Crystal structure of PtSHL in complex with an H3K4me3 peptide

Summary for 5ZNP

DescriptorSHORT LIFE family protein, 15-mer peptide from Histone H3.2, ZINC ION, ... (4 entities in total)
Functional Keywordsbah, phd, shl, plant, h3k4me3, epigenetics, gene regulation
Biological sourcePopulus trichocarpa (Western balsam poplar)
Total number of polymer chains4
Total molecular weight53257.43
Lv, X.,Du, J. (deposition date: 2018-04-10, release date: 2018-07-18)
Primary citation
Qian, S.,Lv, X.,Scheid, R.N.,Lu, L.,Yang, Z.,Chen, W.,Liu, R.,Boersma, M.D.,Denu, J.M.,Zhong, X.,Du, J.
Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Nat Commun, 9:2425-2425, 2018
PubMed: 29930355 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-018-04836-y
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.300210.5%5.3%4.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report