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5YKN
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BU of 5ykn by Molmil
crystal structure of Arabidopsis thaliana JMJ14 catalytic domain
分子名称: NICKEL (II) ION, Probable lysine-specific demethylase JMJ14, ZINC ION
著者Yang, Z, Du, J.
登録日2017-10-15
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases.
Plant Cell, 30, 2018
5ZNP
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BU of 5znp by Molmil
Crystal structure of PtSHL in complex with an H3K4me3 peptide
分子名称: 15-mer peptide from Histone H3.2, SHORT LIFE family protein, ZINC ION
著者Lv, X, Du, J.
登録日2018-04-10
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Nat Commun, 9, 2018
5ZNR
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BU of 5znr by Molmil
Crystal structure of PtSHL in complex with an H3K27me3 peptide
分子名称: 17-mer peptide from Histone H3.2, SHORT LIFE family protein, SULFATE ION, ...
著者Lv, X, Du, J.
登録日2018-04-10
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Nat Commun, 9, 2018
6A5M
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BU of 6a5m by Molmil
Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 2
分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ...
著者Li, X, Du, J.
登録日2018-06-24
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6A5N
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BU of 6a5n by Molmil
Crystal structure of Arabidopsis thaliana SUVH6 in complex with methylated DNA
分子名称: DNA (5'-D(*CP*AP*CP*TP*GP*CP*TP*GP*AP*GP*TP*AP*CP*T)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*CP*TP*(5CM)P*AP*GP*CP*AP*GP*T)-3'), Histone-lysine N-methyltransferase, ...
著者Li, X, Du, J.
登録日2018-06-24
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6A5K
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BU of 6a5k by Molmil
Crystal structure of Arabidopsis thaliana SUVH6 in complex with SAM, form 1
分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, S-ADENOSYLMETHIONINE, ...
著者Li, X, Du, J.
登録日2018-06-24
公開日2018-08-29
最終更新日2018-09-26
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3Q7K
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BU of 3q7k by Molmil
Formate Channel FocA from Salmonella typhimurium
分子名称: FORMIC ACID, Probable formate transporter
著者Lue, W, Du, J, Wacker, T, Gerbig-Smentek, E, Andrade, S.L.A, Einsle, O.
登録日2011-01-05
公開日2011-04-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献pH-dependent gating in a FocA formate channel
Science, 332, 2011
6MAL
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BU of 6mal by Molmil
Structure of human Nocturnin C-terminal domain
分子名称: MAGNESIUM ION, Nocturnin
著者Estrella, M.A, Du, J, Korennykh, A.
登録日2018-08-28
公開日2018-09-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Human Nocturnin Catalytic Domain.
Sci Rep, 8, 2018
3WMJ
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BU of 3wmj by Molmil
Crystal structure of EIAV vaccine gp45
分子名称: EIAV vaccine gp45
著者Liu, X, Du, J, Qiao, W.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献A mutation associated with EIAV vaccine strain within heptad repeat of EIAV gp45 provides insight into vaccine development for HIV
To be Published
3WMI
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BU of 3wmi by Molmil
Crystal structure of EIAV wild type gp45
分子名称: EIAV gp45 wild type
著者Liu, X, Du, J, Qiao, W.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A mutation associated with EIAV vaccine strain within heptad repeat of EIAV gp45 provides insight into vaccine development for HIV
To be Published
7XPJ
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BU of 7xpj by Molmil
crystal structure of rice ASI1 BAH domain
分子名称: BAH domain-containing protein
著者Yuan, J, Du, J.
登録日2022-05-04
公開日2023-01-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants.
Proc.Natl.Acad.Sci.USA, 120, 2023
7XPK
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BU of 7xpk by Molmil
crystal structure of rice ASI1 BAH domain in complex with a rice SUVH6 peptide
分子名称: Alpha-aminoacylpeptide hydrolase, BAH domain-containing protein
著者Yuan, J, Du, J.
登録日2022-05-04
公開日2023-01-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants.
Proc.Natl.Acad.Sci.USA, 120, 2023
5UOW
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BU of 5uow by Molmil
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2B in complex with glycine, glutamate, MK-801 and a GluN2B-specific Fab, at pH 6.5
分子名称: (5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annulene, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Lu, W, Du, J, Goehring, A, Gouaux, E.
登録日2017-02-01
公開日2017-03-22
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structures of the triheteromeric NMDA receptor and its allosteric modulation.
Science, 355, 2017
5UP2
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BU of 5up2 by Molmil
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2B in complex with glycine, glutamate, Ro 25-6981, MK-801 and a GluN2B-specific Fab, at pH 6.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GluN2B-specific Fab, ...
著者Lu, W, Du, J, Goehring, A, Gouaux, E.
登録日2017-02-01
公開日2017-03-22
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Cryo-EM structures of the triheteromeric NMDA receptor and its allosteric modulation.
Science, 355, 2017
5WP6
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BU of 5wp6 by Molmil
Cryo-EM structure of a human TRPM4 channel in complex with calcium and decavanadate
分子名称: DECAVANADATE, Transient receptor potential cation channel subfamily M member 4
著者Winkler, P.A, Huang, Y, Sun, W, Du, J, Lu, W.
登録日2017-08-03
公開日2017-12-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Electron cryo-microscopy structure of a human TRPM4 channel.
Nature, 552, 2017
6CUD
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BU of 6cud by Molmil
Structure of the human TRPC3 in a lipid-occupied, closed state
分子名称: (2R)-3-hydroxypropane-1,2-diyl dihexanoate, (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lu, W, Du, J, Fan, C, Choi, W.
登録日2018-03-25
公開日2018-05-16
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of the human lipid-gated cation channel TRPC3.
Elife, 7, 2018
7EF1
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BU of 7ef1 by Molmil
crystal structure of maize SHH2 SAWADEE domain in complex with and H3K9me1 peptide
分子名称: HB transcription factor, Histone H3.2, ZINC ION
著者Wang, Y, Du, J.
登録日2021-03-20
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EF2
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BU of 7ef2 by Molmil
Crystal structure of maize SHH2 SAWADEE domain in complex with an H3K9me3 peptide
分子名称: HB transcription factor, Histone H3.2, ZINC ION
著者Wang, Y, Du, J.
登録日2021-03-20
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EF3
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BU of 7ef3 by Molmil
crystal structure of maize SHH2 SAWADEE domain in complex with H3K9me2 peptide
分子名称: HB transcription factor, Histone H3.2, ZINC ION
著者Wang, Y, Du, J.
登録日2021-03-20
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EEZ
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BU of 7eez by Molmil
crystal structure of maize SHH2 SAWADEE domain
分子名称: HB transcription factor, ZINC ION
著者Wang, Y, Du, J.
登録日2021-03-20
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EF0
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BU of 7ef0 by Molmil
Crystal structure of maize SHH2 SAWADEE domain in complex with an H3K9M peptide
分子名称: HB transcription factor, Histone H3.2, ZINC ION
著者Wang, Y, Du, J.
登録日2021-03-20
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7MBR
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BU of 7mbr by Molmil
Cryo-EM structure of zebrafish TRPM5 in the presence of 6 uM calcium (apo state)
分子名称: (25R)-14beta,17beta-spirost-5-en-3beta-ol, (2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ruan, Z, Lu, W, Du, J, Haley, E.
登録日2021-04-01
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY
主引用文献Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7MBS
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BU of 7mbs by Molmil
Cryo-EM structure of zebrafish TRPM5 in the presence of 6 uM calcium (open state)
分子名称: (25R)-14beta,17beta-spirost-5-en-3beta-ol, (2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ruan, Z, Lu, W, Du, J, Haley, E.
登録日2021-04-01
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY
主引用文献Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7MBT
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BU of 7mbt by Molmil
Cryo-EM structure of zebrafish TRPM5 E337A mutant in the presence of 5 mM calcium (low calcium occupancy in the transmembrane domain)
分子名称: (25R)-14beta,17beta-spirost-5-en-3beta-ol, (2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ruan, Z, Lu, W, Du, J, Haley, E.
登録日2021-04-01
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY
主引用文献Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol., 28, 2021
7MBQ
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BU of 7mbq by Molmil
Cryo-EM structure of zebrafish TRPM5 in the presence of 5 mM calcium
分子名称: (25R)-14beta,17beta-spirost-5-en-3beta-ol, (2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ruan, Z, Lu, W, Du, J, Haley, E.
登録日2021-04-01
公開日2021-07-07
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol., 28, 2021

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