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7EV3
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BU of 7ev3 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-10 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-fluoranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
7EV2
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BU of 7ev2 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-11 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-chloranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
7XEZ
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BU of 7xez by Molmil
NMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #2
Descriptor: Histone acetyltransferase p300,NUT family member 1, ZINC ION
Authors:Yu, D, Zeng, L, Zhou, M.-M.
Deposit date:2022-03-31
Release date:2023-04-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural mechanism of BRD4-NUT and p300 bipartite interaction in propagating aberrant gene transcription in chromatin in NUT carcinoma.
Nat Commun, 14, 2023
8IWO
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BU of 8iwo by Molmil
The rice Na+/H+ antiporter SOS1 in an auto-inhibited state
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, OsSOS1
Authors:Zhang, X.Y, Tang, L.H, Zhang, C.R, Nie, J.W, Chen, Y.H.
Deposit date:2023-03-30
Release date:2023-11-22
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structure and activation mechanism of the rice Salt Overly Sensitive 1 (SOS1) Na + /H + antiporter.
Nat.Plants, 9, 2023
8J2M
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BU of 8j2m by Molmil
The truncated rice Na+/H+ antiporter SOS1 (1-976) in a constitutively active state
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Na+/H+ antiporter
Authors:Zhang, X.Y, Tang, L.H, Zhang, C.R, Nie, J.W, Chen, Y.H.
Deposit date:2023-04-14
Release date:2023-11-22
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and activation mechanism of the rice Salt Overly Sensitive 1 (SOS1) Na + /H + antiporter.
Nat.Plants, 9, 2023
8YY8
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BU of 8yy8 by Molmil
Fzd7 -Gs complex
Descriptor: Frizzled-7, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Chen, B, Xu, L, Han, G.W, Xu, F.
Deposit date:2024-04-03
Release date:2024-04-24
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Cryo-EM structure of constitutively active human Frizzled 7 in complex with heterotrimeric G s .
Cell Res., 31, 2021
7Y3O
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BU of 7y3o by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody BIOLS56
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of BIOLS56, Light chain of BIOLS56, ...
Authors:Rao, X, Gao, F, Wu, Y, Gao, F.
Deposit date:2022-06-11
Release date:2023-12-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Defining a de novo non-RBM antibody as RBD-8 and its synergistic rescue of immune-evaded antibodies to neutralize Omicron SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
7Y3N
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BU of 7y3n by Molmil
Crystal structure of SARS-CoV receptor binding domain in complex with human antibody BIOLS56
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of BIOLS56, ...
Authors:Rao, X, Chai, Y, Wu, Y, Gao, F.
Deposit date:2022-06-11
Release date:2023-12-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Defining a de novo non-RBM antibody as RBD-8 and its synergistic rescue of immune-evaded antibodies to neutralize Omicron SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
8V1G
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BU of 8v1g by Molmil
plasmodium falciparum Niemann-Pick type C1-related protein bound with MMV009108
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, MMV009108, ...
Authors:Zhang, Z, Lyu, M.
Deposit date:2023-11-20
Release date:2024-11-20
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:The Plasmodium falciparum NCR1 transporter is an antimalarial target that exports cholesterol from the parasite's plasma membrane.
Sci Adv, 10, 2024
8V12
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BU of 8v12 by Molmil
plasmodium falciparum Niemann-Pick type C1-related protein form II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Niemann-Pick type C1-related protein
Authors:Zhang, Z, Lyu, M.
Deposit date:2023-11-19
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:The Plasmodium falciparum NCR1 transporter is an antimalarial target that exports cholesterol from the parasite's plasma membrane.
Sci Adv, 10, 2024
8V0G
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BU of 8v0g by Molmil
plasmodium falciparum Niemann-Pick type C1-related protein form I
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Niemann-Pick type C1-related protein
Authors:Zhang, Z, Lyu, M.
Deposit date:2023-11-17
Release date:2024-11-13
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:The Plasmodium falciparum NCR1 transporter is an antimalarial target that exports cholesterol from the parasite's plasma membrane.
Sci Adv, 10, 2024
8W2F
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BU of 8w2f by Molmil
Plasmodium falciparum 20S proteasome bound to an inhibitor
Descriptor: (3S)-1-[(2-fluoroethoxy)acetyl]-N-{[(4P)-4-(6-methylpyridin-3-yl)-1,3-thiazol-2-yl]methyl}piperidine-3-carboxamide, Proteasome endopeptidase complex, Proteasome subunit alpha type, ...
Authors:Han, Y, Deng, X, Ray, S, Chen, Z, Phillips, M.
Deposit date:2024-02-20
Release date:2024-07-31
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Identification of potent and reversible piperidine carboxamides that are species-selective orally active proteasome inhibitors to treat malaria.
Cell Chem Biol, 31, 2024
7DRC
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BU of 7drc by Molmil
Cryo-EM structure of plant receptor like protein RXEG1 in complex with xyloglucanase XEG1 and BAK1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinosteroid insensitive 1-associated receptor kinase 1, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2020-12-27
Release date:2022-06-22
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7DRB
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BU of 7drb by Molmil
Crystal structure of plant receptor like protein RXEG1 with xyloglucanase XEG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell 12A endoglucanase, ...
Authors:Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J.
Deposit date:2020-12-27
Release date:2022-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Plant receptor-like protein activation by a microbial glycoside hydrolase.
Nature, 610, 2022
7XFG
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BU of 7xfg by Molmil
NMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #1
Descriptor: Histone acetyltransferase p300, NUT family member 1, ZINC ION
Authors:Yu, D, Zeng, L, Zhou, M.-M.
Deposit date:2022-04-01
Release date:2023-04-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural mechanism of BRD4-NUT and p300 bipartite interaction in propagating aberrant gene transcription in chromatin in NUT carcinoma.
Nat Commun, 14, 2023
8YV9
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BU of 8yv9 by Molmil
Crystal structure of Caenorhabditis elegans HIM-8 ZF1-2-CTD domain in complex with Chromosome X pairing center
Descriptor: C2H2-type domain-containing protein, DNA (5'-D(*TP*GP*CP*AP*CP*TP*GP*AP*CP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*GP*TP*CP*AP*GP*TP*GP*CP*A)-3'), ...
Authors:Li, F.D, Li, M.L.
Deposit date:2024-03-28
Release date:2024-12-11
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural basis for C. elegans pairing center DNA binding specificity by the ZIM/HIM-8 family proteins.
Nat Commun, 15, 2024
8YVA
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BU of 8yva by Molmil
Crystal structure of Caenorhabditis elegans ZIM-2 ZF1-2-CTD domain in complex with Chromosome V pairing center
Descriptor: C2H2-type domain-containing protein, DNA (5'-D(*AP*GP*CP*AP*GP*CP*GP*CP*CP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*GP*GP*CP*GP*CP*TP*GP*CP*T)-3'), ...
Authors:Li, F.D, Li, M.L.
Deposit date:2024-03-28
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for C. elegans pairing center DNA binding specificity by the ZIM/HIM-8 family proteins.
Nat Commun, 15, 2024
8YVB
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BU of 8yvb by Molmil
Crystal structure of Caenorhabditis elegans ZIM-1 ZF1-2-CTD domain in complex with Chromosome II/III pairing center
Descriptor: C2H2-type domain-containing protein, DNA (5'-D(*TP*TP*GP*GP*TP*CP*TP*GP*CP*TP*A)-3'), DNA (5'-D(P*AP*GP*CP*AP*GP*AP*CP*CP*AP*A)-3'), ...
Authors:Li, F.D, Li, M.L.
Deposit date:2024-03-28
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for C. elegans pairing center DNA binding specificity by the ZIM/HIM-8 family proteins.
Nat Commun, 15, 2024
5XLO
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BU of 5xlo by Molmil
Anti-CRISPR proteins AcrF1/2 bound to Csy surveillance complex with a 32nt spacer crRNA backbone region
Descriptor: CRISPR-associated protein Csy3, Uncharacterized protein AcrF1, crRNA with 32nt spacer sequence
Authors:Peng, R, Shi, Y, Gao, G.F.
Deposit date:2017-05-11
Release date:2018-01-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Alternate binding modes of anti-CRISPR viral suppressors AcrF1/2 to Csy surveillance complex revealed by cryo-EM structures.
Cell Res., 27, 2017
6L4W
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BU of 6l4w by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Asparaginyl endopeptidase, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
6L4Y
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BU of 6l4y by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Asparaginyl endopeptidase, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
7CRB
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BU of 7crb by Molmil
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
Descriptor: Avirulence protein ATR1, NAD+ hydrolase (NADase)
Authors:Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
Deposit date:2020-08-13
Release date:2020-12-16
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
6L4X
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BU of 6l4x by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: Asparaginyl endopeptidase
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.644 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
5XZ9
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BU of 5xz9 by Molmil
Crystal Structure of Phosphofructokinase from Staphylococcus aureus in complex with adenylylimidodiphosphate, the ATP analogue
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, GLYCEROL
Authors:Wang, C.L, Tian, T, Zang, J.Y.
Deposit date:2017-07-12
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into the Regulation of Staphylococcus aureus Phosphofructokinase by Tetramer-Dimer Conversion.
Biochemistry, 57, 2018
7Z8O
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BU of 7z8o by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
Descriptor: 2,4,6-tris(chloromethyl)-1,3,5-triazine, GLYCEROL, Spike protein S1, ...
Authors:Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
Deposit date:2022-03-18
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023

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