5ZNP

Crystal structure of PtSHL in complex with an H3K4me3 peptide

Summary for 5ZNP

DescriptorSHORT LIFE family protein, 15-mer peptide from Histone H3.2, ZINC ION, ... (4 entities in total)
Functional Keywordsbah, phd, shl, plant, h3k4me3, epigenetics, gene regulation
Biological sourcePopulus trichocarpa (Western balsam poplar)
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Total number of polymer chains4
Total molecular weight53257.43
Authors
Lv, X.,Du, J. (deposition date: 2018-04-10, release date: 2018-07-18)
Primary citation
Qian, S.,Lv, X.,Scheid, R.N.,Lu, L.,Yang, Z.,Chen, W.,Liu, R.,Boersma, M.D.,Denu, J.M.,Zhong, X.,Du, J.
Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Nat Commun, 9:2425-2425, 2018
PubMed: 29930355 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-018-04836-y
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.8 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.300210.5%5.3%4.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report