Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8E34
DownloadVisualize
BU of 8e34 by Molmil
CryoEM structures of bAE1 captured in multiple states
Descriptor: Anion exchange protein
Authors:Zhekova, H.R, Wang, W.G, Jiang, J.S, Tsirulnikov, K, Muhammad-Khan, G.H, Azimov, R, Abuladze, N, Kao, L, Newman, D, Noskov, S.Y, Tieleman, P, Zhou, Z.H, Pushkin, A, Kurtz, I.
Deposit date:2022-08-16
Release date:2023-01-25
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (6 Å)
Cite:CryoEM structures of anion exchanger 1 capture multiple states of inward- and outward-facing conformations.
Commun Biol, 5, 2022
8QCY
DownloadVisualize
BU of 8qcy by Molmil
Cryo-EM structure of the outward-facing FLVCR2
Descriptor: Heme transporter FLVCR2
Authors:Weng, T.-H, Wu, D, Safarian, S.
Deposit date:2023-08-28
Release date:2024-04-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism of choline and ethanolamine transport in humans.
Nature, 630, 2024
8QH4
DownloadVisualize
BU of 8qh4 by Molmil
Crystal structure of reduced respiratory Complex I subunits NuoEF from Aquifex aeolicus bound to oxidized 3-acetylpyridine adenine dinucleotide
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T.
Deposit date:2023-09-06
Release date:2024-04-03
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structures of 3-acetylpyridine adenine dinucleotide and ADP-ribose bound to the electron input module of respiratory complex I.
Structure, 32, 2024
8C3D
DownloadVisualize
BU of 8c3d by Molmil
Sulfonated Calpeptin is a promising drug candidate against SARS-CoV-2 infections
Descriptor: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, CALCIUM ION, Cathepsin K
Authors:Loboda, J, Karnicar, K, Lindic, N, Usenik, A, Lieske, J, Meents, A, Guenther, S, Reinke, P.Y.A, Falke, S, Ewert, W, Turk, D.
Deposit date:2022-12-23
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
8RGI
DownloadVisualize
BU of 8rgi by Molmil
Structure of DYNLT1:DYNLT2B (TCTEX1:TCTEX1D2) heterodimer.
Descriptor: Dynein light chain Tctex-type 1, Dynein light chain Tctex-type protein 2B
Authors:Mukhopadhyay, A.G, Toropova, K, Daly, L, Wells, J, Vuolo, L, Seda, M, Jenkins, D, Stephens, D.J, Roberts, A.J.
Deposit date:2023-12-13
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure and tethering mechanism of dynein-2 intermediate chains in intraflagellar transport.
Embo J., 43, 2024
8CAF
DownloadVisualize
BU of 8caf by Molmil
N8C_Fab3b in complex with NEDD8-CUL1(WHB)
Descriptor: Cullin-1, Fab Heavy Chain, Fab Light Chain, ...
Authors:Duda, D.M, Yanishevski, D, Henneberg, L.T, Schulman, B.A.
Deposit date:2023-01-24
Release date:2023-09-13
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Activity-based profiling of cullin-RING E3 networks by conformation-specific probes.
Nat.Chem.Biol., 19, 2023
8QGY
DownloadVisualize
BU of 8qgy by Molmil
Cryo-EM structure of C-terminally truncated Apoptosis signal-regulating kinase 1 (ASK1)
Descriptor: Mitogen-activated protein kinase kinase kinase 5
Authors:Kosek, D, Honzejkova, K, Obsilova, V, Obsil, T.
Deposit date:2023-09-06
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:The cryo-EM structure of ASK1 reveals an asymmetric architecture allosterically modulated by TRX1.
Elife, 13, 2024
8QX7
DownloadVisualize
BU of 8qx7 by Molmil
Apo-C-Terminal Domain Homolog of the Orange Carotenoid Protein from Anabaena at a resolution of 1.95 Angstroms
Descriptor: All4940 protein, MALONIC ACID
Authors:Sklyar, J, Wilson, A, Kirilovsky, D, Adir, N.
Deposit date:2023-10-22
Release date:2024-04-03
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights into energy quenching mechanisms and carotenoid uptake by orange carotenoid protein homologs: HCP4 and CTDH.
Int.J.Biol.Macromol., 265, 2024
8QZR
DownloadVisualize
BU of 8qzr by Molmil
SARS-CoV-2 delta RBD complexed with BA.4/5-9 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BA.4/5-9 heavy chain, BA.4/5-9 light chain, ...
Authors:Zhou, D, Ren, J, Stuart, D.I.
Deposit date:2023-10-29
Release date:2024-04-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Emerging variants develop total escape from potent monoclonal antibodies induced by BA.4/5 infection.
Nat Commun, 15, 2024
8CMN
DownloadVisualize
BU of 8cmn by Molmil
18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein
Descriptor: DNA-binding protein 7d, N-[2-(2-methyl-1,3-dioxolan-2-yl)phenyl]-2-{[5-(trifluoromethyl)pyridin-2-yl]amino}pyridine-4-carboxamide
Authors:Deepak, D, Corvaglia, V, Wu, J, Huc, I.
Deposit date:2023-02-20
Release date:2023-07-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein
To Be Published
8QD0
DownloadVisualize
BU of 8qd0 by Molmil
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Descriptor: CHOLINE ION, Heme transporter FLVCR2
Authors:Weng, T.-H, Wu, D, Safarian, S.
Deposit date:2023-08-28
Release date:2024-04-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular mechanism of choline and ethanolamine transport in humans.
Nature, 630, 2024
7BW7
DownloadVisualize
BU of 7bw7 by Molmil
Cryo-EM Structure for the Ectodomain of the Full-length Human Insulin Receptor in Complex with 1 Insulin.
Descriptor: Insulin fusion, Insulin receptor
Authors:Yu, D, Zhang, X, Sun, J, Li, X, Wu, Z, Han, X, Fan, C, Ma, Y, Ouyang, Q, Wang, T.
Deposit date:2020-04-13
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Insulin Binding Induced the Ectodomain Conformational Dynamics in the Full-length Human Insulin Receptor
To Be Published
7BW8
DownloadVisualize
BU of 7bw8 by Molmil
Cryo-EM Structure for the Insulin Binding Region in the Ectodomain of the Full-length Human Insulin Receptor in Complex with 1 Insulin
Descriptor: Insulin fusion, Insulin receptor
Authors:Yu, D, Zhang, X, Sun, J, Li, X, Wu, Z, Han, X, Fan, C, Ma, Y, Ouyang, Q, Wang, T.
Deposit date:2020-04-14
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Insulin Binding Induced the Ectodomain Conformational Dynamics in the Full-length Human Insulin Receptor
To Be Published
8C80
DownloadVisualize
BU of 8c80 by Molmil
Cryo-EM structure of the yeast SPT-Orm1-Monomer complex
Descriptor: 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ERGOSTEROL, N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide, ...
Authors:Schaefer, J, Koerner, C, Parey, K, Januliene, D, Moeller, A, Froehlich, F.
Deposit date:2023-01-18
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the ceramide-bound SPOTS complex.
Nat Commun, 14, 2023
6ZVO
DownloadVisualize
BU of 6zvo by Molmil
Crystal structure of unliganded MLKL executioner domain
Descriptor: BROMIDE ION, CHLORIDE ION, Mixed lineage kinase domain-like protein
Authors:Fiegen, D, Bauer, M, Nar, H.
Deposit date:2020-07-27
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.371 Å)
Cite:Locking mixed-lineage kinase domain-like protein in its auto-inhibited state prevents necroptosis.
Proc.Natl.Acad.Sci.USA, 117, 2020
8C81
DownloadVisualize
BU of 8c81 by Molmil
Cryo-EM structure of the yeast SPT-Orm1-Sac1 complex
Descriptor: 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ERGOSTEROL, N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide, ...
Authors:Schaefer, J, Koerner, C, Parey, K, Januliene, D, Moeller, A, Froehlich, F.
Deposit date:2023-01-18
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the ceramide-bound SPOTS complex.
Nat Commun, 14, 2023
8C82
DownloadVisualize
BU of 8c82 by Molmil
Cryo-EM structure of the yeast SPT-Orm1-Dimer complex
Descriptor: 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Schaefer, J, Koerner, C, Parey, K, Januliene, D, Moeller, A, Froehlich, F.
Deposit date:2023-01-18
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the ceramide-bound SPOTS complex.
Nat Commun, 14, 2023
7ACA
DownloadVisualize
BU of 7aca by Molmil
CRYSTAL STRUCTURE OF AN ACTIVE KRAS G12D (GPPCP) DIMER IN COMPLEX WITH BI-5747
Descriptor: (3~{S})-5-oxidanyl-3-[2-[[6-[[3-[(1~{S})-6-oxidanyl-3-oxidanylidene-1,2-dihydroisoindol-1-yl]-1~{H}-indol-2-yl]methylamino]hexylamino]methyl]-1~{H}-indol-3-yl]-2,3-dihydroisoindol-1-one, 1,2-ETHANEDIOL, GTPase KRas, ...
Authors:Kessler, D.
Deposit date:2020-09-10
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:CRYSTAL STRUCTURE OF AN ACTIVE KRAS G12D (GPPCP) DIMER IN COMPLEX WITH BI-5747
To Be Published
7A4V
DownloadVisualize
BU of 7a4v by Molmil
Crystal structure of lid-truncated ADP-bound BiP in an oligomeric state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Endoplasmic reticulum chaperone BiP, GLYCEROL, ...
Authors:Perera, L.A, Ron, D.
Deposit date:2020-08-20
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Calcium depletion challenges endoplasmic reticulum proteostasis by destabilising BiP-substrate complexes.
Elife, 9, 2020
4N9W
DownloadVisualize
BU of 4n9w by Molmil
Crystal structure of phosphatidyl mannosyltransferase PimA
Descriptor: 1,2-ETHANEDIOL, GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase, GUANOSINE-5'-DIPHOSPHATE
Authors:Giganti, D, Albesa-Jove, D, Bellinzoni, M, Guerin, M.E, Alzari, P.M.
Deposit date:2013-10-21
Release date:2014-11-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Secondary structure reshuffling modulates glycosyltransferase function at the membrane.
Nat.Chem.Biol., 11, 2015
8CQZ
DownloadVisualize
BU of 8cqz by Molmil
Homo sapiens Get3 in complex with the Get1 cytoplasmic domain
Descriptor: ATPase ASNA1, Guided entry of tail-anchored proteins factor 1
Authors:McDowell, M.A, Heimes, M, Wild, K, Saar, D, Sinning, I.
Deposit date:2023-03-07
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
8C87
DownloadVisualize
BU of 8c87 by Molmil
Double mutant A(L172)C/L(L246)C structure of Photosynthetic Reaction Center From Cereibacter sphaeroides strain RV
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, BACTERIOCHLOROPHYLL A, ...
Authors:Gabdulkhakov, A, Selikhanov, G, Fufina, T, Vasilieva, L, Atamas, A, Yukhimchuk, D.
Deposit date:2023-01-19
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Stabilization of Cereibacter sphaeroides Photosynthetic Reaction Center by the Introduction of Disulfide Bonds.
Membranes (Basel), 13, 2023
8CGG
DownloadVisualize
BU of 8cgg by Molmil
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 2)
Descriptor: TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2023-02-04
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:TDP-43 forms amyloid filaments with a distinct fold in type A FTLD-TDP.
Nature, 620, 2023
8CGH
DownloadVisualize
BU of 8cgh by Molmil
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 3)
Descriptor: TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2023-02-04
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:TDP-43 forms amyloid filaments with a distinct fold in type A FTLD-TDP.
Nature, 620, 2023
8CEF
DownloadVisualize
BU of 8cef by Molmil
Asymmetric Dimerization in a Transcription Factor Superfamily is Promoted by Allosteric Interactions with DNA
Descriptor: DNA (26-MER), Nuclear receptor DNA binding domain, ZINC ION
Authors:Patel, A.K.M, Shaik, T.B, McEwen, A.G, Moras, D, Klaholz, B.P, Billas, I.M.L.
Deposit date:2023-02-01
Release date:2023-08-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.486 Å)
Cite:Asymmetric dimerization in a transcription factor superfamily is promoted by allosteric interactions with DNA.
Nucleic Acids Res., 51, 2023

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon