-indazol-5-yl)-3-(2-phenylethyl)urea, Rho-associated protein kinase 1
Authors:Martin, M.P, Zhu, J.-Yi, Schonbrunn, E.
Deposit date:2011-12-23
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.286 Å)
Cite:Fragment-based and structure-guided discovery and optimization of rho kinase inhibitors.
J.Med.Chem., 55, 2012
6KBU
DownloadVisualize
BU of 6kbu by Molmil
Crystal structure of yedK
Descriptor: GLYCEROL, SOS response-associated protein
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-06-26
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KIJ
DownloadVisualize
BU of 6kij by Molmil
Crystal structure of yedK with ssDNA containing an abasic site
Descriptor: DNA (5'-D(*GP*AP*TP*TP*CP*GP*TP*CP*G)-3'), GLYCEROL, PENTANE-3,4-DIOL-5-PHOSPHATE, ...
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-07-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KBZ
DownloadVisualize
BU of 6kbz by Molmil
Crystal structure of yedK with ssDNA containing a tetrahydrofuran abasic site
Descriptor: 5'-D (*CP*GP*GP*TP* (3DR) P*GP*AP*TP*TP*C)-3', MAGNESIUM ION, SOS response-associated protein
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-06-26
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KBX
DownloadVisualize
BU of 6kbx by Molmil
Crystal structure of yedK in complex with ssDNA containing abasic site
Descriptor: DNA 5'-D (*CP*GP*GP*TP* (PED)P*GP*AP*TP*TP*C)-3', SOS response-associated protein
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-06-26
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.221 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KBS
DownloadVisualize
BU of 6kbs by Molmil
Crystal structure of yedK in complex with ssDNA
Descriptor: DNA (5'-D(*CP*GP*GP*TP*CP*GP*AP*TP*TP*C)-3'), SOS response-associated protein
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-06-26
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
6KCQ
DownloadVisualize
BU of 6kcq by Molmil
Crystal structure of yedK with ssDNA containing an abasic site
Descriptor: DNA (5'-D(P*AP*AP*AP*(PED)P*AP*A)-3'), SOS response-associated protein
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-06-28
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK.
Nucleic Acids Res., 47, 2019
7VIJ
DownloadVisualize
BU of 7vij by Molmil
Crystal structure of USP7-HUBL domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7
Authors:Feng, N, Zeng, K.W.
Deposit date:2021-09-27
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Neuroinflammation inhibition by small-molecule targeting USP7 noncatalytic domain for neurodegenerative disease therapy.
Sci Adv, 8, 2022
8GRD
DownloadVisualize
BU of 8grd by Molmil
Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human IDH3 in complex with ADP and Mg
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, ...
Authors:Chen, X, Sun, P, Ding, J.
Deposit date:2022-09-01
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GS5
DownloadVisualize
BU of 8gs5 by Molmil
Crystal structure of a constitutively active mutant of human IDH3 holoenzyme in apo form
Descriptor: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, Isocitrate dehydrogenase [NAD] subunit gamma, ...
Authors:Sun, P, Chen, X, Ding, J.
Deposit date:2022-09-04
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.486 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GRG
DownloadVisualize
BU of 8grg by Molmil
Crystal structure of a constitutively active mutant of the alpha gamma heterodimer of human IDH3
Descriptor: Human IDH3 alpha subunit, Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial
Authors:Sun, P, Chen, X, Ding, J.
Deposit date:2022-09-01
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GRH
DownloadVisualize
BU of 8grh by Molmil
Crystal structure of a constitutively active mutant of the alpha gamma heterodimer of human IDH3 in complex with CIT
Descriptor: CITRIC ACID, Human IDH3 alpha subunit, Isocitrate dehydrogenase [NAD] subunit gamma, ...
Authors:Sun, P, Chen, X, Ding, J.
Deposit date:2022-09-01
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GRU
DownloadVisualize
BU of 8gru by Molmil
Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human IDH3 in complex with ICT, NAD and Ca
Descriptor: CALCIUM ION, Human IDH3 alpha subunit, ISOCITRIC ACID, ...
Authors:Sun, P, Chen, X, Ding, J.
Deposit date:2022-09-02
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.847 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GRB
DownloadVisualize
BU of 8grb by Molmil
Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human IDH3
Descriptor: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, Isoform A of Isocitrate dehydrogenase [NAD] subunit beta
Authors:Sun, P, Chen, X, Ding, J.
Deposit date:2022-09-01
Release date:2022-12-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Structures of a constitutively active mutant of human IDH3 reveal new insights into the mechanisms of allosteric activation and the catalytic reaction.
J.Biol.Chem., 298, 2022
8GL9
DownloadVisualize
BU of 8gl9 by Molmil
Co-crystal structure of caPCNA bound to AOH1160 derivative 1LE
Descriptor: CHLORIDE ION, N~2~-(naphthalene-1-carbonyl)-N-(2-phenoxyphenyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Kenjic, N, Malkas, L.H, Hickey, R.J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
8GLA
DownloadVisualize
BU of 8gla by Molmil
Co-crystal structure of caPCNA bound to the AOH1996 derivative, AOH1996-1LE
Descriptor: CHLORIDE ION, N-[2-(3-methoxyphenoxy)phenyl]-N~2~-(naphthalene-1-carbonyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
8GBN
DownloadVisualize
BU of 8gbn by Molmil
Structure of Apo Human SIRT5 P114T Mutant
Descriptor: 1,2-ETHANEDIOL, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2023-02-26
Release date:2024-06-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Human SIRT5 variants with reduced stability and activity do not cause neuropathology in mice.
Iscience, 27, 2024
8GBL
DownloadVisualize
BU of 8gbl by Molmil
Structure of Apo Human SIRT5
Descriptor: NAD-dependent protein deacylase sirtuin-5, mitochondrial, ZINC ION
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2023-02-26
Release date:2024-06-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Human SIRT5 variants with reduced stability and activity do not cause neuropathology in mice.
Iscience, 27, 2024
8HAE
DownloadVisualize
BU of 8hae by Molmil
Cryo-EM structure of HACE1 dimer
Descriptor: E3 ubiquitin-protein ligase HACE1
Authors:Singh, S, Machida, S, Tulsian, N.K, Choong, Y.K, Ng, J, Shanker, S, Yaochen, L.D, Shi, J, Sivaraman, J, Machida, S.
Deposit date:2022-10-26
Release date:2023-06-28
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:Structural Basis for the Enzymatic Activity of the HACE1 HECT-Type E3 Ligase Through N-Terminal Helix Dimerization.
Adv Sci, 10, 2023

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon