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4MAF
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BU of 4maf by Molmil
Soybean ATP Sulfurylase
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, ATP sulfurylase
著者Herrmann, J, Ravilious, G.E, McKinney, S.E, Westfall, C.S, Lee, S.G, Krishnan, H.B, Jez, J.M.
登録日2013-08-16
公開日2014-03-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structure and mechanism of soybean ATP sulfurylase and the committed step in plant sulfur assimilation.
J.Biol.Chem., 289, 2014
5CB8
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BU of 5cb8 by Molmil
Crystal structure of Adenosine-5'-phosphosulfate kinase in complex with APS and sulfate
分子名称: ACETATE ION, ADENOSINE-5'-PHOSPHOSULFATE, Probable adenylyl-sulfate kinase, ...
著者Herrmann, J, Jez, J.M.
登録日2015-06-30
公開日2015-09-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Recapitulating the Structural Evolution of Redox Regulation in Adenosine 5'-Phosphosulfate Kinase from Cyanobacteria to Plants.
J.Biol.Chem., 290, 2015
5CB6
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BU of 5cb6 by Molmil
Structure of adenosine-5'-phosphosulfate kinase
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, CACODYLATE ION, MAGNESIUM ION, ...
著者Herrmann, J, Jez, J.M.
登録日2015-06-30
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Recapitulating the Structural Evolution of Redox Regulation in Adenosine 5'-Phosphosulfate Kinase from Cyanobacteria to Plants.
J.Biol.Chem., 290, 2015
6P5T
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BU of 6p5t by Molmil
Surface-layer (S-layer) RsaA protein from Caulobacter crescentus bound to strontium and iodide
分子名称: IODIDE ION, S-layer protein, STRONTIUM ION
著者Chan, A.C, Herrmann, J, Smit, J, Wakatsuki, S, Murphy, M.E.
登録日2019-05-30
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A bacterial surface layer protein exploits multistep crystallization for rapid self-assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
7O2L
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BU of 7o2l by Molmil
Yeast 20S proteasome in complex with the covalently bound inhibitor b-lactone (2R,3S)-3-isopropyl-4-oxo-2-oxetane-carboxylate (IOC)
分子名称: (2 {R},3 {S})-3-methanoyl-4-methyl-2-hydroxy-pentanoic acid, 20S proteasome, BJ4_G0020160.mRNA.1.CDS.1, ...
著者Shi, Y.M, Hirschmann, M, Shi, Y.N, Shabbir, A, Abebew, D, Tobias, N.J, Gruen, P, Crames, J.J, Poeschel, L, Kuttenlochner, W, Richter, C, Herrmann, J, Mueller, R, Thanwisai, A, Pidot, S.J, Stinear, T.P, Groll, M, Kim, Y, Bode, H.
登録日2021-03-30
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria.
Nat.Chem., 14, 2022
4EQL
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BU of 4eql by Molmil
Crystal Structure of GH3.12 in complex with AMP and salicylate
分子名称: 2-HYDROXYBENZOIC ACID, 4-substituted benzoates-glutamate ligase GH3.12, ADENOSINE MONOPHOSPHATE
著者Westfall, C, Zubieta, C, Nanao, M, Herrmann, J, Jez, J.
登録日2012-04-19
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
4EPM
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BU of 4epm by Molmil
Crystal Structure of Arabidopsis GH3.12 (PBS3) in Complex with AMP
分子名称: 4-substituted benzoates-glutamate ligase GH3.12, ADENOSINE MONOPHOSPHATE, SULFATE ION
著者Westfall, C.S, Zubieta, C, Herrmann, J, Kapp, U, Nanao, M.H, Jez, J.M.
登録日2012-04-17
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
4EPL
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Crystal Structure of Arabidopsis thaliana GH3.11 (JAR1) in Complex with JA-Ile
分子名称: Jasmonic acid-amido synthetase JAR1, N-({(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetyl)-L-isoleucine
著者Westfall, C.S, Zubieta, C, Herrmann, J, Kapp, U, Nanao, M.H, Jez, J.M.
登録日2012-04-17
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
1G3F
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BU of 1g3f by Molmil
NMR STRUCTURE OF A 9 RESIDUE PEPTIDE FROM SMAC/DIABLO COMPLEXED TO THE BIR3 DOMAIN OF XIAP
分子名称: INHIBITOR OF APOPTOSIS PROTEIN 3, SMAC, ZINC ION
著者Liu, Z, Sun, C, Olejniczak, E.T, Meadows, R.P, Betz, S.F, Oost, T, Herrmann, J, Wu, J.C, Fesik, S.W.
登録日2000-10-24
公開日2001-01-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis for binding of Smac/DIABLO to the XIAP BIR3 domain.
Nature, 408, 2000
8B7Y
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BU of 8b7y by Molmil
Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Koller, T.O, Graf, M, Wilson, D.N.
登録日2022-10-03
公開日2023-01-25
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The Myxobacterial Antibiotic Myxovalargin: Biosynthesis, Structural Revision, Total Synthesis, and Molecular Characterization of Ribosomal Inhibition.
J.Am.Chem.Soc., 145, 2023
8OET
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BU of 8oet by Molmil
SFX structure of the class II photolyase complexed with a thymine dimer
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, DNA (14-mer), Deoxyribodipyrimidine photo-lyase, ...
著者Lane, T.J, Christou, N.-E, Melo, D.V.M, Apostolopoulou, V, Pateras, A, Mashhour, A.R, Galchenkova, M, Gunther, S, Reinke, P, Kremling, V, Oberthuer, D, Henkel, A, Sprenger, J, Scheer, T.E.S, Lange, E, Yefanov, O.N, Middendorf, P, Sellberg, J.A, Schubert, R, Fadini, A, Cirelli, C, Beale, E.V, Johnson, P, Dworkowski, F, Ozerov, D, Bertrand, Q, Wranik, M, Zitter, E.D, Turk, D, Bajt, S, Chapman, H, Bacellar, C.
登録日2023-03-12
公開日2023-11-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Time-resolved crystallography captures light-driven DNA repair.
Science, 382, 2023
5O28
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BU of 5o28 by Molmil
E. coli FolD apo
分子名称: Bifunctional protein FolD
著者Koehnke, J, Sikandar, A.
登録日2017-05-19
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
5O2A
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BU of 5o2a by Molmil
FolD Q98H
分子名称: Bifunctional protein FolD
著者Koehnke, J, Sikandar, A.
登録日2017-05-19
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
5O22
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BU of 5o22 by Molmil
E. coli FolD in complex with carolacton
分子名称: Bifunctional protein FolD, Carolacton
著者Koehnke, J, Sikandar, A.
登録日2017-05-19
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
6P3Q
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BU of 6p3q by Molmil
Calpain-5 (CAPN5) Protease Core (PC)
分子名称: Calpain-5
著者Velez, G, Sun, Y.J, Khan, S, Yang, J, Koster, H.J, Lokesh, G, Mahajan, V.
登録日2019-05-24
公開日2020-02-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Insights into the Unique Activation Mechanisms of a Non-classical Calpain and Its Disease-Causing Variants.
Cell Rep, 30, 2020
8ADG
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BU of 8adg by Molmil
Cryo-EM structure of Darobactin 22 bound BAM complex
分子名称: Darobactin 22, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Yuan, B, Marlovits, T.C.
登録日2022-07-08
公開日2023-01-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Darobactins Exhibiting Superior Antibiotic Activity by Cryo-EM Structure Guided Biosynthetic Engineering.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ADI
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BU of 8adi by Molmil
Cryo-EM structure of Darobactin 9 bound BAM complex
分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
著者Yuan, B, Marlovits, T.C.
登録日2022-07-08
公開日2023-01-11
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Darobactins Exhibiting Superior Antibiotic Activity by Cryo-EM Structure Guided Biosynthetic Engineering.
Angew.Chem.Int.Ed.Engl., 62, 2023
6VVY
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BU of 6vvy by Molmil
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin
分子名称: DNA (65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lilic, M, Boyaci, H, Chen, J, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VW0
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BU of 6vw0 by Molmil
Mycobacterium tuberculosis RNAP S456L mutant open promoter complex
分子名称: DNA (65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lilic, M, Boyaci, H, Chen, J, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VVX
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BU of 6vvx by Molmil
Mycobacterium tuberculosis WT RNAP transcription initiation intermediate structure with Sorangicin
分子名称: DNA (63-MER), DNA (65-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Lilic, M, Boyaci, H, Chen, J, Campbell, E.A, Darst, S.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VVZ
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BU of 6vvz by Molmil
Mycobacterium tuberculosis RNAP S456L mutant transcription initiation intermediate structure with Sorangicin
分子名称: DNA (62-MER), DNA (65-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Lilic, M, Boyaci, H, Chen, J, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
4EWV
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BU of 4ewv by Molmil
Crystal structure of GH3.12 in complex with AMPCPP
分子名称: 4-substituted benzoates-glutamate ligase GH3.12, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION
著者Zubieta, C, Nanao, M, Jez, J.
登録日2012-04-28
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.897 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
6VVT
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BU of 6vvt by Molmil
Crystal structure of a Mycobacterium smegmatis transcription initiation complex with Rifampicin-resistant RNA polymerase and antibiotic Sorangicin
分子名称: 1,2-ETHANEDIOL, DNA (26-MER), DNA (31-MER), ...
著者Lilic, M, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VVV
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BU of 6vvv by Molmil
Crystal structure of a Mycobacterium smegmatis transcription initiation complex with Rifampicin-resistant RNA polymerase
分子名称: DNA (26-MER), DNA (31-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Lilic, M, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VVS
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BU of 6vvs by Molmil
Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with antibiotic Sorangicin
分子名称: 1,2-ETHANEDIOL, DNA (26-MER), DNA (31-MER), ...
著者Lilic, M, Braffman, N, Darst, S.A, Campbell, E.A.
登録日2020-02-18
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.112 Å)
主引用文献The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase.
Proc.Natl.Acad.Sci.USA, 117, 2020

 

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