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2PLT
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BU of 2plt by Molmil
STRUCTURE DETERMINATION OF PLASTOCYANIN FROM A CRYSTAL SPECIMEN WITH HEMIHEDRAL TWINNING FRACTION OF ONE-HALF
分子名称: CALCIUM ION, COPPER (II) ION, PLASTOCYANIN
著者Redinbo, M.R, Merchant, S, Yeates, T.O.
登録日1993-05-06
公開日1993-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The 1.5-A crystal structure of plastocyanin from the green alga Chlamydomonas reinhardtii.
Biochemistry, 32, 1993
1A31
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BU of 1a31 by Molmil
HUMAN RECONSTITUTED DNA TOPOISOMERASE I IN COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*5IUP*5IU*TP*GP*AP*AP*AP*AP*AP*5IUP*5IUP*5IUP*5IUP*T)-3'), DNA (5'-D(*AP*AP*AP*AP*AP*TP*5IUP*5IUP*5IUP*5IUP*CP*AP*AP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3'), PROTEIN (TOPOISOMERASE I)
著者Redinbo, M.R, Stewart, L, Kuhn, P, Champoux, J.J, Hol, W.G.J.
登録日1998-01-27
公開日1998-08-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA.
Science, 279, 1998
1A35
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BU of 1a35 by Molmil
HUMAN TOPOISOMERASE I/DNA COMPLEX
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*TP*AP*GP*AP*AP*AP*AP*AP*(BRU)P*(BRU)P*TP*TP*T)-3'), DNA (5'-D(*AP*AP*AP*AP*AP*TP*+UP*+UP*+UP*+UP*CP*+UP*AP*AP*GP*TP*CP*TP*TP*TP*+ UP*T)-3'), PROTEIN (DNA TOPOISOMERASE I)
著者Redinbo, M.R, Stewart, L, Kuhn, P, Champoux, J.J, Hol, W.G.
登録日1998-01-29
公開日1998-08-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA.
Science, 279, 1998
1EJ9
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BU of 1ej9 by Molmil
CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE I DNA COMPLEX
分子名称: DNA (5'-D(*C*AP*AP*AP*AP*AP*GP*AP*CP*TP*CP*AP*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3'), DNA (5'-D(*C*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*TP*GP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3'), DNA TOPOISOMERASE I
著者Redinbo, M.R, Champoux, J.J, Hol, W.G.
登録日2000-03-01
公開日2000-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Novel insights into catalytic mechanism from a crystal structure of human topoisomerase I in complex with DNA.
Biochemistry, 39, 2000
3L57
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BU of 3l57 by Molmil
Crystal Structure of the Plasmid pCU1 TraI Relaxase Domain
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, MANGANESE (III) ION, ...
著者Redinbo, M.R, Nash, R.P.
登録日2009-12-21
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献The mechanism and control of DNA transfer by the conjugative relaxase of resistance plasmid pCU1.
Nucleic Acids Res., 38, 2010
3L6T
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BU of 3l6t by Molmil
Crystal Structure of an N-terminal Mutant of the Plasmid pCU1 TraI Relaxase Domain
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ...
著者Redinbo, M.R, Nash, R.P.
登録日2009-12-24
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The mechanism and control of DNA transfer by the conjugative relaxase of resistance plasmid pCU1.
Nucleic Acids Res., 38, 2010
3HX6
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BU of 3hx6 by Molmil
Crystal structure of Pseudomonas aeruginosa PilY1 C-terminal domain
分子名称: CALCIUM ION, Type 4 fimbrial biogenesis protein PilY1
著者Redinbo, M.R, Orans, J.
登録日2009-06-19
公開日2010-01-26
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure analysis reveals Pseudomonas PilY1 as an essential calcium-dependent regulator of bacterial surface motility.
Proc.Natl.Acad.Sci.USA, 107, 2010
5FF5
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BU of 5ff5 by Molmil
Crystal Structure of SeMet PaaA
分子名称: GLYCEROL, NICKEL (II) ION, PaaA, ...
著者Biernat, K.B, Redinbo, M.R.
登録日2015-12-17
公開日2016-04-27
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (2.933 Å)
主引用文献Post-translational Claisen Condensation and Decarboxylation en Route to the Bicyclic Core of Pantocin A.
J.Am.Chem.Soc., 138, 2016
1MX9
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BU of 1mx9 by Molmil
Crystal Structure of Human Liver Carboxylesterase in complexed with naloxone methiodide, a heroin analogue
分子名称: (5A,17R)-4,5-EPOXY-3,14-DIHYDROXY-17-METHYL-6-OXO-17-(2-PROPENYL)-MORPHINANIUM, 2-acetamido-2-deoxy-beta-D-glucopyranose, liver Carboxylesterase I
著者Bencharit, S, Morton, C.L, Xue, Y, Potter, P.M, Redinbo, M.R.
登録日2002-10-01
公開日2003-04-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis of Heroin and Cocaine Metabolism by a Promiscuous Human Drug-Processing Enzyme
Nat.Struct.Biol., 10, 2003
1MX5
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BU of 1mx5 by Molmil
Crystal Structure of Human Liver Carboxylesterase in complexed with homatropine, a cocaine analogue
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, HOMOTROPINE, ...
著者Bencharit, S, Morton, C.L, Xue, Y, Potter, P.M, Redinbo, M.R.
登録日2002-10-01
公開日2003-04-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of Heroin and Cocaine Metabolism by a Promiscuous Human Drug-Processing Enzyme
Nat.Struct.Biol., 10, 2003
6P2B
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BU of 6p2b by Molmil
Tethered PXR-LBD/SRC-1p bound to Garcinoic Acid
分子名称: (2Z,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydro-2H-1-benzopyran-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid, DIMETHYL SULFOXIDE, Nuclear receptor subfamily 1 group I member 2
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2019-05-21
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Garcinoic Acid Is a Natural and Selective Agonist of Pregnane X Receptor.
J.Med.Chem., 63, 2020
6EC6
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BU of 6ec6 by Molmil
Ruminococcus gnavus Beta-glucuronidase
分子名称: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
著者Biernat, K.A, Redinbo, M.R.
登録日2018-08-07
公開日2019-02-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
8SBG
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BU of 8sbg by Molmil
Crystal structure of B. theta tryptophanase in holo form
分子名称: PYRIDOXAL-5'-PHOSPHATE, Tryptophanase
著者Graboski, A.L, Redinbo, M.R.
登録日2023-04-03
公開日2023-08-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
8SIJ
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BU of 8sij by Molmil
Crystal structure of F. varium tryptophanase
分子名称: CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, Tryptophanase 1, ...
著者Graboski, A.L, Redinbo, M.R.
登録日2023-04-16
公開日2023-08-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
8SL7
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BU of 8sl7 by Molmil
Butyricicoccus sp. BIOML-A1 tryptophanase complex with (3S) ALG-05
分子名称: (E)-3-[(3S)-3-chloro-2-oxo-2,3-dihydro-1H-indol-3-yl]-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, Tryptophanase
著者Graboski, A.L, Redinbo, M.R.
登録日2023-04-21
公開日2023-08-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
5CZK
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BU of 5czk by Molmil
Structure of E. coli beta-glucuronidase bound with a novel, potent inhibitor 1-((6,8-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(4-hydroxyphenyl)thiourea
分子名称: 1-[(6,8-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl]-1-(2-hydroxyethyl)-3-(4-hydroxyphenyl)thiourea, Beta-glucuronidase
著者Roberts, A.R, Wallace, B.R, Redinbo, M.R.
登録日2015-07-31
公開日2015-10-14
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure and Inhibition of Microbiome beta-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity.
Chem.Biol., 22, 2015
3FLD
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BU of 3fld by Molmil
Crystal structure of the trai c-terminal domain
分子名称: Protein traI, SULFATE ION
著者Guogas, L.M, Kennedy, S.A, Redinbo, M.R.
登録日2008-12-18
公開日2009-02-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel fold in the TraI relaxase-helicase c-terminal domain is essential for conjugative DNA transfer.
J.Mol.Biol., 386, 2009
6U7J
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BU of 6u7j by Molmil
Uncultured Clostridium sp. Beta-glucuronidase
分子名称: Beta-glucuronidase, CALCIUM ION
著者Ervin, S.M, Redinbo, M.R.
登録日2019-09-03
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6D6W
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BU of 6d6w by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate
分子名称: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-04-23
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D8G
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D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2
分子名称: Glycosyl hydrolases family 2, sugar binding domain protein, SODIUM ION
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-04-26
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6DXU
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BU of 6dxu by Molmil
Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS)
分子名称: BICINE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
著者Little, M.S, Redinbo, M.R.
登録日2018-06-30
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Active site flexibility revealed in crystal structures of Parabacteroides merdae beta-glucuronidase from the human gut microbiome.
Protein Sci., 27, 2018
7SVE
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BU of 7sve by Molmil
Bile Salt Hydrolase A from Lactobacillus acidophilus
分子名称: Choloylglycine hydrolase
著者Walker, M.E, Redinbo, M.R.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Nat Microbiol, 8, 2023
7SVK
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Bile Salt Hydrolase from Lactobacillus reuteri
分子名称: Choloylglycine hydrolase, SULFATE ION
著者Walker, M.E, Beaty, V.V, Redinbo, M.R.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Nat Microbiol, 8, 2023
7SVF
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Bile salt hydrolase A from Lactobacillus gasseri with taurine bound
分子名称: 2-AMINOETHANESULFONIC ACID, Choloylglycine hydrolase, POTASSIUM ION
著者Walker, M.E, Redinbo, M.R.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Nat Microbiol, 8, 2023
7SVH
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BU of 7svh by Molmil
Bile Salt Hydrolase B from Lactobacillus gasseri
分子名称: Choloylglycine hydrolase, MAGNESIUM ION
著者Walker, M.E, Redinbo, M.R.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Nat Microbiol, 8, 2023

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