Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3H6O
DownloadVisualize
BU of 3h6o by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 6-(2-fluorobenzyl)-2,4-dimethyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one, Pyruvate kinase isozymes M1/M2, ...
Authors:Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-04-23
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Activator-Bound Structures of Human Pyruvate Kinase M2
to be published
3BRW
DownloadVisualize
BU of 3brw by Molmil
Structure of the Rap-RapGAP complex
Descriptor: BERYLLIUM TRIFLUORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Scrima, A, Thomas, C, Deaconescu, D, Wittinghofer, A.
Deposit date:2007-12-21
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The Rap-RapGAP complex: GTP hydrolysis without catalytic glutamine and arginine residues
Embo J., 27, 2008
1T7H
DownloadVisualize
BU of 1t7h by Molmil
X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide
Descriptor: Endothelin-1
Authors:Hoh, F, Cerdan, R, Kaas, Q, Nishi, Y, Chiche, L, Kubo, S, Chino, N, Kobayashi, Y, Dumas, C, Aumelas, A.
Deposit date:2004-05-10
Release date:2004-12-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:High-resolution X-ray structure of the unexpectedly stable dimer of the [Lys(-2)-Arg(-1)-des(17-21)]endothelin-1 peptide
Biochemistry, 43, 2004
6A68
DownloadVisualize
BU of 6a68 by Molmil
the crystal structure of rat calcium-dependent activator protein for secretion (CAPS) DAMH domain
Descriptor: Calcium-dependent secretion activator 1, POTASSIUM ION
Authors:Zhou, H, Wei, Z.Q, Yao, D.Q, Zhang, R.G, Ma, C.
Deposit date:2018-06-26
Release date:2019-03-13
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structural and Functional Analysis of the CAPS SNARE-Binding Domain Required for SNARE Complex Formation and Exocytosis.
Cell Rep, 26, 2019
1ZXO
DownloadVisualize
BU of 1zxo by Molmil
X-ray Crystal Structure of Protein Q8A1P1 from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR25.
Descriptor: conserved hypothetical protein Q8A1P1
Authors:Kuzin, A.P, Yong, W, Forouhar, F, Vorobiev, S, Xiao, R, Ma, C, Acton, T, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-06-08
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-Ray structure of the hypothetical protein Q8A1P1 at the resolution 3.2A. Northeast Structural Genomics Consortium target BtR25.
To be Published
6A30
DownloadVisualize
BU of 6a30 by Molmil
Crystal Structure of Munc13-1 MUN Domain and Synaptobrevin-2 Juxtamembrane Linker Region
Descriptor: Protein unc-13 homolog A, Synaptobrevin-2 juxtamembrane linker peptide
Authors:Wang, S, Li, Y, Gong, J.H, Ye, S, Yang, X.F, Zhang, R.G, Ma, C.
Deposit date:2018-06-14
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.793 Å)
Cite:Munc18 and Munc13 serve as a functional template to orchestrate neuronal SNARE complex assembly.
Nat Commun, 10, 2019
2AJA
DownloadVisualize
BU of 2aja by Molmil
X-Ray structure of an ankyrin repeat family protein Q5ZSV0 from Legionella pneumophila. Northeast Structural Genomics Consortium target LgR21.
Descriptor: ankyrin repeat family protein
Authors:Kuzin, A.P, Chen, Y, Acton, T, Xiao, R, Conover, K, Ma, C, Kellie, R, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-08-01
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-Ray structure of an ankyrin repeat family protein Q5ZSV0 from Legionella pneumophila.
To be Published
3FWL
DownloadVisualize
BU of 3fwl by Molmil
Crystal Structure of the Full-Length Transglycosylase PBP1b from Escherichia coli
Descriptor: MOENOMYCIN, Penicillin-binding protein 1B
Authors:Sung, M.T, Lai, Y.T, Huang, C.Y, Chou, L.Y, Wong, C.H, Ma, C.
Deposit date:2009-01-19
Release date:2009-06-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.086 Å)
Cite:Crystal structure of the membrane-bound bifunctional transglycosylase PBP1b from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 106, 2009
4GAI
DownloadVisualize
BU of 4gai by Molmil
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra
Descriptor: EBI-005
Authors:Hou, J, Townson, S.A, Kovalchin, J.T, Masci, A, Kiner, O, Shu, Y, King, B, Thomas, C, Garcia, K.C, Furfine, E.S, Barnes, T.M.
Deposit date:2012-07-25
Release date:2013-02-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Design of a superior cytokine antagonist for topical ophthalmic use.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GAF
DownloadVisualize
BU of 4gaf by Molmil
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra, bound to human Interleukin-1 receptor type 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, EBI-005, Interleukin-1 receptor type 1, ...
Authors:Hou, J, Townson, S.A, Kovalchin, J.T, Masci, A, Kiner, O, Shu, Y, King, B, Thomas, C, Garcia, K.C, Furfine, E.S, Barnes, T.M.
Deposit date:2012-07-25
Release date:2013-02-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design of a superior cytokine antagonist for topical ophthalmic use.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F7O
DownloadVisualize
BU of 4f7o by Molmil
Crystal structure of CSN5
Descriptor: COP9 signalosome complex subunit 5, THIOCYANATE ION, ZINC ION
Authors:Echalier, A, Birol, M, Hoh, F, Dumas, C.
Deposit date:2012-05-16
Release date:2013-01-23
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into the regulation of the human COP9 signalosome catalytic subunit, CSN5/Jab1.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J8G
DownloadVisualize
BU of 3j8g by Molmil
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Descriptor: 23S rRNA, 50S ribosomal protein L1, 50S ribosomal protein L11, ...
Authors:Zhang, X, Yan, K, Zhang, Y, Li, N, Ma, C, Li, Z, Zhang, Y, Feng, B, Liu, J, Sun, Y, Xu, Y, Lei, J, Gao, N.
Deposit date:2014-10-24
Release date:2014-11-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly
Nucleic Acids Res., 2014
3SI8
DownloadVisualize
BU of 3si8 by Molmil
Human DNA polymerase eta - DNA ternary complex with the 5'T of a CPD in the active site (TT2)
Descriptor: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, 1,2-ETHANEDIOL, 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, ...
Authors:Biertumpfel, C, Zhao, Y, Kondo, Y, Ramon-Maiques, S, Gregory, M, Lee, J.Y, Masutani, C, Lehmann, A.R, Hanaoka, F, Yang, W.
Deposit date:2011-06-17
Release date:2011-08-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and mechanism of human DNA polymerase eta.
Nature, 465, 2010
3VMR
DownloadVisualize
BU of 3vmr by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with moenomycin
Descriptor: MOENOMYCIN, Monofunctional glycosyltransferase
Authors:Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
Deposit date:2011-12-15
Release date:2012-04-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.688 Å)
Cite:Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
3VMA
DownloadVisualize
BU of 3vma by Molmil
Crystal Structure of the Full-Length Transglycosylase PBP1b from Escherichia coli
Descriptor: MOENOMYCIN, Penicillin-binding protein 1B
Authors:Huang, C.Y, Sung, M.T, Lai, Y.T, Chou, L.Y, Shih, H.W, Cheng, W.C, Wong, C.H, Ma, C.
Deposit date:2011-12-09
Release date:2012-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.161 Å)
Cite:Crystal structure of the membrane-bound bifunctional transglycosylase PBP1b from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 106, 2009
1NDL
DownloadVisualize
BU of 1ndl by Molmil
THE AWD NUCLEOTIDE DIPHOSPHATE KINASE FROM DROSOPHILA
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Janin, J, Chiadmi, M, Dumas, C, Lascu, I, Lebras, G, Morera, S, Veron, M.
Deposit date:1993-11-27
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Awd nucleotide diphosphate kinase from Drosophila.
Structure, 1, 1993
1NDP
DownloadVisualize
BU of 1ndp by Molmil
ADENOSINE 5'-DIPHOSPHATE BINDING AND THE ACTIVE SITE OF NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Janin, J, Morera, S, Dumas, C, Lascu, I, Lebras, G, Veron, M.
Deposit date:1993-11-29
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Adenosine 5'-diphosphate binding and the active site of nucleoside diphosphate kinase.
Biochemistry, 33, 1994
3VMS
DownloadVisualize
BU of 3vms by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with NBD-Lipid II
Descriptor: Monofunctional glycosyltransferase
Authors:Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
Deposit date:2011-12-15
Release date:2012-04-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
4NPN
DownloadVisualize
BU of 4npn by Molmil
Crystal structure of human tetra-SUMO-2
Descriptor: Small ubiquitin-related modifier 2
Authors:Kung, C.C.-H, Naik, M.T, Chen, C.L, Ma, C, Huang, T.H.
Deposit date:2013-11-22
Release date:2014-10-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.633 Å)
Cite:Structural analysis of poly-SUMO chain recognition by the RNF4-SIMs domain.
Biochem.J., 462, 2014
3VMT
DownloadVisualize
BU of 3vmt by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with a Lipid II analog
Descriptor: MAGNESIUM ION, Monofunctional glycosyltransferase, [(2R,3R,4R,5S,6R)-4-[(2R)-1-[[(2S)-1-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethylamino]-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]oxy-3-acetamido-5-[(2S,3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl] [oxidanyl(3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaenoxy)phosphoryl] hydrogen phosphate
Authors:Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
Deposit date:2011-12-15
Release date:2012-04-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
3VMQ
DownloadVisualize
BU of 3vmq by Molmil
Crystal structure of Staphylococcus aureus membrane-bound transglycosylase: Apoenzyme
Descriptor: MAGNESIUM ION, Monofunctional glycosyltransferase
Authors:Huang, C.Y, Shih, H.W, Lin, L.Y, Tien, Y.W, Cheng, T.J.R, Cheng, W.C, Wong, C.H, Ma, C.
Deposit date:2011-12-15
Release date:2012-04-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.518 Å)
Cite:Crystal structure of Staphylococcus aureus transglycosylase in complex with a lipid II analog and elucidation of peptidoglycan synthesis mechanism
Proc.Natl.Acad.Sci.USA, 109, 2012
1BU1
DownloadVisualize
BU of 1bu1 by Molmil
SRC FAMILY KINASE HCK SH3 DOMAIN
Descriptor: PROTEIN (HEMOPOIETIC CELL KINASE)
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1998-09-09
Release date:1998-11-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:RT loop flexibility enhances the specificity of Src family SH3 domains for HIV-1 Nef.
Biochemistry, 37, 1998
1AVV
DownloadVisualize
BU of 1avv by Molmil
HIV-1 NEF PROTEIN, UNLIGANDED CORE DOMAIN
Descriptor: NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-21
Release date:1998-03-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
1AVZ
DownloadVisualize
BU of 1avz by Molmil
V-1 NEF PROTEIN IN COMPLEX WITH WILD TYPE FYN SH3 DOMAIN
Descriptor: FYN TYROSINE KINASE, NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-23
Release date:1998-03-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
3H0F
DownloadVisualize
BU of 3h0f by Molmil
Crystal structure of the human Fyn SH3 R96W mutant
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Proto-oncogene tyrosine-protein kinase Fyn
Authors:Ponchon, L, Hoh, F, Labesse, G, Dumas, C, Arold, S.T.
Deposit date:2009-04-09
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Synergy and allostery in ligand binding by HIV-1 Nef.
Biochem.J., 478, 2021

221716

건을2024-06-26부터공개중

PDB statisticsPDBj update infoContact PDBjnumon