Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1JPA
DownloadVisualize
BU of 1jpa by Molmil
Crystal Structure of unphosphorylated EphB2 receptor tyrosine kinase and juxtamembrane region
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, neural kinase, Nuk=Eph/Elk/Eck family receptor-like tyrosine kinase
著者Wybenga-Groot, L.E, Pawson, T, Sicheri, F.
登録日2001-08-01
公開日2001-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural basis for autoinhibition of the Ephb2 receptor tyrosine kinase by the unphosphorylated juxtamembrane region.
Cell(Cambridge,Mass.), 106, 2001
1LUZ
DownloadVisualize
BU of 1luz by Molmil
Crystal Structure of the K3L Protein From Vaccinia Virus (Wisconsin Strain)
分子名称: Protein K3
著者Dar, A.C, Sicheri, F.
登録日2002-05-23
公開日2002-08-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystal structure and functional analysis of vaccinia virus K3L reveals molecular determinants for PKR subversion and substrate recognition.
Mol.Cell, 10, 2002
1MBY
DownloadVisualize
BU of 1mby by Molmil
Murine Sak Polo Domain
分子名称: serine/threonine kinase
著者Leung, G.C, Hudson, J.W, Kozarova, A, Davidson, A, Dennis, J.W, Sicheri, F.
登録日2002-08-04
公開日2002-10-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Sak polo-box comprises a structural domain sufficient for mitotic subcellular localization.
Nat.Struct.Biol., 9, 2002
2F8K
DownloadVisualize
BU of 2f8k by Molmil
Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
分子名称: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
著者Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
登録日2005-12-02
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
1ZVD
DownloadVisualize
BU of 1zvd by Molmil
Regulation of Smurf2 Ubiquitin Ligase Activity by Anchoring the E2 to the HECT domain
分子名称: PHOSPHATE ION, SODIUM ION, Smad ubiquitination regulatory factor 2
著者Ogunjimi, A.A, Briant, D.J, Pece-Barbara, N, Le Roy, C, Di Guglielmo, G.M, Kavsak, P, Rasmussen, R.K, Seet, B.T, Sicheri, F, Wrana, J.L.
登録日2005-06-01
公開日2005-08-09
最終更新日2011-09-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Regulation of Smurf2 Ubiquitin Ligase Activity by Anchoring the E2 to the HECT Domain.
Mol.Cell, 19, 2005
2A19
DownloadVisualize
BU of 2a19 by Molmil
PKR kinase domain- eIF2alpha- AMP-PNP complex.
分子名称: Eukaryotic translation initiation factor 2 alpha subunit, Interferon-induced, double-stranded RNA-activated protein kinase, ...
著者Dar, A.C, Dever, T.E, Sicheri, F.
登録日2005-06-19
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Higher-Order Substrate Recognition of eIF2alpha by the RNA-Dependent Protein Kinase PKR.
Cell(Cambridge,Mass.), 122, 2005
2A1A
DownloadVisualize
BU of 2a1a by Molmil
PKR kinase domain-eIF2alpha Complex
分子名称: Eukaryotic translation initiation factor 2 alpha subunit, Interferon-induced, double-stranded RNA-activated protein kinase
著者Dar, A.C, Dever, T.E, Sicheri, F.
登録日2005-06-19
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Higher-Order Substrate Recognition of eIF2alpha by the RNA-Dependent Protein Kinase PKR.
Cell(Cambridge,Mass.), 122, 2005
3TWQ
DownloadVisualize
BU of 3twq by Molmil
Crystal structure of ARC4 from human Tankyrase 2 (apo form)
分子名称: GLYCEROL, SULFATE ION, Tankyrase-2
著者Guettler, S, Sicheri, F.
登録日2011-09-22
公開日2011-12-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Structural basis and sequence rules for substrate recognition by tankyrase explain the basis for cherubism disease.
Cell(Cambridge,Mass.), 147, 2011
3TWW
DownloadVisualize
BU of 3tww by Molmil
Crystal structure of ARC4 from human Tankyrase 2 in complex with peptide from human LNPEP (chimeric peptide)
分子名称: SULFATE ION, Tankyrase-2, human LNPEP
著者Guettler, S, Sicheri, F.
登録日2011-09-22
公開日2011-12-07
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis and sequence rules for substrate recognition by tankyrase explain the basis for cherubism disease.
Cell(Cambridge,Mass.), 147, 2011
3TWS
DownloadVisualize
BU of 3tws by Molmil
Crystal structure of ARC4 from human Tankyrase 2 in complex with peptide from human TERF1 (chimeric peptide)
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, HEXAETHYLENE GLYCOL, ...
著者Guettler, S, Sicheri, F.
登録日2011-09-22
公開日2011-12-07
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis and sequence rules for substrate recognition by tankyrase explain the basis for cherubism disease.
Cell(Cambridge,Mass.), 147, 2011
3TWV
DownloadVisualize
BU of 3twv by Molmil
Crystal structure of ARC4 from human Tankyrase 2 in complex with peptide from human NUMA1 (chimeric peptide)
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, SULFATE ION, ...
著者Guettler, S, Sicheri, F.
登録日2011-09-22
公開日2011-12-07
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural basis and sequence rules for substrate recognition by tankyrase explain the basis for cherubism disease.
Cell(Cambridge,Mass.), 147, 2011
3LJ1
DownloadVisualize
BU of 3lj1 by Molmil
IRE1 complexed with Cdk1/2 Inhibitor III
分子名称: 5-AMINO-3-{[4-(AMINOSULFONYL)PHENYL]AMINO}-N-(2,6-DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
3LJ2
DownloadVisualize
BU of 3lj2 by Molmil
IRE1 complexed with JAK Inhibitor I
分子名称: 2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-7H-BENZ[H]-IMIDAZ[4,5-F]ISOQUINOLINE-7-ONE, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
3LJ0
DownloadVisualize
BU of 3lj0 by Molmil
IRE1 complexed with ADP and Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
3MKS
DownloadVisualize
BU of 3mks by Molmil
Crystal Structure of yeast Cdc4/Skp1 in complex with an allosteric inhibitor SCF-I2
分子名称: 1,1'-binaphthalene-2,2'-dicarboxylic acid, Cell division control protein 4, GLYCEROL, ...
著者Orlicky, S, Sicheri, F, Tyers, M, Tang, X.
登録日2010-04-15
公開日2010-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An allosteric inhibitor of substrate recognition by the SCF(Cdc4) ubiquitin ligase.
Nat.Biotechnol., 28, 2010
7KJU
DownloadVisualize
BU of 7kju by Molmil
Cgi121-tRNA complex
分子名称: MAGNESIUM ION, RNA (75-MER)
著者Ceccarelli, D.F, Beenstock, J, Wan, L.C.K, Sicheri, F.
登録日2020-10-26
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献A substrate binding model for the KEOPS tRNA modifying complex.
Nat Commun, 11, 2020
7KJT
DownloadVisualize
BU of 7kjt by Molmil
KEOPS tRNA modifying sub-complex of archaeal Cgi121 and tRNA
分子名称: RNA (70-MER), Regulatory protein Cgi121
著者Ceccarelli, D.F, Beenstock, J, Mao, D.Y.L, Sicheri, F.
登録日2020-10-26
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献A substrate binding model for the KEOPS tRNA modifying complex.
Nat Commun, 11, 2020
4KSK
DownloadVisualize
BU of 4ksk by Molmil
Gumby/Fam105B in complex with ubiquitin
分子名称: Polyubiquitin-C, Protein FAM105B, SULFATE ION
著者Ceccarelli, D.F, Juang, Y.-C, Sicheri, F.
登録日2013-05-17
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis.
Nature, 498, 2013
4JVG
DownloadVisualize
BU of 4jvg by Molmil
B-Raf Kinase in Complex with Birb796
分子名称: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Serine/threonine-protein kinase B-raf
著者Lavoie, H, Thevakumaran, N, Gavory, G, Li, J, Padeganeh, A, Guiral, S, Duchaine, J, Mao, D.Y.L, Bouvier, M, Sicheri, F, Therrien, M.
登録日2013-03-25
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Inhibitors that stabilize a closed RAF kinase domain conformation induce dimerization.
Nat.Chem.Biol., 9, 2013
4KSL
DownloadVisualize
BU of 4ksl by Molmil
Gumby/Fam105B in complex with linear di-ubiquitin
分子名称: Polyubiquitin-C, Protein FAM105B
著者Juang, Y.-C, Ceccarelli, D.F, Sicheri, F.
登録日2013-05-17
公開日2013-06-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献The linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis.
Nature, 498, 2013
4MDK
DownloadVisualize
BU of 4mdk by Molmil
Cdc34-ubiquitin-CC0651 complex
分子名称: 4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acid, Ubiquitin, Ubiquitin-conjugating enzyme E2 R1
著者Ceccarelli, D.F, Orlicky, S, Tyers, M, Sicheri, F.
登録日2013-08-22
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6095 Å)
主引用文献E2 enzyme inhibition by stabilization of a low-affinity interface with ubiquitin.
Nat.Chem.Biol., 10, 2014
4KSJ
DownloadVisualize
BU of 4ksj by Molmil
Crystal structure of the OTU domain of Gumby/Fam105B at 1.6 angstrom
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, Protein FAM105B
著者Ceccarelli, D.F, Juang, Y.-C, Sicheri, F.
登録日2013-05-17
公開日2013-06-05
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis.
Nature, 498, 2013
6CAD
DownloadVisualize
BU of 6cad by Molmil
Crystal structure of RAF kinase domain bound to the inhibitor 2a
分子名称: 1-(propan-2-yl)-3-({3-[3-(trifluoromethyl)phenyl]isoquinolin-8-yl}ethynyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Serine/threonine-protein kinase B-raf
著者Maisonneuve, P, Kurinov, I, Assadieskandar, A, Yu, C, Liu, X, Chen, Y.-C, Prakash, G.K.S, Zhang, C, SIcheri, F.
登録日2018-01-30
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Effects of rigidity on the selectivity of protein kinase inhibitors.
Eur J Med Chem, 146, 2018
6CPM
DownloadVisualize
BU of 6cpm by Molmil
Structure of the USP15 deubiquitinase domain in complex with a third-generation inhibitory Ubv
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Singer, A.U, Teyra, J, Boehmelt, G, Lenter, M, Sicheri, F, Sidhu, S.S.
登録日2018-03-13
公開日2019-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15.
Structure, 27, 2019
6BVA
DownloadVisualize
BU of 6bva by Molmil
Ubiquitin Variant (UbV.Fl10.1) bound to a human Skp1-Fbl10 fragment complex.
分子名称: Lysine-specific demethylase 2B, Polyubiquitin-B, S-phase kinase-associated protein 1
著者Manczyk, N, Sicheri, F.
登録日2017-12-12
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献A Structure-Based Strategy for Engineering Selective Ubiquitin Variant Inhibitors of Skp1-Cul1-F-Box Ubiquitin Ligases.
Structure, 26, 2018

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon