Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8IDU
DownloadVisualize
BU of 8idu by Molmil
Crystal structure of substrate bound-form dehydroquinate dehydratase from Corynebacterium glutamicum
Descriptor: 1,3,4-TRIHYDROXY-5-OXO-CYCLOHEXANECARBOXYLIC ACID, 3-dehydroquinate dehydratase, GLYCEROL, ...
Authors:Lee, C.H, Kim, S, Kim, K.-J.
Deposit date:2023-02-14
Release date:2023-12-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Analysis of 3-Dehydroquinate Dehydratase from Corynebacterium glutamicum .
J Microbiol Biotechnol., 33, 2023
6J10
DownloadVisualize
BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
Descriptor: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
Authors:Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
Deposit date:2018-12-27
Release date:2019-04-17
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
8HJW
DownloadVisualize
BU of 8hjw by Molmil
Bi-functional malonyl-CoA reductuase from Chloroflexus aurantiacus
Descriptor: Short-chain dehydrogenase/reductase SDR
Authors:Ahn, J.W, Kim, S.
Deposit date:2022-11-24
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of bifunctional malonyl-CoA reductase from Chloroflexus aurantiacus reveals a dynamic domain movement for high enzymatic activity.
Int.J.Biol.Macromol., 242, 2023
5ZNX
DownloadVisualize
BU of 5znx by Molmil
Crystal structure of CM14-treated HlyU from Vibrio vulnificus
Descriptor: Transcriptional activator
Authors:Park, N, Kim, S, Jo, I, Ahn, J, Hong, S, Jeong, S, Baek, Y.
Deposit date:2018-04-11
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.114 Å)
Cite:Small-molecule inhibitor of HlyU attenuates virulence of Vibrio species.
Sci Rep, 9, 2019
2RE9
DownloadVisualize
BU of 2re9 by Molmil
Crystal structure of TL1A at 2.1 A
Descriptor: GLYCEROL, MAGNESIUM ION, TNF superfamily ligand TL1A
Authors:Jin, T.C, Guo, F, Kim, S, Howard, A.J, Zhang, Y.Z.
Deposit date:2007-09-25
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of TNF ligand family member TL1A at 2.1 A.
Biochem.Biophys.Res.Commun., 364, 2007
2VTC
DownloadVisualize
BU of 2vtc by Molmil
The structure of a glycoside hydrolase family 61 member, Cel61B from the Hypocrea jecorina.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CEL61B, NICKEL (II) ION
Authors:Karkehabadi, S, Hansson, H, Kim, S, Piens, K, Mitchinson, C, Sandgren, M.
Deposit date:2008-05-14
Release date:2008-09-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The First Structure of a Glycoside Hydrolase Family 61 Member, Cel61B from the Hypocrea Jecorina, at 1.6 A Resolution.
J.Mol.Biol., 383, 2008
7U5V
DownloadVisualize
BU of 7u5v by Molmil
Crystal structure of the Mixed Lineage Leukaemia (MLL1) SET Domain with the cofactor product S-Adenosylhomocysteine and Borealin peptide
Descriptor: Borealin, Histone-lysine N-methyltransferase 2A, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:An, S, Cho, U.S, Oh, H, Sha, L, Xu, J, Kim, S, Yang, W, An, W, Dou, Y.
Deposit date:2022-03-02
Release date:2023-09-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Non-canonical MLL1 activity regulates centromeric phase separation and genome stability.
Nat.Cell Biol., 25, 2023
8K7C
DownloadVisualize
BU of 8k7c by Molmil
Outward-facing structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, MAGNESIUM ION, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
8K7B
DownloadVisualize
BU of 8k7b by Molmil
post-occluded structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ADP ORTHOVANADATE, ATP-binding cassette sub-family B member 6, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
4AUA
DownloadVisualize
BU of 4aua by Molmil
Liganded X-ray crystal structure of cyclin dependent kinase 6 (CDK6)
Descriptor: 1H-benzimidazol-2-yl(1H-pyrrol-2-yl)methanone, CYCLIN-DEPENDENT KINASE 6
Authors:Cho, Y.S, Angove, H, Brain, C, Chen, C.H.T, Cheng, R, Chopra, R, Chung, K, Congreve, M, Dagostin, C, Davis, D, Feltell, R, Giraldes, J, Hiscock, S, Kim, S, Kovats, S, Lagu, B, Lewry, K, Loo, A, Lu, Y, Luzzio, M, Maniara, W, Mcmenamin, R, Mortenson, P, Benning, R, O'Reilly, M, Rees, D, Shen, J, Smith, T, Wang, Y, Williams, G, Woolford, A, Wrona, W, Xu, M, Yang, F, Howard, S.
Deposit date:2012-05-15
Release date:2013-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Fragment-Based Discovery of 7-Azabenzimidazoles as Potent, Highly Selective, and Orally Active CDK4/6 Inhibitors.
ACS Med Chem Lett, 3, 2012
4J15
DownloadVisualize
BU of 4j15 by Molmil
Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Descriptor: Aspartate--tRNA ligase, cytoplasmic, GLYCEROL
Authors:Kim, K.R, Park, S.H, Kim, H.S, Kim, B.-G, Kim, D.G, Rhee, K.H, Park, M.S, Kim, H.-J, Kim, S, Han, B.W.
Deposit date:2013-02-01
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Proteins, 81, 2013
3KEN
DownloadVisualize
BU of 3ken by Molmil
Human Eg5 in complex with S-trityl-L-cysteine
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, MAGNESIUM ION, ...
Authors:Parke, C.L, Wojcik, E.J, Kim, S, Worthylake, D.K.
Deposit date:2009-10-26
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Allosteric drug discrimination is coupled to mechanochemical changes in the kinesin-5 motor core.
J.Biol.Chem., 285, 2010
6LAI
DownloadVisualize
BU of 6lai by Molmil
The structural basis of the beta-carbonic anhydrase CafD (E54A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
5XAS
DownloadVisualize
BU of 5xas by Molmil
Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS
Descriptor: CITRATE ANION, Citrate-sodium symporter, SODIUM ION, ...
Authors:Jin, M.S, Kim, J.W, Kim, S, Kim, S, Lee, H, Lee, J.-O.
Deposit date:2017-03-14
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS
Sci Rep, 7, 2017
4MFU
DownloadVisualize
BU of 4mfu by Molmil
Crystal structure of human CTNNBL1(residues 77~563)
Descriptor: Beta-catenin-like protein 1
Authors:Ahn, J.W, Kim, S, Kim, K.J.
Deposit date:2013-08-28
Release date:2014-03-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.744 Å)
Cite:Structural insights into the novel ARM-repeat protein CTNNBL1 and its association with the hPrp19-CDC5L complex
Acta Crystallogr.,Sect.D, 70, 2014
4ZHI
DownloadVisualize
BU of 4zhi by Molmil
Eg5 motor domain mutant E162S
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11
Authors:Luo, M, Park, C, Worthylake, D, Kim, S.
Deposit date:2015-04-24
Release date:2016-06-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Eg5
To Be Published
4MFV
DownloadVisualize
BU of 4mfv by Molmil
Crystal structure of human CTNNBL1(residues 33~563)
Descriptor: Beta-catenin-like protein 1
Authors:Ahn, J.W, Kim, S, Kim, K.J.
Deposit date:2013-08-28
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Structural insights into the novel ARM-repeat protein CTNNBL1 and its association with the hPrp19-CDC5L complex
Acta Crystallogr.,Sect.D, 70, 2014
4FZ5
DownloadVisualize
BU of 4fz5 by Molmil
Crystal Structure of Human TIRAP TIR-domain
Descriptor: Toll/interleukin-1 receptor domain-containing adapter protein
Authors:Woo, J.R, Kim, S, Shoelson, S.E, Park, S.
Deposit date:2012-07-06
Release date:2013-05-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:X-ray Crystallographic Structure of TIR-Domain from the Human TIR-Domain Containing Adaptor Protein/MyD88 Adaptor-Like Protein (TIRAP/MAL)
Bull.Korean Chem.Soc., 33, 2013
4KUG
DownloadVisualize
BU of 4kug by Molmil
Crystal structure of 3-hydroxybutylryl-CoA dehydrogenase with NAD from Clostridium butyricum
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kim, E.J, Kim, S, Kim, K.J.
Deposit date:2013-05-22
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum
to be published
4KUE
DownloadVisualize
BU of 4kue by Molmil
Crystal structure of 3-hydroxybutylryl-CoA dehydrogenase from Clostridium butyricum
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, E.J, Kim, S, Kim, K.J.
Deposit date:2013-05-22
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum
to be published
4KUH
DownloadVisualize
BU of 4kuh by Molmil
Crystal structure of 3-hydroxybutylryl-CoA dehydrogenase with acetoacetyl-CoA from Clostridium butyricum
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase, ACETOACETYL-COENZYME A
Authors:Kim, E.J, Kim, S, Kim, K.J.
Deposit date:2013-05-22
Release date:2014-05-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum
to be published
3TDG
DownloadVisualize
BU of 3tdg by Molmil
Structural and functional characterization of Helicobacter pylori DsbG
Descriptor: FORMIC ACID, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Yoon, J.Y, Kim, J, Lee, S.J, Kim, H.S, Im, H.N, Yoon, H, Kim, K.H, Kim, S, Han, B.W, Suh, S.W.
Deposit date:2011-08-11
Release date:2011-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional characterization of Helicobacter pylori DsbG
Febs Lett., 585, 2011
4LVH
DownloadVisualize
BU of 4lvh by Molmil
Insight into highly conserved H1 subtype-specific epitopes in influenza virus hemagglutinin
Descriptor: CALCIUM ION, Hemagglutinin, MONOCLONAL ANTIBODY H-CHAIN, ...
Authors:Kim, K.H, Cho, K.J, Kim, S, Seok, J.H, Lee, J.-H.
Deposit date:2013-07-26
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insight into highly conserved h1 subtype-specific epitopes in influenza virus hemagglutinin
Plos One, 9, 2014
7V5C
DownloadVisualize
BU of 7v5c by Molmil
Cryo-EM structure of the mouse ABCB9 (ADP.BeF3-bound)
Descriptor: ABC-type oligopeptide transporter ABCB9, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7V5D
DownloadVisualize
BU of 7v5d by Molmil
Cryo-EM structure of the mouse ABCB9 (PG-bound)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ABC-type oligopeptide transporter ABCB9
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Ju, S, Kim, J.W, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022

221051

건을2024-06-12부터공개중

PDB statisticsPDBj update infoContact PDBjnumon